data_6KUW # _model_server_result.job_id RwAQKFbOXvsyFUQjFNa0wg _model_server_result.datetime_utc '2024-10-20 20:39:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6kuw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1201}' # _entry.id 6KUW # _exptl.entry_id 6KUW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 364.502 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (8~{a}~{R},12~{a}~{S},13~{a}~{R})-12-ethylsulfonyl-3-methoxy-5,6,8,8~{a},9,10,11,12~{a},13,13~{a}-decahydroisoquinolino[2,1-g][1,6]naphthyridine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KUW _cell.length_a 74.48 _cell.length_b 78.74 _cell.length_c 190.45 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KUW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 124 1_555 A SG CYS 174 A CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 A SG CYS 446 A CYS 408 1_555 A SG CYS 450 A CYS 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 B SG CYS 96 B CYS 124 1_555 B SG CYS 174 B CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf4 B SG CYS 446 B CYS 408 1_555 B SG CYS 450 B CYS 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C19 H28 N2 O3 S' _chem_comp.formula_weight 364.502 _chem_comp.id E33 _chem_comp.mon_nstd_flag . _chem_comp.name (8~{a}~{R},12~{a}~{S},13~{a}~{R})-12-ethylsulfonyl-3-methoxy-5,6,8,8~{a},9,10,11,12~{a},13,13~{a}-decahydroisoquinolino[2,1-g][1,6]naphthyridine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C13 E33 sing 160 n n C12 C11 E33 sing 161 n n C15 C11 E33 sing 162 n y C15 C16 E33 doub 163 n y O3 C19 E33 sing 164 n n O3 C16 E33 sing 165 n n C13 N2 E33 sing 166 n n C11 C10 E33 doub 167 n y C16 C17 E33 sing 168 n y N2 C9 E33 sing 169 n n N2 C14 E33 sing 170 n n C10 C9 E33 sing 171 n n C10 C18 E33 sing 172 n y C17 C18 E33 doub 173 n y C9 C8 E33 sing 174 n n C14 C6 E33 sing 175 n n C8 C7 E33 sing 176 n n C6 C5 E33 sing 177 n n C6 C7 E33 sing 178 n n C5 C4 E33 sing 179 n n C7 N1 E33 sing 180 n n C4 C3 E33 sing 181 n n N1 C3 E33 sing 182 n n N1 S1 E33 sing 183 n n O1 S1 E33 doub 184 n n S1 O2 E33 doub 185 n n S1 C2 E33 sing 186 n n C1 C2 E33 sing 187 n n C1 H1 E33 sing 188 n n C1 H2 E33 sing 189 n n C1 H3 E33 sing 190 n n C2 H4 E33 sing 191 n n C2 H5 E33 sing 192 n n C3 H6 E33 sing 193 n n C3 H7 E33 sing 194 n n C4 H8 E33 sing 195 n n C4 H9 E33 sing 196 n n C5 H10 E33 sing 197 n n C5 H11 E33 sing 198 n n C6 H12 E33 sing 199 n n C12 H13 E33 sing 200 n n C12 H14 E33 sing 201 n n C13 H15 E33 sing 202 n n C13 H16 E33 sing 203 n n C14 H17 E33 sing 204 n n C14 H18 E33 sing 205 n n C15 H19 E33 sing 206 n n C17 H20 E33 sing 207 n n C7 H21 E33 sing 208 n n C8 H22 E33 sing 209 n n C8 H23 E33 sing 210 n n C9 H24 E33 sing 211 n n C18 H26 E33 sing 212 n n C19 H27 E33 sing 213 n n C19 H28 E33 sing 214 n n C19 H29 E33 sing 215 n n # _atom_sites.entry_id 6KUW _atom_sites.fract_transf_matrix[1][1] 0.013426 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0127 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005251 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 E33 A 1 1201 2002 E33 RS1 . D 3 CLR A 1 1202 2013 CLR CLR . E 4 OLC A 1 1203 2024 OLC OLC . F 4 OLC A 1 1204 2025 OLC OLC . G 4 OLC A 1 1205 2026 OLC OLC . H 4 OLC A 1 1206 2027 OLC OLC . I 4 OLC A 1 1207 2028 OLC OLC . J 5 OLA A 1 1208 2030 OLA OLA . K 5 OLA A 1 1209 2027 OLA OLA . L 2 E33 B 1 1201 2002 E33 RS1 . M 3 CLR B 1 1202 2013 CLR CLR . N 4 OLC B 1 1203 2024 OLC OLC . O 4 OLC B 1 1204 2025 OLC OLC . P 6 HOH A 1 1301 2036 HOH HOH . Q 6 HOH B 1 1301 2036 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 E33 . . . C 2 -30.895 -12.938 60.35 1 77.92 ? C1 E33 1201 A 1 HETATM 2 C C2 E33 . . . C 2 -31.6 -14.271 60.491 1 80.44 ? C2 E33 1201 A 1 HETATM 3 C C3 E33 . . . C 2 -33.812 -15.108 58.08 1 67.63 ? C3 E33 1201 A 1 HETATM 4 C C4 E33 . . . C 2 -34.168 -13.789 57.402 1 66.53 ? C4 E33 1201 A 1 HETATM 5 C C5 E33 . . . C 2 -33.621 -13.663 55.99 1 66.55 ? C5 E33 1201 A 1 HETATM 6 C C6 E33 . . . C 2 -32.147 -14.041 55.8 1 66.74 ? C6 E33 1201 A 1 HETATM 7 C C12 E33 . . . C 2 -32.365 -16.798 51.478 1 61.72 ? C12 E33 1201 A 1 HETATM 8 C C13 E33 . . . C 2 -32.106 -15.409 52.059 1 62.47 ? C13 E33 1201 A 1 HETATM 9 C C14 E33 . . . C 2 -31.799 -14.189 54.318 1 64.81 ? C14 E33 1201 A 1 HETATM 10 C C15 E33 . . . C 2 -31.642 -18.989 51.542 1 52.27 ? C15 E33 1201 A 1 HETATM 11 C C16 E33 . . . C 2 -31.198 -20.089 52.274 1 50.25 ? C16 E33 1201 A 1 HETATM 12 C C17 E33 . . . C 2 -31.063 -20 53.678 1 50.55 ? C17 E33 1201 A 1 HETATM 13 S S1 E33 . . . C 2 -31.206 -15.428 59.137 1 81.9 ? S1 E33 1201 A 1 HETATM 14 O O1 E33 . . . C 2 -29.779 -15.23 58.623 1 81.76 ? O1 E33 1201 A 1 HETATM 15 O O2 E33 . . . C 2 -31.215 -16.86 59.632 1 81.47 ? O2 E33 1201 A 1 HETATM 16 N N1 E33 . . . C 2 -32.347 -15.328 57.865 1 72.86 ? N1 E33 1201 A 1 HETATM 17 C C7 E33 . . . C 2 -31.867 -15.397 56.459 1 68.72 ? C7 E33 1201 A 1 HETATM 18 C C8 E33 . . . C 2 -32.486 -16.489 55.628 1 68.01 ? C8 E33 1201 A 1 HETATM 19 C C9 E33 . . . C 2 -32.388 -16.63 54.094 1 64.96 ? C9 E33 1201 A 1 HETATM 20 C C10 E33 . . . C 2 -31.625 -17.683 53.644 1 58.94 ? C10 E33 1201 A 1 HETATM 21 C C11 E33 . . . C 2 -31.907 -17.832 52.274 1 57.33 ? C11 E33 1201 A 1 HETATM 22 N N2 E33 . . . C 2 -32.403 -15.247 53.495 1 63.6 1 N2 E33 1201 A 1 HETATM 23 C C18 E33 . . . C 2 -31.375 -18.84 54.389 1 52.06 ? C18 E33 1201 A 1 HETATM 24 O O3 E33 . . . C 2 -30.874 -21.248 51.622 1 47.26 ? O3 E33 1201 A 1 HETATM 25 C C19 E33 . . . C 2 -31.874 -22.243 51.767 1 45.03 ? C19 E33 1201 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 39 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 25 #