data_6KWD
#
_model_server_result.job_id            RfdpubzAE0FNU_pGr3NgDA 
_model_server_result.datetime_utc      '2024-11-13 18:53:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6kwd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    6KWD 
#
_exptl.entry_id    6KWD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6KWD 
_cell.length_a            47.598 
_cell.length_b            59.161 
_cell.length_c            69.604 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KWD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 XYP XYP C1 O1 . O4 HO4 . sing 
2 ? 2 3 2 XYP XYP C1 O1 . O4 HO4 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B XYP 1 B 1 XYP A 203 XYP 
2 n B XYP 2 B 2 XYP A 202 XYP 
2 n B XYP 3 B 3 XYP A 201 XYP 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B O4 XYP . B XYP 1 1_555 B C1 XYP . B XYP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? 
covale ? covale2 B O4 XYP . B XYP 2 1_555 B C1 XYP . B XYP 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.391 ? 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6KWD 
_atom_sites.fract_transf_matrix[1][1]    0.021009 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016903 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014367 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 201 204 GOL GOL . 
D 4 IOD A 1 202 1 IOD IOD . 
E 5 HOH A 1 301 236 HOH HOH . 
E 5 HOH A 2 302 245 HOH HOH . 
E 5 HOH A 3 303 83 HOH HOH . 
E 5 HOH A 4 304 243 HOH HOH . 
E 5 HOH A 5 305 158 HOH HOH . 
E 5 HOH A 6 306 92 HOH HOH . 
E 5 HOH A 7 307 197 HOH HOH . 
E 5 HOH A 8 308 105 HOH HOH . 
E 5 HOH A 9 309 186 HOH HOH . 
E 5 HOH A 10 310 88 HOH HOH . 
E 5 HOH A 11 311 165 HOH HOH . 
E 5 HOH A 12 312 181 HOH HOH . 
E 5 HOH A 13 313 238 HOH HOH . 
E 5 HOH A 14 314 203 HOH HOH . 
E 5 HOH A 15 315 28 HOH HOH . 
E 5 HOH A 16 316 212 HOH HOH . 
E 5 HOH A 17 317 90 HOH HOH . 
E 5 HOH A 18 318 198 HOH HOH . 
E 5 HOH A 19 319 120 HOH HOH . 
E 5 HOH A 20 320 37 HOH HOH . 
E 5 HOH A 21 321 170 HOH HOH . 
E 5 HOH A 22 322 39 HOH HOH . 
E 5 HOH A 23 323 122 HOH HOH . 
E 5 HOH A 24 324 46 HOH HOH . 
E 5 HOH A 25 325 76 HOH HOH . 
E 5 HOH A 26 326 32 HOH HOH . 
E 5 HOH A 27 327 61 HOH HOH . 
E 5 HOH A 28 328 190 HOH HOH . 
E 5 HOH A 29 329 16 HOH HOH . 
E 5 HOH A 30 330 199 HOH HOH . 
E 5 HOH A 31 331 208 HOH HOH . 
E 5 HOH A 32 332 152 HOH HOH . 
E 5 HOH A 33 333 187 HOH HOH . 
E 5 HOH A 34 334 5 HOH HOH . 
E 5 HOH A 35 335 182 HOH HOH . 
E 5 HOH A 36 336 240 HOH HOH . 
E 5 HOH A 37 337 234 HOH HOH . 
E 5 HOH A 38 338 210 HOH HOH . 
E 5 HOH A 39 339 207 HOH HOH . 
E 5 HOH A 40 340 12 HOH HOH . 
E 5 HOH A 41 341 19 HOH HOH . 
E 5 HOH A 42 342 127 HOH HOH . 
E 5 HOH A 43 343 179 HOH HOH . 
E 5 HOH A 44 344 104 HOH HOH . 
E 5 HOH A 45 345 15 HOH HOH . 
E 5 HOH A 46 346 45 HOH HOH . 
E 5 HOH A 47 347 178 HOH HOH . 
E 5 HOH A 48 348 159 HOH HOH . 
E 5 HOH A 49 349 3 HOH HOH . 
E 5 HOH A 50 350 155 HOH HOH . 
E 5 HOH A 51 351 101 HOH HOH . 
E 5 HOH A 52 352 13 HOH HOH . 
E 5 HOH A 53 353 7 HOH HOH . 
E 5 HOH A 54 354 168 HOH HOH . 
E 5 HOH A 55 355 6 HOH HOH . 
E 5 HOH A 56 356 142 HOH HOH . 
E 5 HOH A 57 357 34 HOH HOH . 
E 5 HOH A 58 358 48 HOH HOH . 
E 5 HOH A 59 359 21 HOH HOH . 
E 5 HOH A 60 360 192 HOH HOH . 
E 5 HOH A 61 361 80 HOH HOH . 
E 5 HOH A 62 362 40 HOH HOH . 
E 5 HOH A 63 363 183 HOH HOH . 
E 5 HOH A 64 364 112 HOH HOH . 
E 5 HOH A 65 365 125 HOH HOH . 
E 5 HOH A 66 366 128 HOH HOH . 
E 5 HOH A 67 367 54 HOH HOH . 
E 5 HOH A 68 368 47 HOH HOH . 
E 5 HOH A 69 369 62 HOH HOH . 
E 5 HOH A 70 370 91 HOH HOH . 
E 5 HOH A 71 371 188 HOH HOH . 
E 5 HOH A 72 372 68 HOH HOH . 
E 5 HOH A 73 373 124 HOH HOH . 
E 5 HOH A 74 374 235 HOH HOH . 
E 5 HOH A 75 375 22 HOH HOH . 
E 5 HOH A 76 376 26 HOH HOH . 
E 5 HOH A 77 377 224 HOH HOH . 
E 5 HOH A 78 378 1 HOH HOH . 
E 5 HOH A 79 379 44 HOH HOH . 
E 5 HOH A 80 380 229 HOH HOH . 
E 5 HOH A 81 381 150 HOH HOH . 
E 5 HOH A 82 382 29 HOH HOH . 
E 5 HOH A 83 383 79 HOH HOH . 
E 5 HOH A 84 384 133 HOH HOH . 
E 5 HOH A 85 385 59 HOH HOH . 
E 5 HOH A 86 386 31 HOH HOH . 
E 5 HOH A 87 387 2 HOH HOH . 
E 5 HOH A 88 388 123 HOH HOH . 
E 5 HOH A 89 389 99 HOH HOH . 
E 5 HOH A 90 390 231 HOH HOH . 
E 5 HOH A 91 391 102 HOH HOH . 
E 5 HOH A 92 392 111 HOH HOH . 
E 5 HOH A 93 393 43 HOH HOH . 
E 5 HOH A 94 394 157 HOH HOH . 
E 5 HOH A 95 395 174 HOH HOH . 
E 5 HOH A 96 396 69 HOH HOH . 
E 5 HOH A 97 397 189 HOH HOH . 
E 5 HOH A 98 398 4 HOH HOH . 
E 5 HOH A 99 399 228 HOH HOH . 
E 5 HOH A 100 400 84 HOH HOH . 
E 5 HOH A 101 401 75 HOH HOH . 
E 5 HOH A 102 402 85 HOH HOH . 
E 5 HOH A 103 403 166 HOH HOH . 
E 5 HOH A 104 404 161 HOH HOH . 
E 5 HOH A 105 405 67 HOH HOH . 
E 5 HOH A 106 406 51 HOH HOH . 
E 5 HOH A 107 407 86 HOH HOH . 
E 5 HOH A 108 408 30 HOH HOH . 
E 5 HOH A 109 409 42 HOH HOH . 
E 5 HOH A 110 410 50 HOH HOH . 
E 5 HOH A 111 411 41 HOH HOH . 
E 5 HOH A 112 412 74 HOH HOH . 
E 5 HOH A 113 413 164 HOH HOH . 
E 5 HOH A 114 414 218 HOH HOH . 
E 5 HOH A 115 415 167 HOH HOH . 
E 5 HOH A 116 416 58 HOH HOH . 
E 5 HOH A 117 417 9 HOH HOH . 
E 5 HOH A 118 418 71 HOH HOH . 
E 5 HOH A 119 419 130 HOH HOH . 
E 5 HOH A 120 420 35 HOH HOH . 
E 5 HOH A 121 421 195 HOH HOH . 
E 5 HOH A 122 422 103 HOH HOH . 
E 5 HOH A 123 423 65 HOH HOH . 
E 5 HOH A 124 424 132 HOH HOH . 
E 5 HOH A 125 425 25 HOH HOH . 
E 5 HOH A 126 426 73 HOH HOH . 
E 5 HOH A 127 427 200 HOH HOH . 
E 5 HOH A 128 428 64 HOH HOH . 
E 5 HOH A 129 429 156 HOH HOH . 
E 5 HOH A 130 430 121 HOH HOH . 
E 5 HOH A 131 431 213 HOH HOH . 
E 5 HOH A 132 432 162 HOH HOH . 
E 5 HOH A 133 433 180 HOH HOH . 
E 5 HOH A 134 434 119 HOH HOH . 
E 5 HOH A 135 435 56 HOH HOH . 
E 5 HOH A 136 436 193 HOH HOH . 
E 5 HOH A 137 437 129 HOH HOH . 
E 5 HOH A 138 438 78 HOH HOH . 
E 5 HOH A 139 439 14 HOH HOH . 
E 5 HOH A 140 440 230 HOH HOH . 
E 5 HOH A 141 441 53 HOH HOH . 
E 5 HOH A 142 442 17 HOH HOH . 
E 5 HOH A 143 443 108 HOH HOH . 
E 5 HOH A 144 444 66 HOH HOH . 
E 5 HOH A 145 445 163 HOH HOH . 
E 5 HOH A 146 446 55 HOH HOH . 
E 5 HOH A 147 447 201 HOH HOH . 
E 5 HOH A 148 448 82 HOH HOH . 
E 5 HOH A 149 449 63 HOH HOH . 
E 5 HOH A 150 450 95 HOH HOH . 
E 5 HOH A 151 451 24 HOH HOH . 
E 5 HOH A 152 452 149 HOH HOH . 
E 5 HOH A 153 453 77 HOH HOH . 
E 5 HOH A 154 454 205 HOH HOH . 
E 5 HOH A 155 455 98 HOH HOH . 
E 5 HOH A 156 456 106 HOH HOH . 
E 5 HOH A 157 457 232 HOH HOH . 
E 5 HOH A 158 458 52 HOH HOH . 
E 5 HOH A 159 459 118 HOH HOH . 
E 5 HOH A 160 460 36 HOH HOH . 
E 5 HOH A 161 461 23 HOH HOH . 
E 5 HOH A 162 462 131 HOH HOH . 
E 5 HOH A 163 463 136 HOH HOH . 
E 5 HOH A 164 464 214 HOH HOH . 
E 5 HOH A 165 465 11 HOH HOH . 
E 5 HOH A 166 466 57 HOH HOH . 
E 5 HOH A 167 467 27 HOH HOH . 
E 5 HOH A 168 468 244 HOH HOH . 
E 5 HOH A 169 469 114 HOH HOH . 
E 5 HOH A 170 470 89 HOH HOH . 
E 5 HOH A 171 471 140 HOH HOH . 
E 5 HOH A 172 472 191 HOH HOH . 
E 5 HOH A 173 473 81 HOH HOH . 
E 5 HOH A 174 474 172 HOH HOH . 
E 5 HOH A 175 475 209 HOH HOH . 
E 5 HOH A 176 476 20 HOH HOH . 
E 5 HOH A 177 477 242 HOH HOH . 
E 5 HOH A 178 478 177 HOH HOH . 
E 5 HOH A 179 479 93 HOH HOH . 
E 5 HOH A 180 480 215 HOH HOH . 
E 5 HOH A 181 481 196 HOH HOH . 
E 5 HOH A 182 482 219 HOH HOH . 
E 5 HOH A 183 483 138 HOH HOH . 
E 5 HOH A 184 484 116 HOH HOH . 
E 5 HOH A 185 485 202 HOH HOH . 
E 5 HOH A 186 486 153 HOH HOH . 
E 5 HOH A 187 487 113 HOH HOH . 
E 5 HOH A 188 488 194 HOH HOH . 
E 5 HOH A 189 489 137 HOH HOH . 
E 5 HOH A 190 490 220 HOH HOH . 
E 5 HOH A 191 491 173 HOH HOH . 
E 5 HOH A 192 492 169 HOH HOH . 
E 5 HOH A 193 493 147 HOH HOH . 
E 5 HOH A 194 494 115 HOH HOH . 
E 5 HOH A 195 495 211 HOH HOH . 
E 5 HOH A 196 496 217 HOH HOH . 
E 5 HOH A 197 497 227 HOH HOH . 
E 5 HOH A 198 498 171 HOH HOH . 
E 5 HOH A 199 499 223 HOH HOH . 
E 5 HOH A 200 500 134 HOH HOH . 
E 5 HOH A 201 501 87 HOH HOH . 
E 5 HOH A 202 502 8 HOH HOH . 
E 5 HOH A 203 503 94 HOH HOH . 
E 5 HOH A 204 504 176 HOH HOH . 
E 5 HOH A 205 505 222 HOH HOH . 
E 5 HOH A 206 506 148 HOH HOH . 
E 5 HOH A 207 507 110 HOH HOH . 
E 5 HOH A 208 508 226 HOH HOH . 
E 5 HOH A 209 509 237 HOH HOH . 
E 5 HOH A 210 510 206 HOH HOH . 
E 5 HOH A 211 511 225 HOH HOH . 
E 5 HOH A 212 512 175 HOH HOH . 
E 5 HOH A 213 513 139 HOH HOH . 
E 5 HOH A 214 514 241 HOH HOH . 
E 5 HOH A 215 515 117 HOH HOH . 
E 5 HOH A 216 516 38 HOH HOH . 
E 5 HOH A 217 517 107 HOH HOH . 
E 5 HOH A 218 518 96 HOH HOH . 
E 5 HOH A 219 519 135 HOH HOH . 
E 5 HOH A 220 520 216 HOH HOH . 
E 5 HOH A 221 521 154 HOH HOH . 
E 5 HOH A 222 522 160 HOH HOH . 
E 5 HOH A 223 523 233 HOH HOH . 
E 5 HOH A 224 524 72 HOH HOH . 
E 5 HOH A 225 525 204 HOH HOH . 
E 5 HOH A 226 526 126 HOH HOH . 
E 5 HOH A 227 527 100 HOH HOH . 
E 5 HOH A 228 528 151 HOH HOH . 
E 5 HOH A 229 529 185 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               9.915 
_atom_site.Cartn_y               31.693 
_atom_site.Cartn_z               1.652 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        16.48 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           202 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           228 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#