data_6KYL
#
_model_server_result.job_id            IdJYdsWD04VHJsO1V3m-8w 
_model_server_result.datetime_utc      '2024-11-08 03:35:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6kyl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":201}' 
#
_entry.id    6KYL 
#
_exptl.entry_id    6KYL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              368.36 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6KYL 
_cell.length_a            90.14 
_cell.length_b            90.14 
_cell.length_c            81.319 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KYL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E 1 1 
C,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 13 A CYS 13 1_555 A SG CYS 52 A CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 A SG CYS 23 A CYS 23 1_555 A SG CYS 42 A CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf3 C SG CYS 13 C CYS 13 1_555 C SG CYS 52 C CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf4 C SG CYS 23 C CYS 23 1_555 C SG CYS 42 C CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
#
_chem_comp.formula           'C15 H29 O8 P' 
_chem_comp.formula_weight    368.36 
_chem_comp.id                44E 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O22 C21 44E doub 1 n n 
O12 P 44E doub 2 n n 
C1 C2 44E sing 3 n n 
C1 O11 44E sing 4 n n 
C2 C3 44E sing 5 n n 
C2 O21 44E sing 6 n n 
C23 C22 44E sing 7 n n 
C21 O21 44E sing 8 n n 
C21 C22 44E sing 9 n n 
C3 O31 44E sing 10 n n 
O11 P 44E sing 11 n n 
P O14 44E sing 12 n n 
P O13 44E sing 13 n n 
C32 C33 44E sing 14 n n 
C32 C31 44E sing 15 n n 
O31 C31 44E sing 16 n n 
C33 C34 44E sing 17 n n 
C31 O32 44E doub 18 n n 
C34 C35 44E sing 19 n n 
C36 C35 44E sing 20 n n 
O13 H1 44E sing 21 n n 
O14 H2 44E sing 22 n n 
C1 H3 44E sing 23 n n 
C1 H4 44E sing 24 n n 
C2 H5 44E sing 25 n n 
C22 H6 44E sing 26 n n 
C22 H7 44E sing 27 n n 
C23 H8 44E sing 28 n n 
C23 H9 44E sing 29 n n 
C3 H11 44E sing 30 n n 
C3 H12 44E sing 31 n n 
C32 H13 44E sing 32 n n 
C32 H14 44E sing 33 n n 
C33 H15 44E sing 34 n n 
C33 H16 44E sing 35 n n 
C34 H17 44E sing 36 n n 
C34 H18 44E sing 37 n n 
C35 H19 44E sing 38 n n 
C35 H20 44E sing 39 n n 
C36 H21 44E sing 40 n n 
C36 H22 44E sing 41 n n 
C36 H23 44E sing 42 n n 
C23 C4 44E sing 43 n n 
C4 C5 44E sing 44 n n 
C5 C6 44E sing 45 n n 
C4 H10 44E sing 46 n n 
C4 H24 44E sing 47 n n 
C5 H25 44E sing 48 n n 
C5 H26 44E sing 49 n n 
C6 H27 44E sing 50 n n 
C6 H28 44E sing 51 n n 
C6 H29 44E sing 52 n n 
#
_atom_sites.entry_id                     6KYL 
_atom_sites.fract_transf_matrix[1][1]    0.011094 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011094 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012297 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 44E B 1 201 1 44E PX2 . 
F 3 44E D 1 201 2 44E PX2 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O13 44E . . . F 3 19.967 58.903 -3.137 1 51.92 ? O13 44E 201 D 1 
HETATM 2 P P 44E . . . F 3 19.456 59.755 -4.276 1 47.91 ? P 44E 201 D 1 
HETATM 3 O O14 44E . . . F 3 20.438 60.87 -4.548 1 52.4 ? O14 44E 201 D 1 
HETATM 4 O O12 44E . . . F 3 18.118 60.347 -3.901 1 30.12 ? O12 44E 201 D 1 
HETATM 5 O O11 44E . . . F 3 19.288 58.822 -5.626 1 47.21 ? O11 44E 201 D 1 
HETATM 6 C C1 44E . . . F 3 19.49 57.44 -5.514 1 38.91 ? C1 44E 201 D 1 
HETATM 7 C C2 44E . . . F 3 18.636 56.699 -6.544 1 38.13 ? C2 44E 201 D 1 
HETATM 8 O O21 44E . . . F 3 19.29 56.684 -7.781 1 45.93 ? O21 44E 201 D 1 
HETATM 9 C C21 44E . . . F 3 19.672 55.409 -8.216 1 41.86 ? C21 44E 201 D 1 
HETATM 10 O O22 44E . . . F 3 20.306 54.704 -7.504 1 46.57 ? O22 44E 201 D 1 
HETATM 11 C C22 44E . . . F 3 19.269 54.924 -9.608 1 32.56 ? C22 44E 201 D 1 
HETATM 12 C C23 44E . . . F 3 19.938 53.582 -9.897 1 29.71 ? C23 44E 201 D 1 
HETATM 13 C C3 44E . . . F 3 17.286 57.399 -6.696 1 48.61 ? C3 44E 201 D 1 
HETATM 14 O O31 44E . . . F 3 16.591 56.855 -7.783 1 42.71 ? O31 44E 201 D 1 
HETATM 15 C C31 44E . . . F 3 16.174 57.797 -8.733 1 41.99 ? C31 44E 201 D 1 
HETATM 16 O O32 44E . . . F 3 16.569 58.914 -8.682 1 33.81 ? O32 44E 201 D 1 
HETATM 17 C C32 44E . . . F 3 15.206 57.385 -9.841 1 34.65 ? C32 44E 201 D 1 
HETATM 18 C C33 44E . . . F 3 15.695 56.101 -10.511 1 23.07 ? C33 44E 201 D 1 
HETATM 19 C C34 44E . . . F 3 14.737 55.732 -11.642 1 22.76 ? C34 44E 201 D 1 
HETATM 20 C C35 44E . . . F 3 15.198 54.439 -12.313 1 22.57 ? C35 44E 201 D 1 
HETATM 21 C C4 44E . . . F 3 19.353 52.982 -11.174 1 23.94 ? C4 44E 201 D 1 
HETATM 22 C C5 44E . . . F 3 19.254 51.464 -11.031 1 22.91 ? C5 44E 201 D 1 
#
_model_server_stats.io_time_ms              85 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           22 
#