data_6KYP # _model_server_result.job_id QMcrYK6TiBFwWMitf45bMA _model_server_result.datetime_utc '2024-10-31 00:25:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6kyp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":504}' # _entry.id 6KYP # _exptl.entry_id 6KYP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 214.646 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(4-chloranylphenoxy)-2-methyl-propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.15 _cell.angle_gamma 90 _cell.entry_id 6KYP _cell.length_a 60.71 _cell.length_b 102.478 _cell.length_c 61.465 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KYP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F,G,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 80 A CYS 275 1_555 D C9 GW9 . A GW9 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? covale ? covale2 A SG CYS 81 A CYS 276 1_555 C C9 GW9 . A GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? covale ? covale3 A SG CYS 83 A CYS 278 1_555 E C9 GW9 . A GW9 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? covale ? covale4 B SG CYS 80 B CYS 275 1_555 G C9 GW9 . B GW9 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? covale ? covale5 B SG CYS 81 B CYS 276 1_555 F C9 GW9 . B GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? covale ? covale6 B SG CYS 83 B CYS 278 1_555 H C9 GW9 . B GW9 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? # _chem_comp.formula 'C10 H11 Cl O3' _chem_comp.formula_weight 214.646 _chem_comp.id E0O _chem_comp.mon_nstd_flag . _chem_comp.name '2-(4-chloranylphenoxy)-2-methyl-propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O04 C08 E0O doub 83 n n C07 C05 E0O sing 84 n n C08 O03 E0O sing 85 n n C08 C05 E0O sing 86 n n C05 C06 E0O sing 87 n n C05 O02 E0O sing 88 n n O02 C09 E0O sing 89 n n C10 C09 E0O doub 90 n y C10 C12 E0O sing 91 n y C09 C11 E0O sing 92 n y C12 C14 E0O doub 93 n y C11 C13 E0O doub 94 n y C14 C13 E0O sing 95 n y C14 CL1 E0O sing 96 n n C10 H01 E0O sing 97 n n C13 H31 E0O sing 98 n n C06 H62 E0O sing 99 n n C06 H63 E0O sing 100 n n C06 H61 E0O sing 101 n n C07 H73 E0O sing 102 n n C07 H71 E0O sing 103 n n C07 H72 E0O sing 104 n n C11 H11 E0O sing 105 n n C12 H21 E0O sing 106 n n O03 H1 E0O sing 107 n n # _atom_sites.entry_id 6KYP _atom_sites.fract_transf_matrix[1][1] 0.016472 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002949 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009758 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016528 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GW9 A 1 501 1 GW9 GW9 . D 2 GW9 A 1 502 3 GW9 GW9 . E 2 GW9 A 1 503 5 GW9 GW9 . F 2 GW9 B 1 501 2 GW9 GW9 . G 2 GW9 B 1 502 4 GW9 GW9 . H 2 GW9 B 1 503 6 GW9 GW9 . I 3 E0O B 1 504 2 E0O C0F . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 E0O . . . I 3 63.064 37.45 0.5 1 63.41 ? C10 E0O 504 B 1 HETATM 2 C C13 E0O . . . I 3 64.397 36.531 2.742 1 64.5 ? C13 E0O 504 B 1 HETATM 3 C C05 E0O . . . I 3 65.379 37.237 -1.628 1 60.14 ? C05 E0O 504 B 1 HETATM 4 C C06 E0O . . . I 3 66.123 35.958 -1.24 1 60.83 ? C06 E0O 504 B 1 HETATM 5 C C07 E0O . . . I 3 66.224 37.994 -2.649 1 60.99 ? C07 E0O 504 B 1 HETATM 6 C C09 E0O . . . I 3 64.447 37.522 0.555 1 61.17 ? C09 E0O 504 B 1 HETATM 7 C C11 E0O . . . I 3 65.113 37.066 1.682 1 64.62 ? C11 E0O 504 B 1 HETATM 8 C C14 E0O . . . I 3 63.015 36.455 2.677 1 66.19 ? C14 E0O 504 B 1 HETATM 9 C C08 E0O . . . I 3 64.045 36.884 -2.282 1 61.57 ? C08 E0O 504 B 1 HETATM 10 C C12 E0O . . . I 3 62.349 36.913 1.555 1 62.89 ? C12 E0O 504 B 1 HETATM 11 O O02 E0O . . . I 3 65.171 38.068 -0.515 1 56.71 ? O02 E0O 504 B 1 HETATM 12 O O03 E0O . . . I 3 63.46 35.809 -1.984 1 66.27 -1 O03 E0O 504 B 1 HETATM 13 O O04 E0O . . . I 3 63.523 37.675 -3.11 1 65.03 ? O04 E0O 504 B 1 HETATM 14 CL CL1 E0O . . . I 3 62.086 35.768 4.036 1 93.81 ? CL1 E0O 504 B 1 HETATM 15 H H01 E0O . . . I 3 62.615 37.756 -0.255 1 75.97 ? H01 E0O 504 B 1 HETATM 16 H H31 E0O . . . I 3 64.845 36.222 3.496 1 77.27 ? H31 E0O 504 B 1 HETATM 17 H H62 E0O . . . I 3 66.243 35.403 -2.026 1 72.87 ? H62 E0O 504 B 1 HETATM 18 H H63 E0O . . . I 3 65.607 35.472 -0.577 1 72.87 ? H63 E0O 504 B 1 HETATM 19 H H61 E0O . . . I 3 66.99 36.187 -0.871 1 72.87 ? H61 E0O 504 B 1 HETATM 20 H H73 E0O . . . I 3 66.427 37.411 -3.397 1 73.06 ? H73 E0O 504 B 1 HETATM 21 H H71 E0O . . . I 3 67.051 38.285 -2.233 1 73.06 ? H71 E0O 504 B 1 HETATM 22 H H72 E0O . . . I 3 65.732 38.767 -2.966 1 73.06 ? H72 E0O 504 B 1 HETATM 23 H H11 E0O . . . I 3 66.041 37.115 1.726 1 77.42 ? H11 E0O 504 B 1 HETATM 24 H H21 E0O . . . I 3 61.421 36.864 1.511 1 75.35 ? H21 E0O 504 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #