data_6L0V # _model_server_result.job_id v-pd3SYRqVsyTMbv0or-kw _model_server_result.datetime_utc '2024-11-30 12:21:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l0v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":1101}' # _entry.id 6L0V # _exptl.entry_id 6L0V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.54 _cell.angle_gamma 90 _cell.entry_id 6L0V _cell.length_a 89.673 _cell.length_b 31.237 _cell.length_c 128.871 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L0V _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,O,P 1 1 C,D,K,Q,R 2 1 E,F,L,M,S,T 3 1 G,H,N,U,V 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6L0V _atom_sites.fract_transf_matrix[1][1] 0.011152 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000299 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.032013 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007762 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 PEG A 1 1101 1101 PEG PEG . J 4 EDO B 1 301 301 EDO EDO . K 4 EDO C 1 1101 1101 EDO EDO . L 4 EDO E 1 1101 1101 EDO EDO . M 4 EDO E 1 1102 1102 EDO EDO . N 5 PGE G 1 1101 1101 PGE PGE . O 6 HOH A 1 1201 1201 HOH HOH . O 6 HOH A 2 1202 1202 HOH HOH . O 6 HOH A 3 1203 1203 HOH HOH . O 6 HOH A 4 1204 1204 HOH HOH . O 6 HOH A 5 1205 1205 HOH HOH . O 6 HOH A 6 1206 1206 HOH HOH . O 6 HOH A 7 1207 1207 HOH HOH . O 6 HOH A 8 1208 1208 HOH HOH . O 6 HOH A 9 1209 1209 HOH HOH . O 6 HOH A 10 1210 1210 HOH HOH . O 6 HOH A 11 1211 1211 HOH HOH . O 6 HOH A 12 1212 1212 HOH HOH . O 6 HOH A 13 1213 1213 HOH HOH . O 6 HOH A 14 1214 1214 HOH HOH . O 6 HOH A 15 1215 1215 HOH HOH . O 6 HOH A 16 1216 1216 HOH HOH . O 6 HOH A 17 1217 1217 HOH HOH . O 6 HOH A 18 1218 1218 HOH HOH . O 6 HOH A 19 1219 1219 HOH HOH . O 6 HOH A 20 1220 1220 HOH HOH . O 6 HOH A 21 1221 1221 HOH HOH . O 6 HOH A 22 1222 1222 HOH HOH . O 6 HOH A 23 1223 1223 HOH HOH . O 6 HOH A 24 1224 1224 HOH HOH . O 6 HOH A 25 1225 1225 HOH HOH . O 6 HOH A 26 1226 1226 HOH HOH . O 6 HOH A 27 1227 1227 HOH HOH . O 6 HOH A 28 1228 1228 HOH HOH . O 6 HOH A 29 1229 1229 HOH HOH . O 6 HOH A 30 1230 1230 HOH HOH . O 6 HOH A 31 1231 1231 HOH HOH . O 6 HOH A 32 1232 1232 HOH HOH . O 6 HOH A 33 1233 1233 HOH HOH . O 6 HOH A 34 1234 1234 HOH HOH . O 6 HOH A 35 1235 1235 HOH HOH . O 6 HOH A 36 1236 1236 HOH HOH . O 6 HOH A 37 1237 1237 HOH HOH . O 6 HOH A 38 1238 1238 HOH HOH . O 6 HOH A 39 1239 1239 HOH HOH . O 6 HOH A 40 1240 1240 HOH HOH . O 6 HOH A 41 1241 1241 HOH HOH . O 6 HOH A 42 1242 1242 HOH HOH . O 6 HOH A 43 1243 1243 HOH HOH . O 6 HOH A 44 1244 1244 HOH HOH . O 6 HOH A 45 1245 1245 HOH HOH . O 6 HOH A 46 1246 1246 HOH HOH . O 6 HOH A 47 1247 1247 HOH HOH . O 6 HOH A 48 1248 1248 HOH HOH . O 6 HOH A 49 1249 1249 HOH HOH . O 6 HOH A 50 1250 1250 HOH HOH . O 6 HOH A 51 1251 1251 HOH HOH . O 6 HOH A 52 1252 1252 HOH HOH . O 6 HOH A 53 1253 1253 HOH HOH . O 6 HOH A 54 1254 1254 HOH HOH . O 6 HOH A 55 1255 1255 HOH HOH . O 6 HOH A 56 1256 1256 HOH HOH . O 6 HOH A 57 1257 1257 HOH HOH . O 6 HOH A 58 1258 1258 HOH HOH . O 6 HOH A 59 1259 1259 HOH HOH . O 6 HOH A 60 1260 1260 HOH HOH . O 6 HOH A 61 1261 1261 HOH HOH . O 6 HOH A 62 1262 1262 HOH HOH . O 6 HOH A 63 1263 1263 HOH HOH . O 6 HOH A 64 1264 1264 HOH HOH . O 6 HOH A 65 1265 1265 HOH HOH . O 6 HOH A 66 1266 1266 HOH HOH . O 6 HOH A 67 1267 1267 HOH HOH . O 6 HOH A 68 1268 1268 HOH HOH . O 6 HOH A 69 1269 1269 HOH HOH . O 6 HOH A 70 1270 1270 HOH HOH . O 6 HOH A 71 1271 1271 HOH HOH . O 6 HOH A 72 1272 1272 HOH HOH . O 6 HOH A 73 1273 1273 HOH HOH . O 6 HOH A 74 1274 1274 HOH HOH . O 6 HOH A 75 1275 1275 HOH HOH . O 6 HOH A 76 1276 1276 HOH HOH . P 6 HOH B 1 401 401 HOH HOH . P 6 HOH B 2 402 402 HOH HOH . P 6 HOH B 3 403 403 HOH HOH . P 6 HOH B 4 404 404 HOH HOH . P 6 HOH B 5 405 405 HOH HOH . P 6 HOH B 6 406 406 HOH HOH . P 6 HOH B 7 407 407 HOH HOH . P 6 HOH B 8 408 408 HOH HOH . P 6 HOH B 9 409 409 HOH HOH . P 6 HOH B 10 410 410 HOH HOH . P 6 HOH B 11 411 411 HOH HOH . P 6 HOH B 12 412 412 HOH HOH . P 6 HOH B 13 413 413 HOH HOH . P 6 HOH B 14 414 414 HOH HOH . P 6 HOH B 15 415 415 HOH HOH . P 6 HOH B 16 416 416 HOH HOH . P 6 HOH B 17 417 417 HOH HOH . Q 6 HOH C 1 1201 1201 HOH HOH . Q 6 HOH C 2 1202 1202 HOH HOH . Q 6 HOH C 3 1203 1203 HOH HOH . Q 6 HOH C 4 1204 1204 HOH HOH . Q 6 HOH C 5 1205 1205 HOH HOH . Q 6 HOH C 6 1206 1206 HOH HOH . Q 6 HOH C 7 1207 1207 HOH HOH . Q 6 HOH C 8 1208 1208 HOH HOH . Q 6 HOH C 9 1209 1209 HOH HOH . Q 6 HOH C 10 1210 1210 HOH HOH . Q 6 HOH C 11 1211 1211 HOH HOH . Q 6 HOH C 12 1212 1212 HOH HOH . Q 6 HOH C 13 1213 1213 HOH HOH . Q 6 HOH C 14 1214 1214 HOH HOH . Q 6 HOH C 15 1215 1215 HOH HOH . Q 6 HOH C 16 1216 1216 HOH HOH . Q 6 HOH C 17 1217 1217 HOH HOH . Q 6 HOH C 18 1218 1218 HOH HOH . Q 6 HOH C 19 1219 1219 HOH HOH . Q 6 HOH C 20 1220 1220 HOH HOH . Q 6 HOH C 21 1221 1221 HOH HOH . Q 6 HOH C 22 1222 1222 HOH HOH . Q 6 HOH C 23 1223 1223 HOH HOH . Q 6 HOH C 24 1224 1224 HOH HOH . Q 6 HOH C 25 1225 1225 HOH HOH . Q 6 HOH C 26 1226 1226 HOH HOH . Q 6 HOH C 27 1227 1227 HOH HOH . Q 6 HOH C 28 1228 1228 HOH HOH . Q 6 HOH C 29 1229 1229 HOH HOH . Q 6 HOH C 30 1230 1230 HOH HOH . Q 6 HOH C 31 1231 1231 HOH HOH . Q 6 HOH C 32 1232 1232 HOH HOH . Q 6 HOH C 33 1233 1233 HOH HOH . Q 6 HOH C 34 1234 1234 HOH HOH . Q 6 HOH C 35 1235 1235 HOH HOH . Q 6 HOH C 36 1236 1236 HOH HOH . Q 6 HOH C 37 1237 1237 HOH HOH . Q 6 HOH C 38 1238 1238 HOH HOH . Q 6 HOH C 39 1239 1239 HOH HOH . Q 6 HOH C 40 1240 1240 HOH HOH . Q 6 HOH C 41 1241 1241 HOH HOH . Q 6 HOH C 42 1242 1242 HOH HOH . Q 6 HOH C 43 1243 1243 HOH HOH . Q 6 HOH C 44 1244 1244 HOH HOH . Q 6 HOH C 45 1245 1245 HOH HOH . Q 6 HOH C 46 1246 1246 HOH HOH . Q 6 HOH C 47 1247 1247 HOH HOH . Q 6 HOH C 48 1248 1248 HOH HOH . Q 6 HOH C 49 1249 1249 HOH HOH . Q 6 HOH C 50 1250 1250 HOH HOH . Q 6 HOH C 51 1251 1251 HOH HOH . Q 6 HOH C 52 1252 1252 HOH HOH . Q 6 HOH C 53 1253 1253 HOH HOH . Q 6 HOH C 54 1254 1254 HOH HOH . Q 6 HOH C 55 1255 1255 HOH HOH . Q 6 HOH C 56 1256 1256 HOH HOH . Q 6 HOH C 57 1257 1257 HOH HOH . Q 6 HOH C 58 1258 1258 HOH HOH . Q 6 HOH C 59 1259 1259 HOH HOH . Q 6 HOH C 60 1260 1260 HOH HOH . Q 6 HOH C 61 1261 1261 HOH HOH . Q 6 HOH C 62 1262 1262 HOH HOH . Q 6 HOH C 63 1263 1263 HOH HOH . Q 6 HOH C 64 1264 1264 HOH HOH . Q 6 HOH C 65 1265 1265 HOH HOH . Q 6 HOH C 66 1266 1266 HOH HOH . Q 6 HOH C 67 1267 1267 HOH HOH . Q 6 HOH C 68 1268 1268 HOH HOH . Q 6 HOH C 69 1269 1269 HOH HOH . R 6 HOH D 1 301 301 HOH HOH . R 6 HOH D 2 302 302 HOH HOH . R 6 HOH D 3 303 303 HOH HOH . R 6 HOH D 4 304 304 HOH HOH . R 6 HOH D 5 305 305 HOH HOH . R 6 HOH D 6 306 306 HOH HOH . R 6 HOH D 7 307 307 HOH HOH . R 6 HOH D 8 308 308 HOH HOH . R 6 HOH D 9 309 309 HOH HOH . R 6 HOH D 10 310 310 HOH HOH . R 6 HOH D 11 311 311 HOH HOH . R 6 HOH D 12 312 312 HOH HOH . R 6 HOH D 13 313 313 HOH HOH . R 6 HOH D 14 314 314 HOH HOH . R 6 HOH D 15 315 315 HOH HOH . R 6 HOH D 16 316 316 HOH HOH . S 6 HOH E 1 1201 1201 HOH HOH . S 6 HOH E 2 1202 1202 HOH HOH . S 6 HOH E 3 1203 1203 HOH HOH . S 6 HOH E 4 1204 1204 HOH HOH . S 6 HOH E 5 1205 1205 HOH HOH . S 6 HOH E 6 1206 1206 HOH HOH . S 6 HOH E 7 1207 1207 HOH HOH . S 6 HOH E 8 1208 1208 HOH HOH . S 6 HOH E 9 1209 1209 HOH HOH . S 6 HOH E 10 1210 1210 HOH HOH . S 6 HOH E 11 1211 1211 HOH HOH . S 6 HOH E 12 1212 1212 HOH HOH . S 6 HOH E 13 1213 1213 HOH HOH . S 6 HOH E 14 1214 1214 HOH HOH . S 6 HOH E 15 1215 1215 HOH HOH . S 6 HOH E 16 1216 1216 HOH HOH . S 6 HOH E 17 1217 1217 HOH HOH . S 6 HOH E 18 1218 1218 HOH HOH . S 6 HOH E 19 1219 1219 HOH HOH . S 6 HOH E 20 1220 1220 HOH HOH . S 6 HOH E 21 1221 1221 HOH HOH . S 6 HOH E 22 1222 1222 HOH HOH . S 6 HOH E 23 1223 1223 HOH HOH . S 6 HOH E 24 1224 1224 HOH HOH . S 6 HOH E 25 1225 1225 HOH HOH . S 6 HOH E 26 1226 1226 HOH HOH . S 6 HOH E 27 1227 1227 HOH HOH . S 6 HOH E 28 1228 1228 HOH HOH . S 6 HOH E 29 1229 1229 HOH HOH . S 6 HOH E 30 1230 1230 HOH HOH . S 6 HOH E 31 1231 1231 HOH HOH . T 6 HOH F 1 301 301 HOH HOH . T 6 HOH F 2 302 302 HOH HOH . T 6 HOH F 3 303 303 HOH HOH . T 6 HOH F 4 304 304 HOH HOH . T 6 HOH F 5 305 305 HOH HOH . T 6 HOH F 6 306 306 HOH HOH . T 6 HOH F 7 307 307 HOH HOH . T 6 HOH F 8 308 308 HOH HOH . T 6 HOH F 9 309 309 HOH HOH . T 6 HOH F 10 310 310 HOH HOH . T 6 HOH F 11 311 311 HOH HOH . T 6 HOH F 12 312 312 HOH HOH . T 6 HOH F 13 313 313 HOH HOH . T 6 HOH F 14 314 314 HOH HOH . T 6 HOH F 15 315 315 HOH HOH . T 6 HOH F 16 316 316 HOH HOH . T 6 HOH F 17 317 317 HOH HOH . T 6 HOH F 18 318 318 HOH HOH . T 6 HOH F 19 319 319 HOH HOH . T 6 HOH F 20 320 320 HOH HOH . T 6 HOH F 21 321 321 HOH HOH . T 6 HOH F 22 322 322 HOH HOH . T 6 HOH F 23 323 323 HOH HOH . U 6 HOH G 1 1201 1201 HOH HOH . U 6 HOH G 2 1202 1202 HOH HOH . U 6 HOH G 3 1203 1203 HOH HOH . U 6 HOH G 4 1204 1204 HOH HOH . U 6 HOH G 5 1205 1205 HOH HOH . U 6 HOH G 6 1206 1206 HOH HOH . U 6 HOH G 7 1207 1207 HOH HOH . U 6 HOH G 8 1208 1208 HOH HOH . U 6 HOH G 9 1209 1209 HOH HOH . U 6 HOH G 10 1210 1210 HOH HOH . U 6 HOH G 11 1211 1211 HOH HOH . U 6 HOH G 12 1212 1212 HOH HOH . U 6 HOH G 13 1213 1213 HOH HOH . U 6 HOH G 14 1214 1214 HOH HOH . U 6 HOH G 15 1215 1215 HOH HOH . U 6 HOH G 16 1216 1216 HOH HOH . U 6 HOH G 17 1217 1217 HOH HOH . U 6 HOH G 18 1218 1218 HOH HOH . U 6 HOH G 19 1219 1219 HOH HOH . U 6 HOH G 20 1220 1220 HOH HOH . U 6 HOH G 21 1221 1221 HOH HOH . U 6 HOH G 22 1222 1222 HOH HOH . U 6 HOH G 23 1223 1223 HOH HOH . U 6 HOH G 24 1224 1224 HOH HOH . U 6 HOH G 25 1225 1225 HOH HOH . U 6 HOH G 26 1226 1226 HOH HOH . U 6 HOH G 27 1227 1227 HOH HOH . U 6 HOH G 28 1228 1228 HOH HOH . U 6 HOH G 29 1229 1229 HOH HOH . U 6 HOH G 30 1230 1230 HOH HOH . U 6 HOH G 31 1231 1231 HOH HOH . U 6 HOH G 32 1232 1232 HOH HOH . U 6 HOH G 33 1233 1233 HOH HOH . U 6 HOH G 34 1234 1234 HOH HOH . V 6 HOH H 1 301 301 HOH HOH . V 6 HOH H 2 302 302 HOH HOH . V 6 HOH H 3 303 303 HOH HOH . V 6 HOH H 4 304 304 HOH HOH . V 6 HOH H 5 305 305 HOH HOH . V 6 HOH H 6 306 306 HOH HOH . V 6 HOH H 7 307 307 HOH HOH . V 6 HOH H 8 308 308 HOH HOH . V 6 HOH H 9 309 309 HOH HOH . V 6 HOH H 10 310 310 HOH HOH . V 6 HOH H 11 311 311 HOH HOH . V 6 HOH H 12 312 312 HOH HOH . V 6 HOH H 13 313 313 HOH HOH . V 6 HOH H 14 314 314 HOH HOH . V 6 HOH H 15 315 315 HOH HOH . V 6 HOH H 16 316 316 HOH HOH . V 6 HOH H 17 317 317 HOH HOH . V 6 HOH H 18 318 318 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . L 4 94.99 9.352 96.848 1 51.2 ? C1 EDO 1101 E 1 HETATM 2 O O1 EDO . . . L 4 95.936 10.211 96.201 1 53.76 ? O1 EDO 1101 E 1 HETATM 3 C C2 EDO . . . L 4 95.202 7.936 96.337 1 52.4 ? C2 EDO 1101 E 1 HETATM 4 O O2 EDO . . . L 4 94.624 6.978 97.227 1 53.46 ? O2 EDO 1101 E 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #