data_6L0X # _model_server_result.job_id futaydeaiQ8mwBt5E2vgCQ _model_server_result.datetime_utc '2024-12-26 21:05:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l0x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 6L0X # _exptl.entry_id 6L0X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 84.99 _cell.angle_beta 88.22 _cell.angle_gamma 82.84 _cell.entry_id 6L0X _cell.length_a 25.346 _cell.length_b 32.019 _cell.length_c 47.35 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L0X _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,I 1 1 B,D,E,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 6L0X _atom_sites.fract_transf_matrix[1][1] 0.039454 _atom_sites.fract_transf_matrix[1][2] -0.004953 _atom_sites.fract_transf_matrix[1][3] -0.00081 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.031477 _atom_sites.fract_transf_matrix[2][3] -0.002659 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021205 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT A 1 101 4 CIT CIT . D 2 CIT B 1 101 1 CIT CIT . E 2 CIT B 1 102 2 CIT CIT . F 2 CIT B 1 103 3 CIT CIT . G 3 GOL B 1 104 1 GOL GOL . H 3 GOL B 1 105 2 GOL GOL . I 4 HOH A 1 201 223 HOH HOH . I 4 HOH A 2 202 163 HOH HOH . I 4 HOH A 3 203 45 HOH HOH . I 4 HOH A 4 204 19 HOH HOH . I 4 HOH A 5 205 190 HOH HOH . I 4 HOH A 6 206 164 HOH HOH . I 4 HOH A 7 207 51 HOH HOH . I 4 HOH A 8 208 130 HOH HOH . I 4 HOH A 9 209 178 HOH HOH . I 4 HOH A 10 210 187 HOH HOH . I 4 HOH A 11 211 56 HOH HOH . I 4 HOH A 12 212 110 HOH HOH . I 4 HOH A 13 213 77 HOH HOH . I 4 HOH A 14 214 34 HOH HOH . I 4 HOH A 15 215 155 HOH HOH . I 4 HOH A 16 216 1 HOH HOH . I 4 HOH A 17 217 93 HOH HOH . I 4 HOH A 18 218 52 HOH HOH . I 4 HOH A 19 219 53 HOH HOH . I 4 HOH A 20 220 3 HOH HOH . I 4 HOH A 21 221 40 HOH HOH . I 4 HOH A 22 222 117 HOH HOH . I 4 HOH A 23 223 81 HOH HOH . I 4 HOH A 24 224 224 HOH HOH . I 4 HOH A 25 225 146 HOH HOH . I 4 HOH A 26 226 48 HOH HOH . I 4 HOH A 27 227 186 HOH HOH . I 4 HOH A 28 228 86 HOH HOH . I 4 HOH A 29 229 184 HOH HOH . I 4 HOH A 30 230 83 HOH HOH . I 4 HOH A 31 231 72 HOH HOH . I 4 HOH A 32 232 105 HOH HOH . I 4 HOH A 33 233 126 HOH HOH . I 4 HOH A 34 234 46 HOH HOH . I 4 HOH A 35 235 42 HOH HOH . I 4 HOH A 36 236 67 HOH HOH . I 4 HOH A 37 237 14 HOH HOH . I 4 HOH A 38 238 20 HOH HOH . I 4 HOH A 39 239 8 HOH HOH . I 4 HOH A 40 240 70 HOH HOH . I 4 HOH A 41 241 13 HOH HOH . I 4 HOH A 42 242 122 HOH HOH . I 4 HOH A 43 243 107 HOH HOH . I 4 HOH A 44 244 31 HOH HOH . I 4 HOH A 45 245 109 HOH HOH . I 4 HOH A 46 246 125 HOH HOH . I 4 HOH A 47 247 58 HOH HOH . I 4 HOH A 48 248 36 HOH HOH . I 4 HOH A 49 249 182 HOH HOH . I 4 HOH A 50 250 63 HOH HOH . I 4 HOH A 51 251 61 HOH HOH . I 4 HOH A 52 252 41 HOH HOH . I 4 HOH A 53 253 85 HOH HOH . I 4 HOH A 54 254 27 HOH HOH . I 4 HOH A 55 255 87 HOH HOH . I 4 HOH A 56 256 102 HOH HOH . I 4 HOH A 57 257 55 HOH HOH . I 4 HOH A 58 258 132 HOH HOH . I 4 HOH A 59 259 38 HOH HOH . I 4 HOH A 60 260 94 HOH HOH . I 4 HOH A 61 261 66 HOH HOH . I 4 HOH A 62 262 229 HOH HOH . I 4 HOH A 63 263 198 HOH HOH . I 4 HOH A 64 264 62 HOH HOH . I 4 HOH A 65 265 133 HOH HOH . I 4 HOH A 66 266 35 HOH HOH . I 4 HOH A 67 267 104 HOH HOH . I 4 HOH A 68 268 33 HOH HOH . I 4 HOH A 69 269 179 HOH HOH . I 4 HOH A 70 270 194 HOH HOH . I 4 HOH A 71 271 170 HOH HOH . I 4 HOH A 72 272 98 HOH HOH . I 4 HOH A 73 273 28 HOH HOH . I 4 HOH A 74 274 147 HOH HOH . I 4 HOH A 75 275 240 HOH HOH . I 4 HOH A 76 276 227 HOH HOH . I 4 HOH A 77 277 231 HOH HOH . I 4 HOH A 78 278 54 HOH HOH . I 4 HOH A 79 279 116 HOH HOH . I 4 HOH A 80 280 173 HOH HOH . I 4 HOH A 81 281 252 HOH HOH . I 4 HOH A 82 282 90 HOH HOH . I 4 HOH A 83 283 129 HOH HOH . I 4 HOH A 84 284 154 HOH HOH . I 4 HOH A 85 285 143 HOH HOH . I 4 HOH A 86 286 183 HOH HOH . I 4 HOH A 87 287 84 HOH HOH . I 4 HOH A 88 288 172 HOH HOH . I 4 HOH A 89 289 103 HOH HOH . I 4 HOH A 90 290 188 HOH HOH . I 4 HOH A 91 291 166 HOH HOH . I 4 HOH A 92 292 239 HOH HOH . I 4 HOH A 93 293 96 HOH HOH . I 4 HOH A 94 294 139 HOH HOH . I 4 HOH A 95 295 158 HOH HOH . I 4 HOH A 96 296 73 HOH HOH . I 4 HOH A 97 297 156 HOH HOH . I 4 HOH A 98 298 171 HOH HOH . I 4 HOH A 99 299 180 HOH HOH . J 4 HOH B 1 201 114 HOH HOH . J 4 HOH B 2 202 74 HOH HOH . J 4 HOH B 3 203 115 HOH HOH . J 4 HOH B 4 204 113 HOH HOH . J 4 HOH B 5 205 75 HOH HOH . J 4 HOH B 6 206 120 HOH HOH . J 4 HOH B 7 207 71 HOH HOH . J 4 HOH B 8 208 68 HOH HOH . J 4 HOH B 9 209 29 HOH HOH . J 4 HOH B 10 210 65 HOH HOH . J 4 HOH B 11 211 80 HOH HOH . J 4 HOH B 12 212 145 HOH HOH . J 4 HOH B 13 213 6 HOH HOH . J 4 HOH B 14 214 100 HOH HOH . J 4 HOH B 15 215 210 HOH HOH . J 4 HOH B 16 216 16 HOH HOH . J 4 HOH B 17 217 135 HOH HOH . J 4 HOH B 18 218 91 HOH HOH . J 4 HOH B 19 219 30 HOH HOH . J 4 HOH B 20 220 44 HOH HOH . J 4 HOH B 21 221 92 HOH HOH . J 4 HOH B 22 222 49 HOH HOH . J 4 HOH B 23 223 131 HOH HOH . J 4 HOH B 24 224 15 HOH HOH . J 4 HOH B 25 225 7 HOH HOH . J 4 HOH B 26 226 144 HOH HOH . J 4 HOH B 27 227 202 HOH HOH . J 4 HOH B 28 228 150 HOH HOH . J 4 HOH B 29 229 111 HOH HOH . J 4 HOH B 30 230 118 HOH HOH . J 4 HOH B 31 231 138 HOH HOH . J 4 HOH B 32 232 21 HOH HOH . J 4 HOH B 33 233 123 HOH HOH . J 4 HOH B 34 234 2 HOH HOH . J 4 HOH B 35 235 25 HOH HOH . J 4 HOH B 36 236 88 HOH HOH . J 4 HOH B 37 237 17 HOH HOH . J 4 HOH B 38 238 95 HOH HOH . J 4 HOH B 39 239 47 HOH HOH . J 4 HOH B 40 240 22 HOH HOH . J 4 HOH B 41 241 39 HOH HOH . J 4 HOH B 42 242 140 HOH HOH . J 4 HOH B 43 243 18 HOH HOH . J 4 HOH B 44 244 197 HOH HOH . J 4 HOH B 45 245 149 HOH HOH . J 4 HOH B 46 246 32 HOH HOH . J 4 HOH B 47 247 57 HOH HOH . J 4 HOH B 48 248 5 HOH HOH . J 4 HOH B 49 249 97 HOH HOH . J 4 HOH B 50 250 201 HOH HOH . J 4 HOH B 51 251 79 HOH HOH . J 4 HOH B 52 252 121 HOH HOH . J 4 HOH B 53 253 26 HOH HOH . J 4 HOH B 54 254 12 HOH HOH . J 4 HOH B 55 255 64 HOH HOH . J 4 HOH B 56 256 37 HOH HOH . J 4 HOH B 57 257 50 HOH HOH . J 4 HOH B 58 258 167 HOH HOH . J 4 HOH B 59 259 60 HOH HOH . J 4 HOH B 60 260 10 HOH HOH . J 4 HOH B 61 261 213 HOH HOH . J 4 HOH B 62 262 9 HOH HOH . J 4 HOH B 63 263 168 HOH HOH . J 4 HOH B 64 264 169 HOH HOH . J 4 HOH B 65 265 211 HOH HOH . J 4 HOH B 66 266 24 HOH HOH . J 4 HOH B 67 267 119 HOH HOH . J 4 HOH B 68 268 174 HOH HOH . J 4 HOH B 69 269 136 HOH HOH . J 4 HOH B 70 270 78 HOH HOH . J 4 HOH B 71 271 151 HOH HOH . J 4 HOH B 72 272 191 HOH HOH . J 4 HOH B 73 273 112 HOH HOH . J 4 HOH B 74 274 189 HOH HOH . J 4 HOH B 75 275 137 HOH HOH . J 4 HOH B 76 276 59 HOH HOH . J 4 HOH B 77 277 222 HOH HOH . J 4 HOH B 78 278 159 HOH HOH . J 4 HOH B 79 279 253 HOH HOH . J 4 HOH B 80 280 200 HOH HOH . J 4 HOH B 81 281 228 HOH HOH . J 4 HOH B 82 282 160 HOH HOH . J 4 HOH B 83 283 175 HOH HOH . J 4 HOH B 84 284 177 HOH HOH . J 4 HOH B 85 285 206 HOH HOH . J 4 HOH B 86 286 153 HOH HOH . J 4 HOH B 87 287 69 HOH HOH . J 4 HOH B 88 288 162 HOH HOH . J 4 HOH B 89 289 192 HOH HOH . J 4 HOH B 90 290 221 HOH HOH . J 4 HOH B 91 291 124 HOH HOH . J 4 HOH B 92 292 225 HOH HOH . J 4 HOH B 93 293 165 HOH HOH . J 4 HOH B 94 294 128 HOH HOH . J 4 HOH B 95 295 195 HOH HOH . J 4 HOH B 96 296 23 HOH HOH . J 4 HOH B 97 297 152 HOH HOH . J 4 HOH B 98 298 148 HOH HOH . J 4 HOH B 99 299 99 HOH HOH . J 4 HOH B 100 300 89 HOH HOH . J 4 HOH B 101 301 209 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . D 2 6.196 31.096 10.369 1 44.86 ? C1 CIT 101 B 1 HETATM 2 O O1 CIT . . . D 2 6.274 31.96 9.462 1 20.58 ? O1 CIT 101 B 1 HETATM 3 O O2 CIT . . . D 2 6.21 29.885 10.045 1 20.89 ? O2 CIT 101 B 1 HETATM 4 C C2 CIT . . . D 2 6.101 31.51 11.825 1 29.7 ? C2 CIT 101 B 1 HETATM 5 C C3 CIT . . . D 2 4.688 31.304 12.366 1 18.56 ? C3 CIT 101 B 1 HETATM 6 O O7 CIT . . . D 2 3.741 31.804 11.387 1 24.33 ? O7 CIT 101 B 1 HETATM 7 C C4 CIT . . . D 2 4.315 29.839 12.592 1 18.69 ? C4 CIT 101 B 1 HETATM 8 C C5 CIT . . . D 2 5.062 29.234 13.756 1 19.34 ? C5 CIT 101 B 1 HETATM 9 O O3 CIT . . . D 2 6.21 28.752 13.605 1 20.64 ? O3 CIT 101 B 1 HETATM 10 O O4 CIT . . . D 2 4.515 29.199 14.879 1 22.96 ? O4 CIT 101 B 1 HETATM 11 C C6 CIT . . . D 2 4.494 32.131 13.63 1 19.17 ? C6 CIT 101 B 1 HETATM 12 O O5 CIT . . . D 2 3.374 32.632 13.865 1 19.35 ? O5 CIT 101 B 1 HETATM 13 O O6 CIT . . . D 2 5.426 32.345 14.441 1 17.92 ? O6 CIT 101 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #