data_6L12 # _model_server_result.job_id JI0ljNJqIxeFZYYrS8LMcQ _model_server_result.datetime_utc '2024-11-26 05:28:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l12 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6L12 # _exptl.entry_id 6L12 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.836 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(2-chloranylphenoxazin-10-yl)methyl]cyclohexan-1-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6L12 _cell.length_a 98.639 _cell.length_b 98.639 _cell.length_c 80.612 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L12 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 236 A SER 260 1_555 A N SEP 237 A SEP 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C SEP 237 A SEP 261 1_555 A N GLU 238 A GLU 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C19 H21 Cl N2 O' _chem_comp.formula_weight 328.836 _chem_comp.id E2R _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(2-chloranylphenoxazin-10-yl)methyl]cyclohexan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N23 C22 E2R sing 83 n n C17 C22 E2R sing 84 n n C17 C18 E2R sing 85 n n C22 C21 E2R sing 86 n n C18 C19 E2R sing 87 n n C21 C20 E2R sing 88 n n C19 C20 E2R sing 89 n n C19 C1 E2R sing 90 n n C1 N2 E2R sing 91 n n N2 C11 E2R sing 92 n n N2 C3 E2R sing 93 n n CL1 C13 E2R sing 94 n n C12 C11 E2R doub 95 n y C12 C13 E2R sing 96 n y C4 C3 E2R doub 97 n y C4 C5 E2R sing 98 n y C11 C10 E2R sing 99 n y C13 C14 E2R doub 100 n y C3 C8 E2R sing 101 n y C5 C6 E2R doub 102 n y C10 O9 E2R sing 103 n n C10 C15 E2R doub 104 n y C8 O9 E2R sing 105 n n C8 C7 E2R doub 106 n y C14 C15 E2R sing 107 n y C6 C7 E2R sing 108 n y C4 H1 E2R sing 109 n n C5 H2 E2R sing 110 n n C6 H3 E2R sing 111 n n C7 H4 E2R sing 112 n n C15 H5 E2R sing 113 n n C17 H6 E2R sing 114 n n C17 H7 E2R sing 115 n n C20 H8 E2R sing 116 n n C20 H9 E2R sing 117 n n C21 H10 E2R sing 118 n n C21 H11 E2R sing 119 n n C22 H12 E2R sing 120 n n C1 H13 E2R sing 121 n n C1 H14 E2R sing 122 n n C19 H15 E2R sing 123 n n C12 H16 E2R sing 124 n n C14 H17 E2R sing 125 n n N23 H18 E2R sing 126 n n N23 H20 E2R sing 127 n n C18 H21 E2R sing 128 n n C18 H22 E2R sing 129 n n # _atom_sites.entry_id 6L12 _atom_sites.fract_transf_matrix[1][1] 0.010138 _atom_sites.fract_transf_matrix[1][2] 0.005853 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011706 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012405 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 E2R A 1 401 1 E2R LIG . C 3 HOH A 1 501 16 HOH HOH . C 3 HOH A 2 502 23 HOH HOH . C 3 HOH A 3 503 1 HOH HOH . C 3 HOH A 4 504 13 HOH HOH . C 3 HOH A 5 505 21 HOH HOH . C 3 HOH A 6 506 38 HOH HOH . C 3 HOH A 7 507 12 HOH HOH . C 3 HOH A 8 508 24 HOH HOH . C 3 HOH A 9 509 9 HOH HOH . C 3 HOH A 10 510 20 HOH HOH . C 3 HOH A 11 511 19 HOH HOH . C 3 HOH A 12 512 30 HOH HOH . C 3 HOH A 13 513 4 HOH HOH . C 3 HOH A 14 514 3 HOH HOH . C 3 HOH A 15 515 33 HOH HOH . C 3 HOH A 16 516 18 HOH HOH . C 3 HOH A 17 517 27 HOH HOH . C 3 HOH A 18 518 28 HOH HOH . C 3 HOH A 19 519 37 HOH HOH . C 3 HOH A 20 520 14 HOH HOH . C 3 HOH A 21 521 39 HOH HOH . C 3 HOH A 22 522 32 HOH HOH . C 3 HOH A 23 523 11 HOH HOH . C 3 HOH A 24 524 6 HOH HOH . C 3 HOH A 25 525 34 HOH HOH . C 3 HOH A 26 526 17 HOH HOH . C 3 HOH A 27 527 15 HOH HOH . C 3 HOH A 28 528 25 HOH HOH . C 3 HOH A 29 529 10 HOH HOH . C 3 HOH A 30 530 36 HOH HOH . C 3 HOH A 31 531 5 HOH HOH . C 3 HOH A 32 532 42 HOH HOH . C 3 HOH A 33 533 29 HOH HOH . C 3 HOH A 34 534 7 HOH HOH . C 3 HOH A 35 535 8 HOH HOH . C 3 HOH A 36 536 41 HOH HOH . C 3 HOH A 37 537 31 HOH HOH . C 3 HOH A 38 538 2 HOH HOH . C 3 HOH A 39 539 22 HOH HOH . C 3 HOH A 40 540 35 HOH HOH . C 3 HOH A 41 541 40 HOH HOH . C 3 HOH A 42 542 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 E2R . . . B 2 16.865 -34.544 -0.928 1 36.95 ? C4 E2R 401 A 1 HETATM 2 C C5 E2R . . . B 2 15.998 -33.926 -0.147 1 37.48 ? C5 E2R 401 A 1 HETATM 3 C C6 E2R . . . B 2 15.849 -34.319 1.302 1 34.44 ? C6 E2R 401 A 1 HETATM 4 C C7 E2R . . . B 2 16.591 -35.281 1.781 1 33.95 ? C7 E2R 401 A 1 HETATM 5 C C8 E2R . . . B 2 17.586 -35.999 0.915 1 34.03 ? C8 E2R 401 A 1 HETATM 6 C C10 E2R . . . B 2 19.221 -37.707 0.851 1 36.61 ? C10 E2R 401 A 1 HETATM 7 C C13 E2R . . . B 2 21.117 -39.281 -0.381 1 41.03 ? C13 E2R 401 A 1 HETATM 8 C C15 E2R . . . B 2 19.909 -38.765 1.653 1 35.44 ? C15 E2R 401 A 1 HETATM 9 C C17 E2R . . . B 2 17.716 -36.48 -6.149 1 48.92 ? C17 E2R 401 A 1 HETATM 10 C C20 E2R . . . B 2 18.027 -38.112 -3.681 1 45.54 ? C20 E2R 401 A 1 HETATM 11 C C21 E2R . . . B 2 17.224 -38.503 -4.915 1 48.62 ? C21 E2R 401 A 1 HETATM 12 C C22 E2R . . . B 2 16.582 -37.248 -5.481 1 50.13 ? C22 E2R 401 A 1 HETATM 13 C C1 E2R . . . B 2 19.003 -36.05 -2.607 1 41.22 ? C1 E2R 401 A 1 HETATM 14 N N2 E2R . . . B 2 18.747 -36.447 -1.202 1 37.4 ? N2 E2R 401 A 1 HETATM 15 C C19 E2R . . . B 2 18.971 -36.93 -3.86 1 45.21 ? C19 E2R 401 A 1 HETATM 16 C C11 E2R . . . B 2 19.497 -37.511 -0.436 1 35.93 ? C11 E2R 401 A 1 HETATM 17 C C3 E2R . . . B 2 17.732 -35.674 -0.366 1 34.67 ? C3 E2R 401 A 1 HETATM 18 C C12 E2R . . . B 2 20.523 -38.368 -1.099 1 37.38 ? C12 E2R 401 A 1 HETATM 19 CL CL1 E2R . . . B 2 22.316 -40.318 -1.147 1 63.72 ? CL1 E2R 401 A 1 HETATM 20 C C14 E2R . . . B 2 20.797 -39.51 1.071 1 39.23 ? C14 E2R 401 A 1 HETATM 21 N N23 E2R . . . B 2 15.462 -37.551 -6.391 1 48.42 ? N23 E2R 401 A 1 HETATM 22 C C18 E2R . . . B 2 18.727 -35.991 -5.102 1 47.36 ? C18 E2R 401 A 1 HETATM 23 O O9 E2R . . . B 2 18.321 -36.957 1.438 1 35.3 ? O9 E2R 401 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #