data_6L1N # _model_server_result.job_id jRdO8ZjYXeVMZipY8zXszg _model_server_result.datetime_utc '2025-04-19 11:10:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l1n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6L1N # _exptl.entry_id 6L1N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 75.067 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.86 _cell.angle_gamma 90 _cell.entry_id 6L1N _cell.length_a 71.29 _cell.length_b 56.91 _cell.length_c 78.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L1N _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C2 H5 N O2' _chem_comp.formula_weight 75.067 _chem_comp.id GLY _chem_comp.mon_nstd_flag y _chem_comp.name GLYCINE _chem_comp.type 'peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA GLY sing 120 n n N H GLY sing 121 n n N H2 GLY sing 122 n n CA C GLY sing 123 n n CA HA2 GLY sing 124 n n CA HA3 GLY sing 125 n n C O GLY doub 126 n n C OXT GLY sing 127 n n OXT HXT GLY sing 128 n n # _atom_sites.entry_id 6L1N _atom_sites.fract_transf_matrix[1][1] 0.014027 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001936 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017572 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01286 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GLY A 1 401 1 GLY GLY . D 3 PLP A 1 402 3 PLP PLP . E 3 PLP B 1 401 4 PLP PLP . F 2 GLY B 1 402 2 GLY GLY . G 4 HOH A 1 501 457 HOH HOH . G 4 HOH A 2 502 412 HOH HOH . G 4 HOH A 3 503 466 HOH HOH . G 4 HOH A 4 504 445 HOH HOH . G 4 HOH A 5 505 421 HOH HOH . G 4 HOH A 6 506 419 HOH HOH . G 4 HOH A 7 507 422 HOH HOH . G 4 HOH A 8 508 464 HOH HOH . G 4 HOH A 9 509 438 HOH HOH . G 4 HOH A 10 510 407 HOH HOH . G 4 HOH A 11 511 415 HOH HOH . G 4 HOH A 12 512 474 HOH HOH . G 4 HOH A 13 513 423 HOH HOH . G 4 HOH A 14 514 435 HOH HOH . G 4 HOH A 15 515 426 HOH HOH . G 4 HOH A 16 516 472 HOH HOH . G 4 HOH A 17 517 442 HOH HOH . G 4 HOH A 18 518 468 HOH HOH . G 4 HOH A 19 519 449 HOH HOH . G 4 HOH A 20 520 427 HOH HOH . G 4 HOH A 21 521 441 HOH HOH . G 4 HOH A 22 522 491 HOH HOH . G 4 HOH A 23 523 479 HOH HOH . G 4 HOH A 24 524 431 HOH HOH . G 4 HOH A 25 525 471 HOH HOH . G 4 HOH A 26 526 416 HOH HOH . G 4 HOH A 27 527 425 HOH HOH . G 4 HOH A 28 528 448 HOH HOH . G 4 HOH A 29 529 443 HOH HOH . G 4 HOH A 30 530 487 HOH HOH . G 4 HOH A 31 531 410 HOH HOH . G 4 HOH A 32 532 439 HOH HOH . G 4 HOH A 33 533 401 HOH HOH . G 4 HOH A 34 534 414 HOH HOH . G 4 HOH A 35 535 433 HOH HOH . G 4 HOH A 36 536 444 HOH HOH . G 4 HOH A 37 537 437 HOH HOH . G 4 HOH A 38 538 424 HOH HOH . G 4 HOH A 39 539 428 HOH HOH . G 4 HOH A 40 540 475 HOH HOH . G 4 HOH A 41 541 469 HOH HOH . G 4 HOH A 42 542 447 HOH HOH . G 4 HOH A 43 543 476 HOH HOH . G 4 HOH A 44 544 497 HOH HOH . G 4 HOH A 45 545 397 HOH HOH . G 4 HOH A 46 546 465 HOH HOH . G 4 HOH A 47 547 405 HOH HOH . G 4 HOH A 48 548 399 HOH HOH . G 4 HOH A 49 549 395 HOH HOH . G 4 HOH A 50 550 418 HOH HOH . G 4 HOH A 51 551 402 HOH HOH . G 4 HOH A 52 552 430 HOH HOH . G 4 HOH A 53 553 408 HOH HOH . G 4 HOH A 54 554 452 HOH HOH . G 4 HOH A 55 555 450 HOH HOH . G 4 HOH A 56 556 400 HOH HOH . G 4 HOH A 57 557 434 HOH HOH . G 4 HOH A 58 558 460 HOH HOH . G 4 HOH A 59 559 490 HOH HOH . G 4 HOH A 60 560 499 HOH HOH . G 4 HOH A 61 561 409 HOH HOH . G 4 HOH A 62 562 485 HOH HOH . G 4 HOH A 63 563 396 HOH HOH . G 4 HOH A 64 564 458 HOH HOH . G 4 HOH A 65 565 454 HOH HOH . G 4 HOH A 66 566 403 HOH HOH . G 4 HOH A 67 567 488 HOH HOH . G 4 HOH A 68 568 446 HOH HOH . G 4 HOH A 69 569 461 HOH HOH . G 4 HOH A 70 570 413 HOH HOH . G 4 HOH A 71 571 462 HOH HOH . G 4 HOH A 72 572 420 HOH HOH . G 4 HOH A 73 573 495 HOH HOH . G 4 HOH A 74 574 398 HOH HOH . G 4 HOH A 75 575 467 HOH HOH . G 4 HOH A 76 576 470 HOH HOH . G 4 HOH A 77 577 496 HOH HOH . G 4 HOH A 78 578 429 HOH HOH . G 4 HOH A 79 579 480 HOH HOH . G 4 HOH A 80 580 463 HOH HOH . G 4 HOH A 81 581 417 HOH HOH . G 4 HOH A 82 582 453 HOH HOH . G 4 HOH A 83 583 500 HOH HOH . G 4 HOH A 84 584 451 HOH HOH . G 4 HOH A 85 585 482 HOH HOH . G 4 HOH A 86 586 406 HOH HOH . G 4 HOH A 87 587 436 HOH HOH . G 4 HOH A 88 588 473 HOH HOH . G 4 HOH A 89 589 493 HOH HOH . G 4 HOH A 90 590 494 HOH HOH . G 4 HOH A 91 591 498 HOH HOH . G 4 HOH A 92 592 484 HOH HOH . G 4 HOH A 93 593 489 HOH HOH . G 4 HOH A 94 594 459 HOH HOH . G 4 HOH A 95 595 455 HOH HOH . G 4 HOH A 96 596 486 HOH HOH . G 4 HOH A 97 597 440 HOH HOH . G 4 HOH A 98 598 481 HOH HOH . G 4 HOH A 99 599 501 HOH HOH . G 4 HOH A 100 600 432 HOH HOH . G 4 HOH A 101 601 483 HOH HOH . G 4 HOH A 102 602 456 HOH HOH . G 4 HOH A 103 603 404 HOH HOH . G 4 HOH A 104 604 492 HOH HOH . G 4 HOH A 105 605 477 HOH HOH . H 4 HOH B 1 501 498 HOH HOH . H 4 HOH B 2 502 492 HOH HOH . H 4 HOH B 3 503 517 HOH HOH . H 4 HOH B 4 504 453 HOH HOH . H 4 HOH B 5 505 474 HOH HOH . H 4 HOH B 6 506 449 HOH HOH . H 4 HOH B 7 507 488 HOH HOH . H 4 HOH B 8 508 428 HOH HOH . H 4 HOH B 9 509 460 HOH HOH . H 4 HOH B 10 510 480 HOH HOH . H 4 HOH B 11 511 441 HOH HOH . H 4 HOH B 12 512 448 HOH HOH . H 4 HOH B 13 513 451 HOH HOH . H 4 HOH B 14 514 413 HOH HOH . H 4 HOH B 15 515 463 HOH HOH . H 4 HOH B 16 516 477 HOH HOH . H 4 HOH B 17 517 496 HOH HOH . H 4 HOH B 18 518 421 HOH HOH . H 4 HOH B 19 519 404 HOH HOH . H 4 HOH B 20 520 396 HOH HOH . H 4 HOH B 21 521 401 HOH HOH . H 4 HOH B 22 522 437 HOH HOH . H 4 HOH B 23 523 400 HOH HOH . H 4 HOH B 24 524 466 HOH HOH . H 4 HOH B 25 525 452 HOH HOH . H 4 HOH B 26 526 459 HOH HOH . H 4 HOH B 27 527 444 HOH HOH . H 4 HOH B 28 528 472 HOH HOH . H 4 HOH B 29 529 468 HOH HOH . H 4 HOH B 30 530 442 HOH HOH . H 4 HOH B 31 531 427 HOH HOH . H 4 HOH B 32 532 431 HOH HOH . H 4 HOH B 33 533 503 HOH HOH . H 4 HOH B 34 534 531 HOH HOH . H 4 HOH B 35 535 418 HOH HOH . H 4 HOH B 36 536 450 HOH HOH . H 4 HOH B 37 537 523 HOH HOH . H 4 HOH B 38 538 464 HOH HOH . H 4 HOH B 39 539 518 HOH HOH . H 4 HOH B 40 540 399 HOH HOH . H 4 HOH B 41 541 475 HOH HOH . H 4 HOH B 42 542 489 HOH HOH . H 4 HOH B 43 543 414 HOH HOH . H 4 HOH B 44 544 406 HOH HOH . H 4 HOH B 45 545 457 HOH HOH . H 4 HOH B 46 546 432 HOH HOH . H 4 HOH B 47 547 397 HOH HOH . H 4 HOH B 48 548 446 HOH HOH . H 4 HOH B 49 549 469 HOH HOH . H 4 HOH B 50 550 398 HOH HOH . H 4 HOH B 51 551 417 HOH HOH . H 4 HOH B 52 552 445 HOH HOH . H 4 HOH B 53 553 409 HOH HOH . H 4 HOH B 54 554 519 HOH HOH . H 4 HOH B 55 555 411 HOH HOH . H 4 HOH B 56 556 470 HOH HOH . H 4 HOH B 57 557 438 HOH HOH . H 4 HOH B 58 558 471 HOH HOH . H 4 HOH B 59 559 412 HOH HOH . H 4 HOH B 60 560 425 HOH HOH . H 4 HOH B 61 561 473 HOH HOH . H 4 HOH B 62 562 405 HOH HOH . H 4 HOH B 63 563 456 HOH HOH . H 4 HOH B 64 564 491 HOH HOH . H 4 HOH B 65 565 410 HOH HOH . H 4 HOH B 66 566 493 HOH HOH . H 4 HOH B 67 567 458 HOH HOH . H 4 HOH B 68 568 479 HOH HOH . H 4 HOH B 69 569 443 HOH HOH . H 4 HOH B 70 570 439 HOH HOH . H 4 HOH B 71 571 467 HOH HOH . H 4 HOH B 72 572 422 HOH HOH . H 4 HOH B 73 573 402 HOH HOH . H 4 HOH B 74 574 499 HOH HOH . H 4 HOH B 75 575 505 HOH HOH . H 4 HOH B 76 576 436 HOH HOH . H 4 HOH B 77 577 403 HOH HOH . H 4 HOH B 78 578 426 HOH HOH . H 4 HOH B 79 579 423 HOH HOH . H 4 HOH B 80 580 483 HOH HOH . H 4 HOH B 81 581 497 HOH HOH . H 4 HOH B 82 582 440 HOH HOH . H 4 HOH B 83 583 484 HOH HOH . H 4 HOH B 84 584 465 HOH HOH . H 4 HOH B 85 585 407 HOH HOH . H 4 HOH B 86 586 482 HOH HOH . H 4 HOH B 87 587 433 HOH HOH . H 4 HOH B 88 588 429 HOH HOH . H 4 HOH B 89 589 485 HOH HOH . H 4 HOH B 90 590 494 HOH HOH . H 4 HOH B 91 591 513 HOH HOH . H 4 HOH B 92 592 435 HOH HOH . H 4 HOH B 93 593 411 HOH HOH . H 4 HOH B 94 594 527 HOH HOH . H 4 HOH B 95 595 462 HOH HOH . H 4 HOH B 96 596 506 HOH HOH . H 4 HOH B 97 597 415 HOH HOH . H 4 HOH B 98 598 454 HOH HOH . H 4 HOH B 99 599 509 HOH HOH . H 4 HOH B 100 600 500 HOH HOH . H 4 HOH B 101 601 434 HOH HOH . H 4 HOH B 102 602 486 HOH HOH . H 4 HOH B 103 603 420 HOH HOH . H 4 HOH B 104 604 487 HOH HOH . H 4 HOH B 105 605 532 HOH HOH . H 4 HOH B 106 606 419 HOH HOH . H 4 HOH B 107 607 511 HOH HOH . H 4 HOH B 108 608 416 HOH HOH . H 4 HOH B 109 609 515 HOH HOH . H 4 HOH B 110 610 430 HOH HOH . H 4 HOH B 111 611 478 HOH HOH . H 4 HOH B 112 612 408 HOH HOH . H 4 HOH B 113 613 520 HOH HOH . H 4 HOH B 114 614 530 HOH HOH . H 4 HOH B 115 615 524 HOH HOH . H 4 HOH B 116 616 424 HOH HOH . H 4 HOH B 117 617 476 HOH HOH . H 4 HOH B 118 618 447 HOH HOH . H 4 HOH B 119 619 481 HOH HOH . H 4 HOH B 120 620 525 HOH HOH . H 4 HOH B 121 621 508 HOH HOH . H 4 HOH B 122 622 522 HOH HOH . H 4 HOH B 123 623 510 HOH HOH . H 4 HOH B 124 624 502 HOH HOH . H 4 HOH B 125 625 507 HOH HOH . H 4 HOH B 126 626 512 HOH HOH . H 4 HOH B 127 627 516 HOH HOH . H 4 HOH B 128 628 521 HOH HOH . H 4 HOH B 129 629 528 HOH HOH . H 4 HOH B 130 630 490 HOH HOH . H 4 HOH B 131 631 495 HOH HOH . H 4 HOH B 132 632 455 HOH HOH . H 4 HOH B 133 633 501 HOH HOH . H 4 HOH B 134 634 461 HOH HOH . H 4 HOH B 135 635 478 HOH HOH . H 4 HOH B 136 636 529 HOH HOH . H 4 HOH B 137 637 526 HOH HOH . H 4 HOH B 138 638 514 HOH HOH . H 4 HOH B 139 639 504 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLY . . . C 2 -25.475 -5.427 -18.965 1 38.94 ? N GLY 401 A 1 HETATM 2 C CA GLY . . . C 2 -25.594 -5.378 -20.435 1 35.67 ? CA GLY 401 A 1 HETATM 3 C C GLY . . . C 2 -25.454 -6.784 -20.919 1 36.12 ? C GLY 401 A 1 HETATM 4 O O GLY . . . C 2 -25.291 -7.025 -22.097 1 34 ? O GLY 401 A 1 HETATM 5 O OXT GLY . . . C 2 -25.532 -7.697 -20.097 1 32.13 ? OXT GLY 401 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #