data_6L23 # _model_server_result.job_id UYagI41jHDrPkfRsSgDCgw _model_server_result.datetime_utc '2024-10-26 02:29:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l23 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6L23 # _exptl.entry_id 6L23 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6L23 _cell.length_a 51.861 _cell.length_b 79.021 _cell.length_c 79.775 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L23 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 120 n n C1 C2 EDO sing 121 n n C1 H11 EDO sing 122 n n C1 H12 EDO sing 123 n n O1 HO1 EDO sing 124 n n C2 O2 EDO sing 125 n n C2 H21 EDO sing 126 n n C2 H22 EDO sing 127 n n O2 HO2 EDO sing 128 n n # _atom_sites.entry_id 6L23 _atom_sites.fract_transf_matrix[1][1] 0.019282 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012655 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012535 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 402 EDO EDO . C 2 EDO A 1 402 403 EDO EDO . D 2 EDO A 1 403 405 EDO EDO . E 2 EDO A 1 404 406 EDO EDO . F 2 EDO A 1 405 407 EDO EDO . G 2 EDO A 1 406 409 EDO EDO . H 2 EDO A 1 407 416 EDO EDO . I 2 EDO A 1 408 1 EDO EDO . J 2 EDO A 1 409 3 EDO EDO . K 3 E3U A 1 410 1 E3U HMT . L 4 HOH A 1 501 50 HOH HOH . L 4 HOH A 2 502 32 HOH HOH . L 4 HOH A 3 503 22 HOH HOH . L 4 HOH A 4 504 40 HOH HOH . L 4 HOH A 5 505 91 HOH HOH . L 4 HOH A 6 506 67 HOH HOH . L 4 HOH A 7 507 86 HOH HOH . L 4 HOH A 8 508 113 HOH HOH . L 4 HOH A 9 509 84 HOH HOH . L 4 HOH A 10 510 48 HOH HOH . L 4 HOH A 11 511 31 HOH HOH . L 4 HOH A 12 512 4 HOH HOH . L 4 HOH A 13 513 15 HOH HOH . L 4 HOH A 14 514 18 HOH HOH . L 4 HOH A 15 515 6 HOH HOH . L 4 HOH A 16 516 12 HOH HOH . L 4 HOH A 17 517 29 HOH HOH . L 4 HOH A 18 518 87 HOH HOH . L 4 HOH A 19 519 102 HOH HOH . L 4 HOH A 20 520 21 HOH HOH . L 4 HOH A 21 521 61 HOH HOH . L 4 HOH A 22 522 35 HOH HOH . L 4 HOH A 23 523 94 HOH HOH . L 4 HOH A 24 524 105 HOH HOH . L 4 HOH A 25 525 62 HOH HOH . L 4 HOH A 26 526 65 HOH HOH . L 4 HOH A 27 527 57 HOH HOH . L 4 HOH A 28 528 115 HOH HOH . L 4 HOH A 29 529 30 HOH HOH . L 4 HOH A 30 530 46 HOH HOH . L 4 HOH A 31 531 54 HOH HOH . L 4 HOH A 32 532 16 HOH HOH . L 4 HOH A 33 533 27 HOH HOH . L 4 HOH A 34 534 79 HOH HOH . L 4 HOH A 35 535 26 HOH HOH . L 4 HOH A 36 536 77 HOH HOH . L 4 HOH A 37 537 47 HOH HOH . L 4 HOH A 38 538 41 HOH HOH . L 4 HOH A 39 539 92 HOH HOH . L 4 HOH A 40 540 119 HOH HOH . L 4 HOH A 41 541 99 HOH HOH . L 4 HOH A 42 542 55 HOH HOH . L 4 HOH A 43 543 122 HOH HOH . L 4 HOH A 44 544 111 HOH HOH . L 4 HOH A 45 545 33 HOH HOH . L 4 HOH A 46 546 75 HOH HOH . L 4 HOH A 47 547 121 HOH HOH . L 4 HOH A 48 548 110 HOH HOH . L 4 HOH A 49 549 90 HOH HOH . L 4 HOH A 50 550 8 HOH HOH . L 4 HOH A 51 551 36 HOH HOH . L 4 HOH A 52 552 66 HOH HOH . L 4 HOH A 53 553 85 HOH HOH . L 4 HOH A 54 554 14 HOH HOH . L 4 HOH A 55 555 3 HOH HOH . L 4 HOH A 56 556 108 HOH HOH . L 4 HOH A 57 557 59 HOH HOH . L 4 HOH A 58 558 24 HOH HOH . L 4 HOH A 59 559 103 HOH HOH . L 4 HOH A 60 560 116 HOH HOH . L 4 HOH A 61 561 7 HOH HOH . L 4 HOH A 62 562 114 HOH HOH . L 4 HOH A 63 563 5 HOH HOH . L 4 HOH A 64 564 2 HOH HOH . L 4 HOH A 65 565 120 HOH HOH . L 4 HOH A 66 566 11 HOH HOH . L 4 HOH A 67 567 58 HOH HOH . L 4 HOH A 68 568 44 HOH HOH . L 4 HOH A 69 569 28 HOH HOH . L 4 HOH A 70 570 19 HOH HOH . L 4 HOH A 71 571 82 HOH HOH . L 4 HOH A 72 572 17 HOH HOH . L 4 HOH A 73 573 112 HOH HOH . L 4 HOH A 74 574 93 HOH HOH . L 4 HOH A 75 575 74 HOH HOH . L 4 HOH A 76 576 95 HOH HOH . L 4 HOH A 77 577 25 HOH HOH . L 4 HOH A 78 578 34 HOH HOH . L 4 HOH A 79 579 9 HOH HOH . L 4 HOH A 80 580 78 HOH HOH . L 4 HOH A 81 581 73 HOH HOH . L 4 HOH A 82 582 70 HOH HOH . L 4 HOH A 83 583 60 HOH HOH . L 4 HOH A 84 584 106 HOH HOH . L 4 HOH A 85 585 80 HOH HOH . L 4 HOH A 86 586 88 HOH HOH . L 4 HOH A 87 587 1 HOH HOH . L 4 HOH A 88 588 39 HOH HOH . L 4 HOH A 89 589 100 HOH HOH . L 4 HOH A 90 590 45 HOH HOH . L 4 HOH A 91 591 52 HOH HOH . L 4 HOH A 92 592 56 HOH HOH . L 4 HOH A 93 593 10 HOH HOH . L 4 HOH A 94 594 107 HOH HOH . L 4 HOH A 95 595 81 HOH HOH . L 4 HOH A 96 596 53 HOH HOH . L 4 HOH A 97 597 69 HOH HOH . L 4 HOH A 98 598 38 HOH HOH . L 4 HOH A 99 599 42 HOH HOH . L 4 HOH A 100 600 97 HOH HOH . L 4 HOH A 101 601 117 HOH HOH . L 4 HOH A 102 602 23 HOH HOH . L 4 HOH A 103 603 71 HOH HOH . L 4 HOH A 104 604 13 HOH HOH . L 4 HOH A 105 605 64 HOH HOH . L 4 HOH A 106 606 49 HOH HOH . L 4 HOH A 107 607 118 HOH HOH . L 4 HOH A 108 608 72 HOH HOH . L 4 HOH A 109 609 83 HOH HOH . L 4 HOH A 110 610 63 HOH HOH . L 4 HOH A 111 611 104 HOH HOH . L 4 HOH A 112 612 68 HOH HOH . L 4 HOH A 113 613 51 HOH HOH . L 4 HOH A 114 614 89 HOH HOH . L 4 HOH A 115 615 76 HOH HOH . L 4 HOH A 116 616 98 HOH HOH . L 4 HOH A 117 617 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 -20.108 29.029 -16.842 1 24.96 ? C1 EDO 403 A 1 HETATM 2 O O1 EDO . . . D 2 -19.058 29.906 -17.271 1 45 ? O1 EDO 403 A 1 HETATM 3 C C2 EDO . . . D 2 -19.519 27.835 -16.094 1 21.5 ? C2 EDO 403 A 1 HETATM 4 O O2 EDO . . . D 2 -18.588 28.295 -15.101 1 23.22 ? O2 EDO 403 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #