data_6L23 # _model_server_result.job_id mn0Lph5OoDvPX98gSV4cvw _model_server_result.datetime_utc '2024-11-28 13:04:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l23 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":410}' # _entry.id 6L23 # _exptl.entry_id 6L23 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 300.263 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6aR)-3,4,6a,10-tetrakis(oxidanyl)-6,7-dihydroindeno[2,1-c]chromen-9-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6L23 _cell.length_a 51.861 _cell.length_b 79.021 _cell.length_c 79.775 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L23 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H12 O6' _chem_comp.formula_weight 300.263 _chem_comp.id E3U _chem_comp.mon_nstd_flag . _chem_comp.name (6aR)-3,4,6a,10-tetrakis(oxidanyl)-6,7-dihydroindeno[2,1-c]chromen-9-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C11 E3U sing 83 n n C12 C16 E3U doub 84 n n C12 C13 E3U sing 85 n n C11 C14 E3U sing 86 n n C11 C07 E3U doub 87 n n C10 C08 E3U sing 88 n n C10 O09 E3U sing 89 n n C16 C17 E3U sing 90 n n C15 C17 E3U sing 91 n n C15 C14 E3U doub 92 n n C15 O19 E3U sing 93 n n C17 O18 E3U doub 94 n n C13 C08 E3U sing 95 n n C01 C02 E3U sing 96 n y C01 C03 E3U doub 97 n y C01 C07 E3U sing 98 n n C02 C04 E3U doub 99 n y C03 C05 E3U sing 100 n y C03 O09 E3U sing 101 n n C04 C06 E3U sing 102 n y C05 C06 E3U doub 103 n y C05 O21 E3U sing 104 n n C06 O22 E3U sing 105 n n C07 C08 E3U sing 106 n n C08 O20 E3U sing 107 n n C10 H1 E3U sing 108 n n C10 H2 E3U sing 109 n n C16 H3 E3U sing 110 n n C14 H5 E3U sing 111 n n C13 H6 E3U sing 112 n n C13 H7 E3U sing 113 n n C02 H8 E3U sing 114 n n C04 H9 E3U sing 115 n n O19 H11 E3U sing 116 n n O20 H12 E3U sing 117 n n O21 H13 E3U sing 118 n n O22 H14 E3U sing 119 n n # _atom_sites.entry_id 6L23 _atom_sites.fract_transf_matrix[1][1] 0.019282 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012655 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012535 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 402 EDO EDO . C 2 EDO A 1 402 403 EDO EDO . D 2 EDO A 1 403 405 EDO EDO . E 2 EDO A 1 404 406 EDO EDO . F 2 EDO A 1 405 407 EDO EDO . G 2 EDO A 1 406 409 EDO EDO . H 2 EDO A 1 407 416 EDO EDO . I 2 EDO A 1 408 1 EDO EDO . J 2 EDO A 1 409 3 EDO EDO . K 3 E3U A 1 410 1 E3U HMT . L 4 HOH A 1 501 50 HOH HOH . L 4 HOH A 2 502 32 HOH HOH . L 4 HOH A 3 503 22 HOH HOH . L 4 HOH A 4 504 40 HOH HOH . L 4 HOH A 5 505 91 HOH HOH . L 4 HOH A 6 506 67 HOH HOH . L 4 HOH A 7 507 86 HOH HOH . L 4 HOH A 8 508 113 HOH HOH . L 4 HOH A 9 509 84 HOH HOH . L 4 HOH A 10 510 48 HOH HOH . L 4 HOH A 11 511 31 HOH HOH . L 4 HOH A 12 512 4 HOH HOH . L 4 HOH A 13 513 15 HOH HOH . L 4 HOH A 14 514 18 HOH HOH . L 4 HOH A 15 515 6 HOH HOH . L 4 HOH A 16 516 12 HOH HOH . L 4 HOH A 17 517 29 HOH HOH . L 4 HOH A 18 518 87 HOH HOH . L 4 HOH A 19 519 102 HOH HOH . L 4 HOH A 20 520 21 HOH HOH . L 4 HOH A 21 521 61 HOH HOH . L 4 HOH A 22 522 35 HOH HOH . L 4 HOH A 23 523 94 HOH HOH . L 4 HOH A 24 524 105 HOH HOH . L 4 HOH A 25 525 62 HOH HOH . L 4 HOH A 26 526 65 HOH HOH . L 4 HOH A 27 527 57 HOH HOH . L 4 HOH A 28 528 115 HOH HOH . L 4 HOH A 29 529 30 HOH HOH . L 4 HOH A 30 530 46 HOH HOH . L 4 HOH A 31 531 54 HOH HOH . L 4 HOH A 32 532 16 HOH HOH . L 4 HOH A 33 533 27 HOH HOH . L 4 HOH A 34 534 79 HOH HOH . L 4 HOH A 35 535 26 HOH HOH . L 4 HOH A 36 536 77 HOH HOH . L 4 HOH A 37 537 47 HOH HOH . L 4 HOH A 38 538 41 HOH HOH . L 4 HOH A 39 539 92 HOH HOH . L 4 HOH A 40 540 119 HOH HOH . L 4 HOH A 41 541 99 HOH HOH . L 4 HOH A 42 542 55 HOH HOH . L 4 HOH A 43 543 122 HOH HOH . L 4 HOH A 44 544 111 HOH HOH . L 4 HOH A 45 545 33 HOH HOH . L 4 HOH A 46 546 75 HOH HOH . L 4 HOH A 47 547 121 HOH HOH . L 4 HOH A 48 548 110 HOH HOH . L 4 HOH A 49 549 90 HOH HOH . L 4 HOH A 50 550 8 HOH HOH . L 4 HOH A 51 551 36 HOH HOH . L 4 HOH A 52 552 66 HOH HOH . L 4 HOH A 53 553 85 HOH HOH . L 4 HOH A 54 554 14 HOH HOH . L 4 HOH A 55 555 3 HOH HOH . L 4 HOH A 56 556 108 HOH HOH . L 4 HOH A 57 557 59 HOH HOH . L 4 HOH A 58 558 24 HOH HOH . L 4 HOH A 59 559 103 HOH HOH . L 4 HOH A 60 560 116 HOH HOH . L 4 HOH A 61 561 7 HOH HOH . L 4 HOH A 62 562 114 HOH HOH . L 4 HOH A 63 563 5 HOH HOH . L 4 HOH A 64 564 2 HOH HOH . L 4 HOH A 65 565 120 HOH HOH . L 4 HOH A 66 566 11 HOH HOH . L 4 HOH A 67 567 58 HOH HOH . L 4 HOH A 68 568 44 HOH HOH . L 4 HOH A 69 569 28 HOH HOH . L 4 HOH A 70 570 19 HOH HOH . L 4 HOH A 71 571 82 HOH HOH . L 4 HOH A 72 572 17 HOH HOH . L 4 HOH A 73 573 112 HOH HOH . L 4 HOH A 74 574 93 HOH HOH . L 4 HOH A 75 575 74 HOH HOH . L 4 HOH A 76 576 95 HOH HOH . L 4 HOH A 77 577 25 HOH HOH . L 4 HOH A 78 578 34 HOH HOH . L 4 HOH A 79 579 9 HOH HOH . L 4 HOH A 80 580 78 HOH HOH . L 4 HOH A 81 581 73 HOH HOH . L 4 HOH A 82 582 70 HOH HOH . L 4 HOH A 83 583 60 HOH HOH . L 4 HOH A 84 584 106 HOH HOH . L 4 HOH A 85 585 80 HOH HOH . L 4 HOH A 86 586 88 HOH HOH . L 4 HOH A 87 587 1 HOH HOH . L 4 HOH A 88 588 39 HOH HOH . L 4 HOH A 89 589 100 HOH HOH . L 4 HOH A 90 590 45 HOH HOH . L 4 HOH A 91 591 52 HOH HOH . L 4 HOH A 92 592 56 HOH HOH . L 4 HOH A 93 593 10 HOH HOH . L 4 HOH A 94 594 107 HOH HOH . L 4 HOH A 95 595 81 HOH HOH . L 4 HOH A 96 596 53 HOH HOH . L 4 HOH A 97 597 69 HOH HOH . L 4 HOH A 98 598 38 HOH HOH . L 4 HOH A 99 599 42 HOH HOH . L 4 HOH A 100 600 97 HOH HOH . L 4 HOH A 101 601 117 HOH HOH . L 4 HOH A 102 602 23 HOH HOH . L 4 HOH A 103 603 71 HOH HOH . L 4 HOH A 104 604 13 HOH HOH . L 4 HOH A 105 605 64 HOH HOH . L 4 HOH A 106 606 49 HOH HOH . L 4 HOH A 107 607 118 HOH HOH . L 4 HOH A 108 608 72 HOH HOH . L 4 HOH A 109 609 83 HOH HOH . L 4 HOH A 110 610 63 HOH HOH . L 4 HOH A 111 611 104 HOH HOH . L 4 HOH A 112 612 68 HOH HOH . L 4 HOH A 113 613 51 HOH HOH . L 4 HOH A 114 614 89 HOH HOH . L 4 HOH A 115 615 76 HOH HOH . L 4 HOH A 116 616 98 HOH HOH . L 4 HOH A 117 617 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 E3U . A . K 3 0.349 9.378 -23.005 0.7 24.84 ? C12 E3U 410 A 1 HETATM 2 C C12 E3U . B . K 3 -0.464 8.641 -24.23 0.3 26.23 ? C12 E3U 410 A 1 HETATM 3 C C11 E3U . A . K 3 -0.044 8.611 -23.974 0.7 26.06 ? C11 E3U 410 A 1 HETATM 4 C C11 E3U . B . K 3 -0.022 9.621 -23.499 0.3 25.27 ? C11 E3U 410 A 1 HETATM 5 C C10 E3U . A . K 3 1.495 11.716 -25.672 0.7 31.24 ? C10 E3U 410 A 1 HETATM 6 C C10 E3U . B . K 3 0.081 10.84 -27.187 0.3 28.35 ? C10 E3U 410 A 1 HETATM 7 C C16 E3U . A . K 3 0.208 8.889 -21.657 0.7 30.63 ? C16 E3U 410 A 1 HETATM 8 C C16 E3U . B . K 3 -0.851 7.414 -23.591 0.3 25.18 ? C16 E3U 410 A 1 HETATM 9 C C15 E3U . A . K 3 -0.732 6.876 -22.466 0.7 22.34 ? C15 E3U 410 A 1 HETATM 10 C C15 E3U . B . K 3 -0.3 8.351 -21.483 0.3 25.3 ? C15 E3U 410 A 1 HETATM 11 C C17 E3U . A . K 3 -0.321 7.645 -21.432 0.7 22.07 ? C17 E3U 410 A 1 HETATM 12 C C17 E3U . B . K 3 -0.765 7.308 -22.227 0.3 21.57 ? C17 E3U 410 A 1 HETATM 13 C C14 E3U . A . K 3 -0.595 7.317 -23.766 0.7 25.64 ? C14 E3U 410 A 1 HETATM 14 C C14 E3U . B . K 3 0.073 9.525 -22.09 0.3 28.12 ? C14 E3U 410 A 1 HETATM 15 C C13 E3U . A . K 3 0.905 10.683 -23.281 0.7 28.04 ? C13 E3U 410 A 1 HETATM 16 C C13 E3U . B . K 3 -0.543 8.799 -25.652 0.3 26 ? C13 E3U 410 A 1 HETATM 17 C C01 E3U . A . K 3 0.092 9.284 -26.571 0.7 27.36 ? C01 E3U 410 A 1 HETATM 18 C C01 E3U . B . K 3 0.766 12.027 -24.531 0.3 26.52 ? C01 E3U 410 A 1 HETATM 19 C C02 E3U . A . K 3 -0.452 8.066 -27.015 0.7 25.08 ? C02 E3U 410 A 1 HETATM 20 C C02 E3U . B . K 3 1.097 12.607 -23.296 0.3 26.46 ? C02 E3U 410 A 1 HETATM 21 C C03 E3U . A . K 3 0.505 10.338 -27.482 0.7 27.61 ? C03 E3U 410 A 1 HETATM 22 C C03 E3U . B . K 3 0.904 12.754 -25.789 0.3 27.32 ? C03 E3U 410 A 1 HETATM 23 C C04 E3U . A . K 3 -0.618 7.869 -28.403 0.7 25.21 ? C04 E3U 410 A 1 HETATM 24 C C04 E3U . B . K 3 1.589 13.933 -23.28 0.3 27.78 ? C04 E3U 410 A 1 HETATM 25 C C05 E3U . A . K 3 0.336 10.135 -28.84 0.7 31.41 ? C05 E3U 410 A 1 HETATM 26 C C05 E3U . B . K 3 1.393 14.058 -25.755 0.3 26.93 ? C05 E3U 410 A 1 HETATM 27 C C06 E3U . A . K 3 -0.219 8.922 -29.302 0.7 28.59 ? C06 E3U 410 A 1 HETATM 28 C C06 E3U . B . K 3 1.736 14.656 -24.519 0.3 29.28 ? C06 E3U 410 A 1 HETATM 29 C C07 E3U . A . K 3 0.291 9.559 -25.195 0.7 24.09 ? C07 E3U 410 A 1 HETATM 30 C C07 E3U . B . K 3 0.243 10.707 -24.631 0.3 25.75 ? C07 E3U 410 A 1 HETATM 31 C C08 E3U . A . K 3 0.503 10.975 -24.665 0.7 25.13 ? C08 E3U 410 A 1 HETATM 32 C C08 E3U . B . K 3 0.378 9.917 -25.907 0.3 26.41 ? C08 E3U 410 A 1 HETATM 33 O O09 E3U . A . K 3 1.112 11.658 -26.969 0.7 31.29 ? O09 E3U 410 A 1 HETATM 34 O O09 E3U . B . K 3 0.538 12.113 -27.145 0.3 29.34 ? O09 E3U 410 A 1 HETATM 35 O O18 E3U . A . K 3 -0.437 7.211 -20.296 0.7 33.06 ? O18 E3U 410 A 1 HETATM 36 O O18 E3U . B . K 3 -1.097 6.275 -21.678 0.3 22.06 ? O18 E3U 410 A 1 HETATM 37 O O19 E3U . A . K 3 -1.271 5.61 -22.198 0.7 26.98 ? O19 E3U 410 A 1 HETATM 38 O O19 E3U . B . K 3 -0.192 8.255 -20.082 0.3 28.11 ? O19 E3U 410 A 1 HETATM 39 O O20 E3U . A . K 3 -0.63 11.808 -24.628 0.7 37.13 ? O20 E3U 410 A 1 HETATM 40 O O20 E3U . B . K 3 1.688 9.44 -25.927 0.3 28.97 ? O20 E3U 410 A 1 HETATM 41 O O21 E3U . A . K 3 0.721 11.132 -29.755 0.7 37.14 ? O21 E3U 410 A 1 HETATM 42 O O21 E3U . B . K 3 1.539 14.774 -26.954 0.3 29.73 ? O21 E3U 410 A 1 HETATM 43 O O22 E3U . A . K 3 -0.361 8.763 -30.68 0.7 30.83 ? O22 E3U 410 A 1 HETATM 44 O O22 E3U . B . K 3 2.228 15.976 -24.498 0.3 33.05 ? O22 E3U 410 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 44 #