data_6L36 # _model_server_result.job_id 3F2GnavS3Z68b6YjmQ5Zrw _model_server_result.datetime_utc '2024-11-23 18:00:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l36 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6L36 # _exptl.entry_id 6L36 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 276.675 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-chloro-5-nitro-N-phenylbenzamide _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.86 _cell.angle_gamma 90 _cell.entry_id 6L36 _cell.length_a 60.773 _cell.length_b 102.55 _cell.length_c 62.087 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L36 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F 1 1 B,G,H,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 80 A CYS 275 1_555 D C9 GW9 . A GW9 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.802 ? covale ? covale2 A SG CYS 81 A CYS 276 1_555 C C9 GW9 . A GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? covale ? covale3 A SG CYS 83 A CYS 278 1_555 E C9 GW9 . A GW9 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? covale ? covale4 B SG CYS 80 B CYS 275 1_555 H C9 GW9 . B GW9 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.812 ? covale ? covale5 B SG CYS 81 B CYS 276 1_555 G C9 GW9 . B GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? covale ? covale6 B SG CYS 83 B CYS 278 1_555 I C9 GW9 . B GW9 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? # _chem_comp.formula 'C13 H9 Cl N2 O3' _chem_comp.formula_weight 276.675 _chem_comp.id GW9 _chem_comp.mon_nstd_flag . _chem_comp.name 2-chloro-5-nitro-N-phenylbenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C9 GW9 sing 167 n n C9 C10 GW9 doub 168 n y C9 C8 GW9 sing 169 n y C10 C11 GW9 sing 170 n y C10 H10 GW9 sing 171 n n C11 C12 GW9 doub 172 n y C11 H11 GW9 sing 173 n n C12 N2 GW9 sing 174 n n C12 C13 GW9 sing 175 n y N2 O3 GW9 sing 176 n n N2 O2 GW9 doub 177 n n C13 C8 GW9 doub 178 n y C13 H13 GW9 sing 179 n n C8 C1 GW9 sing 180 n n C1 O1 GW9 doub 181 n n C1 N1 GW9 sing 182 n n N1 C2 GW9 sing 183 n n N1 HN1 GW9 sing 184 n n C2 C7 GW9 doub 185 n y C2 C3 GW9 sing 186 n y C7 C6 GW9 sing 187 n y C7 H7 GW9 sing 188 n n C6 C5 GW9 doub 189 n y C6 H6 GW9 sing 190 n n C5 C4 GW9 sing 191 n y C5 H5 GW9 sing 192 n n C4 C3 GW9 doub 193 n y C4 H4 GW9 sing 194 n n C3 H3 GW9 sing 195 n n # _atom_sites.entry_id 6L36 _atom_sites.fract_transf_matrix[1][1] 0.016455 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002272 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009751 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016259 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GW9 A 1 501 1 GW9 GW9 . D 2 GW9 A 1 502 3 GW9 GW9 . E 2 GW9 A 1 503 5 GW9 GW9 . F 3 F5A A 1 504 1 F5A F5A . G 2 GW9 B 1 501 2 GW9 GW9 . H 2 GW9 B 1 502 4 GW9 GW9 . I 2 GW9 B 1 503 6 GW9 GW9 . J 3 F5A B 1 504 2 F5A F5A . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 GW9 . . . C 2 -9.291 5.205 25.78 1 89.92 ? C9 GW9 501 A 1 HETATM 2 C C10 GW9 . . . C 2 -8.019 5.467 26.263 1 79.94 ? C10 GW9 501 A 1 HETATM 3 C C11 GW9 . . . C 2 -6.935 4.742 25.794 1 81.25 ? C11 GW9 501 A 1 HETATM 4 C C12 GW9 . . . C 2 -7.122 3.754 24.841 1 86.94 ? C12 GW9 501 A 1 HETATM 5 N N2 GW9 . . . C 2 -5.994 2.988 24.343 1 97.15 ? N2 GW9 501 A 1 HETATM 6 O O3 GW9 . . . C 2 -6.018 1.587 24.395 1 105.66 -1 O3 GW9 501 A 1 HETATM 7 O O2 GW9 . . . C 2 -5.06 3.541 23.894 1 95.94 ? O2 GW9 501 A 1 HETATM 8 C C13 GW9 . . . C 2 -8.392 3.491 24.36 1 90.82 ? C13 GW9 501 A 1 HETATM 9 C C8 GW9 . . . C 2 -9.476 4.214 24.831 1 95.14 ? C8 GW9 501 A 1 HETATM 10 C C1 GW9 . . . C 2 -10.868 3.909 24.281 1 93.02 ? C1 GW9 501 A 1 HETATM 11 O O1 GW9 . . . C 2 -11.564 4.799 23.93 1 92.23 ? O1 GW9 501 A 1 HETATM 12 N N1 GW9 . . . C 2 -11.305 2.521 24.194 1 90.41 ? N1 GW9 501 A 1 HETATM 13 C C2 GW9 . . . C 2 -12.617 2.158 23.672 1 104.4 ? C2 GW9 501 A 1 HETATM 14 C C7 GW9 . . . C 2 -12.767 0.947 23.015 1 102.49 ? C7 GW9 501 A 1 HETATM 15 C C6 GW9 . . . C 2 -14.001 0.575 22.508 1 98.37 ? C6 GW9 501 A 1 HETATM 16 C C5 GW9 . . . C 2 -15.093 1.415 22.661 1 96.13 ? C5 GW9 501 A 1 HETATM 17 C C4 GW9 . . . C 2 -14.948 2.624 23.318 1 94.3 ? C4 GW9 501 A 1 HETATM 18 C C3 GW9 . . . C 2 -13.713 2.996 23.825 1 100.05 ? C3 GW9 501 A 1 HETATM 19 H H10 GW9 . . . C 2 -7.892 6.13 26.902 1 96.1 ? H10 GW9 501 A 1 HETATM 20 H H11 GW9 . . . C 2 -6.081 4.919 26.119 1 97.68 ? H11 GW9 501 A 1 HETATM 21 H H13 GW9 . . . C 2 -8.518 2.828 23.721 1 109.16 ? H13 GW9 501 A 1 HETATM 22 H HN1 GW9 . . . C 2 -10.772 1.898 24.455 1 108.66 ? HN1 GW9 501 A 1 HETATM 23 H H7 GW9 . . . C 2 -12.035 0.383 22.911 1 123.16 ? H7 GW9 501 A 1 HETATM 24 H H6 GW9 . . . C 2 -14.097 -0.238 22.067 1 118.22 ? H6 GW9 501 A 1 HETATM 25 H H5 GW9 . . . C 2 -15.923 1.166 22.322 1 115.53 ? H5 GW9 501 A 1 HETATM 26 H H4 GW9 . . . C 2 -15.68 3.188 23.421 1 113.33 ? H4 GW9 501 A 1 HETATM 27 H H3 GW9 . . . C 2 -13.617 3.809 24.266 1 120.23 ? H3 GW9 501 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #