data_6L37 # _model_server_result.job_id 9uV3KGYmULc-0Yp6eNHZXw _model_server_result.datetime_utc '2024-11-27 04:10:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l37 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":501}' # _entry.id 6L37 # _exptl.entry_id 6L37 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 276.675 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-chloro-5-nitro-N-phenylbenzamide _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.63 _cell.angle_gamma 90 _cell.entry_id 6L37 _cell.length_a 61.006 _cell.length_b 103.258 _cell.length_c 61.133 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L37 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F 1 1 B,G,H,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 80 A CYS 275 1_555 D C9 GW9 . A GW9 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? covale ? covale2 A SG CYS 81 A CYS 276 1_555 C C9 GW9 . A GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.802 ? covale ? covale3 A SG CYS 83 A CYS 278 1_555 E C9 GW9 . A GW9 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? covale ? covale4 B SG CYS 80 B CYS 275 1_555 H C9 GW9 . B GW9 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.804 ? covale ? covale5 B SG CYS 81 B CYS 276 1_555 G C9 GW9 . B GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? covale ? covale6 B SG CYS 83 B CYS 278 1_555 I C9 GW9 . B GW9 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.802 ? # _chem_comp.formula 'C13 H9 Cl N2 O3' _chem_comp.formula_weight 276.675 _chem_comp.id GW9 _chem_comp.mon_nstd_flag . _chem_comp.name 2-chloro-5-nitro-N-phenylbenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C9 GW9 sing 162 n n C9 C10 GW9 doub 163 n y C9 C8 GW9 sing 164 n y C10 C11 GW9 sing 165 n y C10 H10 GW9 sing 166 n n C11 C12 GW9 doub 167 n y C11 H11 GW9 sing 168 n n C12 N2 GW9 sing 169 n n C12 C13 GW9 sing 170 n y N2 O3 GW9 sing 171 n n N2 O2 GW9 doub 172 n n C13 C8 GW9 doub 173 n y C13 H13 GW9 sing 174 n n C8 C1 GW9 sing 175 n n C1 O1 GW9 doub 176 n n C1 N1 GW9 sing 177 n n N1 C2 GW9 sing 178 n n N1 HN1 GW9 sing 179 n n C2 C7 GW9 doub 180 n y C2 C3 GW9 sing 181 n y C7 C6 GW9 sing 182 n y C7 H7 GW9 sing 183 n n C6 C5 GW9 doub 184 n y C6 H6 GW9 sing 185 n n C5 C4 GW9 sing 186 n y C5 H5 GW9 sing 187 n n C4 C3 GW9 doub 188 n y C4 H4 GW9 sing 189 n n C3 H3 GW9 sing 190 n n # _atom_sites.entry_id 6L37 _atom_sites.fract_transf_matrix[1][1] 0.016392 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003077 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009684 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016643 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GW9 A 1 501 1 GW9 GW9 . D 2 GW9 A 1 502 3 GW9 GW9 . E 2 GW9 A 1 503 5 GW9 GW9 . F 3 C5F A 1 504 1 C5F C5F . G 2 GW9 B 1 501 2 GW9 GW9 . H 2 GW9 B 1 502 4 GW9 GW9 . I 2 GW9 B 1 503 6 GW9 GW9 . J 3 C5F B 1 504 2 C5F C5F . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 GW9 . . . G 2 24.991 32.6 11.433 1 77.43 ? C9 GW9 501 B 1 HETATM 2 C C10 GW9 . . . G 2 25.455 33.044 10.205 1 79.65 ? C10 GW9 501 B 1 HETATM 3 C C11 GW9 . . . G 2 25.102 32.375 9.044 1 67.51 ? C11 GW9 501 B 1 HETATM 4 C C12 GW9 . . . G 2 24.284 31.26 9.111 1 85.72 ? C12 GW9 501 B 1 HETATM 5 N N2 GW9 . . . G 2 23.911 30.554 7.9 1 93.92 ? N2 GW9 501 B 1 HETATM 6 O O3 GW9 . . . G 2 24.149 29.176 7.791 1 108.06 -1 O3 GW9 501 B 1 HETATM 7 O O2 GW9 . . . G 2 23.41 31.138 7.013 1 80.64 ? O2 GW9 501 B 1 HETATM 8 C C13 GW9 . . . G 2 23.822 30.815 10.338 1 91.77 ? C13 GW9 501 B 1 HETATM 9 C C8 GW9 . . . G 2 24.176 31.483 11.499 1 64.55 ? C8 GW9 501 B 1 HETATM 10 C C1 GW9 . . . G 2 23.656 30.981 12.846 1 76.09 ? C1 GW9 501 B 1 HETATM 11 O O1 GW9 . . . G 2 23.687 31.704 13.782 1 69.19 ? O1 GW9 501 B 1 HETATM 12 N N1 GW9 . . . G 2 23.139 29.619 12.935 1 85.64 ? N1 GW9 501 B 1 HETATM 13 C C2 GW9 . . . G 2 22.612 29.026 14.162 1 82.48 ? C2 GW9 501 B 1 HETATM 14 C C7 GW9 . . . G 2 22.196 27.706 14.12 1 92.68 ? C7 GW9 501 B 1 HETATM 15 C C6 GW9 . . . G 2 21.685 27.095 15.252 1 109.31 ? C6 GW9 501 B 1 HETATM 16 C C5 GW9 . . . G 2 21.584 27.806 16.436 1 102.43 ? C5 GW9 501 B 1 HETATM 17 C C4 GW9 . . . G 2 21.997 29.126 16.484 1 93.51 ? C4 GW9 501 B 1 HETATM 18 C C3 GW9 . . . G 2 22.509 29.736 15.35 1 81.5 ? C3 GW9 501 B 1 HETATM 19 H H10 GW9 . . . G 2 26.004 33.793 10.159 1 95.3 ? H10 GW9 501 B 1 HETATM 20 H H11 GW9 . . . G 2 25.413 32.675 8.221 1 80.73 ? H11 GW9 501 B 1 HETATM 21 H H13 GW9 . . . G 2 23.273 30.065 10.383 1 109.84 ? H13 GW9 501 B 1 HETATM 22 H HN1 GW9 . . . G 2 23.14 29.139 12.221 1 102.48 ? HN1 GW9 501 B 1 HETATM 23 H H7 GW9 . . . G 2 22.262 27.226 13.326 1 110.93 ? H7 GW9 501 B 1 HETATM 24 H H6 GW9 . . . G 2 21.409 26.207 15.217 1 130.88 ? H6 GW9 501 B 1 HETATM 25 H H5 GW9 . . . G 2 21.242 27.396 17.198 1 122.63 ? H5 GW9 501 B 1 HETATM 26 H H4 GW9 . . . G 2 21.931 29.605 17.279 1 111.92 ? H4 GW9 501 B 1 HETATM 27 H H3 GW9 . . . G 2 22.784 30.624 15.386 1 97.51 ? H3 GW9 501 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #