data_6L37 # _model_server_result.job_id DfarAZS4wt301yW8QGWI-A _model_server_result.datetime_utc '2024-10-31 06:21:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l37 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":504}' # _entry.id 6L37 # _exptl.entry_id 6L37 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 289.154 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-{4-[(1S)-2,2-dichlorocyclopropyl]phenoxy}-2-methylpropanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.63 _cell.angle_gamma 90 _cell.entry_id 6L37 _cell.length_a 61.006 _cell.length_b 103.258 _cell.length_c 61.133 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L37 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F 1 1 B,G,H,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 80 A CYS 275 1_555 D C9 GW9 . A GW9 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? covale ? covale2 A SG CYS 81 A CYS 276 1_555 C C9 GW9 . A GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.802 ? covale ? covale3 A SG CYS 83 A CYS 278 1_555 E C9 GW9 . A GW9 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? covale ? covale4 B SG CYS 80 B CYS 275 1_555 H C9 GW9 . B GW9 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.804 ? covale ? covale5 B SG CYS 81 B CYS 276 1_555 G C9 GW9 . B GW9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? covale ? covale6 B SG CYS 83 B CYS 278 1_555 I C9 GW9 . B GW9 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.802 ? # _chem_comp.formula 'C13 H14 Cl2 O3' _chem_comp.formula_weight 289.154 _chem_comp.id C5F _chem_comp.mon_nstd_flag . _chem_comp.name '2-{4-[(1S)-2,2-dichlorocyclopropyl]phenoxy}-2-methylpropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C15 C5F sing 70 n n C16 C15 C5F sing 71 n n C15 O03 C5F sing 72 n n C15 C18 C5F sing 73 n n O03 C14 C5F sing 74 n n C12 C14 C5F doub 75 n y C12 C10 C5F sing 76 n y C14 C13 C5F sing 77 n y C10 C09 C5F doub 78 n y C18 O05 C5F doub 79 n n C18 O04 C5F sing 80 n n C13 C11 C5F doub 81 n y C09 C11 C5F sing 82 n y C09 C06 C5F sing 83 n n C08 C06 C5F sing 84 n n C08 C07 C5F sing 85 n n C06 C07 C5F sing 86 n n CL1 C07 C5F sing 87 n n C07 CL2 C5F sing 88 n n C06 H16 C5F sing 89 n n C08 H82 C5F sing 90 n n C08 H81 C5F sing 91 n n C10 H10 C5F sing 92 n n C11 H11 C5F sing 93 n n C12 H21 C5F sing 94 n n C13 H31 C5F sing 95 n n C16 H62 C5F sing 96 n n C16 H61 C5F sing 97 n n C16 H63 C5F sing 98 n n C17 H72 C5F sing 99 n n C17 H71 C5F sing 100 n n C17 H73 C5F sing 101 n n O04 H1 C5F sing 102 n n # _atom_sites.entry_id 6L37 _atom_sites.fract_transf_matrix[1][1] 0.016392 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003077 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009684 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016643 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GW9 A 1 501 1 GW9 GW9 . D 2 GW9 A 1 502 3 GW9 GW9 . E 2 GW9 A 1 503 5 GW9 GW9 . F 3 C5F A 1 504 1 C5F C5F . G 2 GW9 B 1 501 2 GW9 GW9 . H 2 GW9 B 1 502 4 GW9 GW9 . I 2 GW9 B 1 503 6 GW9 GW9 . J 3 C5F B 1 504 2 C5F C5F . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C06 C5F . . . J 3 32.896 38.488 15.166 1 117.16 ? C06 C5F 504 B 1 HETATM 2 C C07 C5F . . . J 3 33.205 39.613 16.157 1 118.53 ? C07 C5F 504 B 1 HETATM 3 C C08 C5F . . . J 3 32.448 38.372 16.627 1 111.44 ? C08 C5F 504 B 1 HETATM 4 C C09 C5F . . . J 3 32.095 38.542 13.851 1 94.19 ? C09 C5F 504 B 1 HETATM 5 C C10 C5F . . . J 3 32.83 38.658 12.513 1 86.72 ? C10 C5F 504 B 1 HETATM 6 C C11 C5F . . . J 3 30.564 38.482 13.884 1 92.04 ? C11 C5F 504 B 1 HETATM 7 C C12 C5F . . . J 3 32.033 38.712 11.207 1 95.79 ? C12 C5F 504 B 1 HETATM 8 C C13 C5F . . . J 3 29.769 38.535 12.577 1 95.16 ? C13 C5F 504 B 1 HETATM 9 C C14 C5F . . . J 3 30.502 38.647 11.236 1 83.19 ? C14 C5F 504 B 1 HETATM 10 C C15 C5F . . . J 3 29.563 37.453 9.364 1 95.87 ? C15 C5F 504 B 1 HETATM 11 C C16 C5F . . . J 3 28.768 37.698 8.06 1 87 ? C16 C5F 504 B 1 HETATM 12 C C17 C5F . . . J 3 28.763 36.466 10.249 1 106.66 ? C17 C5F 504 B 1 HETATM 13 C C18 C5F . . . J 3 30.925 36.826 9.009 1 92.08 ? C18 C5F 504 B 1 HETATM 14 O O03 C5F . . . J 3 29.756 38.697 10.031 1 83.54 ? O03 C5F 504 B 1 HETATM 15 O O04 C5F . . . J 3 31.106 35.584 9.149 1 98.14 ? O04 C5F 504 B 1 HETATM 16 O O05 C5F . . . J 3 31.863 37.556 8.582 1 85.99 -1 O05 C5F 504 B 1 HETATM 17 CL CL1 C5F . . . J 3 32.221 41.093 15.973 1 135.87 ? CL1 C5F 504 B 1 HETATM 18 CL CL2 C5F . . . J 3 34.91 39.724 16.684 1 160.57 ? CL2 C5F 504 B 1 HETATM 19 H H16 C5F . . . J 3 33.694 37.952 15.036 1 140.3 ? H16 C5F 504 B 1 HETATM 20 H H82 C5F . . . J 3 31.499 38.496 16.784 1 133.44 ? H82 C5F 504 B 1 HETATM 21 H H81 C5F . . . J 3 32.957 37.752 17.173 1 133.44 ? H81 C5F 504 B 1 HETATM 22 H H10 C5F . . . J 3 33.759 38.695 12.494 1 103.77 ? H10 C5F 504 B 1 HETATM 23 H H11 C5F . . . J 3 30.119 38.411 14.697 1 110.16 ? H11 C5F 504 B 1 HETATM 24 H H21 C5F . . . J 3 32.479 38.78 10.394 1 114.66 ? H21 C5F 504 B 1 HETATM 25 H H31 C5F . . . J 3 28.84 38.497 12.597 1 113.91 ? H31 C5F 504 B 1 HETATM 26 H H62 C5F . . . J 3 29.264 38.304 7.488 1 104.12 ? H62 C5F 504 B 1 HETATM 27 H H61 C5F . . . J 3 27.907 38.09 8.276 1 104.12 ? H61 C5F 504 B 1 HETATM 28 H H63 C5F . . . J 3 28.633 36.855 7.6 1 104.12 ? H63 C5F 504 B 1 HETATM 29 H H72 C5F . . . J 3 29.24 36.318 11.081 1 127.7 ? H72 C5F 504 B 1 HETATM 30 H H71 C5F . . . J 3 28.66 35.622 9.781 1 127.7 ? H71 C5F 504 B 1 HETATM 31 H H73 C5F . . . J 3 27.888 36.839 10.44 1 127.7 ? H73 C5F 504 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 31 #