data_6L47 # _model_server_result.job_id bdLl4AAO7-cjAyfr89uVGg _model_server_result.datetime_utc '2024-12-23 07:06:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l47 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 6L47 # _exptl.entry_id 6L47 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 393.56 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,2-dimethyl-N-(2,4,6-trimethoxyphenyl)dodecanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 300 A CYS 365 1_555 A SG CYS 451 A CYS 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf2 A SG CYS 463 A CYS 528 1_555 A SG CYS 481 A CYS 548 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 B SG CYS 300 B CYS 365 1_555 B SG CYS 451 B CYS 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf4 B SG CYS 463 B CYS 528 1_555 B SG CYS 481 B CYS 548 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C23 H39 N O4' _chem_comp.formula_weight 393.56 _chem_comp.id E5L _chem_comp.mon_nstd_flag . _chem_comp.name 2,2-dimethyl-N-(2,4,6-trimethoxyphenyl)dodecanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 C21 E5L sing 160 n n C21 C20 E5L sing 161 n n C20 C19 E5L sing 162 n n C19 C18 E5L sing 163 n n C18 C17 E5L sing 164 n n C16 C17 E5L sing 165 n n C16 C15 E5L sing 166 n n C15 C11 E5L sing 167 n n C11 C8 E5L sing 168 n n C12 O E5L sing 169 n n O C1 E5L sing 170 n n C10 C4 E5L sing 171 n n C8 C4 E5L sing 172 n n N C3 E5L sing 173 n n N C E5L sing 174 n n C4 C3 E5L sing 175 n n C4 C9 E5L sing 176 n n C1 C E5L doub 177 n y C1 C6 E5L sing 178 n y C3 O3 E5L doub 179 n n C C2 E5L sing 180 n y C6 C5 E5L doub 181 n y C13 O1 E5L sing 182 n n C2 O1 E5L sing 183 n n C2 C7 E5L doub 184 n y C5 C7 E5L sing 185 n y C5 O2 E5L sing 186 n n O2 C14 E5L sing 187 n n N H1 E5L sing 188 n n C10 H2 E5L sing 189 n n C10 H3 E5L sing 190 n n C10 H4 E5L sing 191 n n C11 H5 E5L sing 192 n n C11 H6 E5L sing 193 n n C12 H7 E5L sing 194 n n C12 H8 E5L sing 195 n n C12 H9 E5L sing 196 n n C13 H10 E5L sing 197 n n C13 H11 E5L sing 198 n n C13 H12 E5L sing 199 n n C14 H13 E5L sing 200 n n C14 H14 E5L sing 201 n n C14 H15 E5L sing 202 n n C15 H16 E5L sing 203 n n C15 H17 E5L sing 204 n n C16 H18 E5L sing 205 n n C16 H19 E5L sing 206 n n C17 H20 E5L sing 207 n n C17 H21 E5L sing 208 n n C18 H22 E5L sing 209 n n C18 H23 E5L sing 210 n n C19 H24 E5L sing 211 n n C19 H25 E5L sing 212 n n C20 H26 E5L sing 213 n n C20 H27 E5L sing 214 n n C21 H28 E5L sing 215 n n C21 H29 E5L sing 216 n n C22 H30 E5L sing 217 n n C22 H31 E5L sing 218 n n C22 H32 E5L sing 219 n n C6 H33 E5L sing 220 n n C7 H34 E5L sing 221 n n C8 H35 E5L sing 222 n n C8 H36 E5L sing 223 n n C9 H37 E5L sing 224 n n C9 H38 E5L sing 225 n n C9 H39 E5L sing 226 n n # _atom_sites.entry_id 6L47 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 E5L A 1 1001 1001 E5L CI9 . D 3 CLR A 1 1002 2001 CLR CLR . E 2 E5L B 1 1001 1001 E5L CI9 . F 3 CLR B 1 1002 2001 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N E5L . . . E 2 125.123 109.437 106.14 1 79.66 ? N E5L 1001 B 1 HETATM 2 C C E5L . . . E 2 124.879 110.593 106.799 1 79.53 ? C E5L 1001 B 1 HETATM 3 O O E5L . . . E 2 123.191 111.366 105.148 1 97.12 ? O E5L 1001 B 1 HETATM 4 C C1 E5L . . . E 2 123.898 111.591 106.302 1 81.76 ? C1 E5L 1001 B 1 HETATM 5 C C10 E5L . . . E 2 126.775 107.606 105.241 1 76.28 ? C10 E5L 1001 B 1 HETATM 6 C C11 E5L . . . E 2 123.896 106.816 104.508 1 64.68 ? C11 E5L 1001 B 1 HETATM 7 C C12 E5L . . . E 2 122.44 112.412 104.529 1 93.61 ? C12 E5L 1001 B 1 HETATM 8 C C13 E5L . . . E 2 127.859 110.062 108.035 1 85.89 ? C13 E5L 1001 B 1 HETATM 9 C C14 E5L . . . E 2 122.868 114.479 109.316 1 91.54 ? C14 E5L 1001 B 1 HETATM 10 C C15 E5L . . . E 2 123.036 105.817 103.743 1 62.97 ? C15 E5L 1001 B 1 HETATM 11 C C16 E5L . . . E 2 122.034 106.548 102.861 1 73.77 ? C16 E5L 1001 B 1 HETATM 12 C C17 E5L . . . E 2 121.087 107.395 103.702 1 73.3 ? C17 E5L 1001 B 1 HETATM 13 C C18 E5L . . . E 2 120.27 108.324 102.812 1 81.43 ? C18 E5L 1001 B 1 HETATM 14 C C19 E5L . . . E 2 119.601 107.549 101.684 1 83.73 ? C19 E5L 1001 B 1 HETATM 15 C C2 E5L . . . E 2 125.606 110.905 108.052 1 81.18 ? C2 E5L 1001 B 1 HETATM 16 C C20 E5L . . . E 2 119.368 108.451 100.477 1 85.6 ? C20 E5L 1001 B 1 HETATM 17 C C21 E5L . . . E 2 118.938 107.641 99.262 1 75.58 ? C21 E5L 1001 B 1 HETATM 18 C C22 E5L . . . E 2 120.066 106.752 98.794 1 86.28 ? C22 E5L 1001 B 1 HETATM 19 C C3 E5L . . . E 2 124.911 108.253 106.72 1 76.61 ? C3 E5L 1001 B 1 HETATM 20 C C4 E5L . . . E 2 125.721 107.089 106.213 1 81.54 ? C4 E5L 1001 B 1 HETATM 21 C C5 E5L . . . E 2 124.418 113.004 108.208 1 82.03 ? C5 E5L 1001 B 1 HETATM 22 C C6 E5L . . . E 2 123.707 112.758 107.034 1 77.55 ? C6 E5L 1001 B 1 HETATM 23 C C7 E5L . . . E 2 125.35 112.101 108.707 1 79.9 ? C7 E5L 1001 B 1 HETATM 24 C C8 E5L . . . E 2 124.787 106.107 105.519 1 66.39 ? C8 E5L 1001 B 1 HETATM 25 C C9 E5L . . . E 2 126.404 106.409 107.391 1 78.61 ? C9 E5L 1001 B 1 HETATM 26 O O1 E5L . . . E 2 126.53 110.026 108.547 1 89.1 ? O1 E5L 1001 B 1 HETATM 27 O O2 E5L . . . E 2 124.192 114.167 108.894 1 93.79 ? O2 E5L 1001 B 1 HETATM 28 O O3 E5L . . . E 2 124.111 108.085 107.625 1 78.88 ? O3 E5L 1001 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #