data_6L4K # _model_server_result.job_id CLoJc1WZxkgpvXdOSHnuyA _model_server_result.datetime_utc '2024-11-12 21:25:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l4k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1002}' # _entry.id 6L4K # _exptl.entry_id 6L4K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 74.89 _cell.angle_beta 89.68 _cell.angle_gamma 80.04 _cell.entry_id 6L4K _cell.length_a 38.356 _cell.length_b 93.523 _cell.length_c 96.359 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L4K _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I 1 1 B,J,K,L,M,N,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 51 A CYS 53 1_555 A SG CYS 60 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 73 A CYS 75 1_555 A SG CYS 89 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf3 A SG CYS 88 A CYS 90 1_555 A SG CYS 99 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? disulf ? disulf4 A SG CYS 122 A CYS 124 1_555 A SG CYS 167 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf5 A SG CYS 166 A CYS 168 1_555 A SG CYS 175 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf6 A SG CYS 198 A CYS 200 1_555 A SG CYS 244 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf7 A SG CYS 243 A CYS 245 1_555 A SG CYS 251 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf8 A SG CYS 263 A CYS 265 1_555 A SG CYS 277 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf9 A SG CYS 276 A CYS 278 1_555 A SG CYS 287 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf10 A SG CYS 314 A CYS 316 1_555 A SG CYS 359 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf11 A SG CYS 358 A CYS 360 1_555 A SG CYS 367 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? disulf ? disulf12 A SG CYS 390 A CYS 392 1_555 A SG CYS 436 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf13 A SG CYS 435 A CYS 437 1_555 A SG CYS 446 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf14 A SG CYS 459 A CYS 461 1_555 A SG CYS 475 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf15 A SG CYS 474 A CYS 476 1_555 A SG CYS 485 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf16 A SG CYS 512 A CYS 514 1_555 A SG CYS 557 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf17 A SG CYS 556 A CYS 558 1_555 A SG CYS 565 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf18 B SG CYS 51 I CYS 53 1_555 B SG CYS 60 I CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf19 B SG CYS 73 I CYS 75 1_555 B SG CYS 89 I CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? disulf ? disulf20 B SG CYS 88 I CYS 90 1_555 B SG CYS 99 I CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf21 B SG CYS 122 I CYS 124 1_555 B SG CYS 167 I CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf22 B SG CYS 166 I CYS 168 1_555 B SG CYS 175 I CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf23 B SG CYS 198 I CYS 200 1_555 B SG CYS 244 I CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf24 B SG CYS 243 I CYS 245 1_555 B SG CYS 251 I CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf25 B SG CYS 263 I CYS 265 1_555 B SG CYS 277 I CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf26 B SG CYS 276 I CYS 278 1_555 B SG CYS 287 I CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf27 B SG CYS 314 I CYS 316 1_555 B SG CYS 359 I CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? disulf ? disulf28 B SG CYS 358 I CYS 360 1_555 B SG CYS 367 I CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? disulf ? disulf29 B SG CYS 390 I CYS 392 1_555 B SG CYS 436 I CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf30 B SG CYS 435 I CYS 437 1_555 B SG CYS 446 I CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf31 B SG CYS 459 I CYS 461 1_555 B SG CYS 475 I CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf32 B SG CYS 474 I CYS 476 1_555 B SG CYS 485 I CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? disulf ? disulf33 B SG CYS 512 I CYS 514 1_555 B SG CYS 557 I CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf34 B SG CYS 556 I CYS 558 1_555 B SG CYS 565 I CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc1 A NE2 HIS 240 A HIS 242 1_555 I CU E5O . A E5O 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 295 n n C1 O2 PLM doub 296 n n C1 C2 PLM sing 297 n n O1 H PLM sing 298 n n C2 C3 PLM sing 299 n n C2 H21 PLM sing 300 n n C2 H22 PLM sing 301 n n C3 C4 PLM sing 302 n n C3 H31 PLM sing 303 n n C3 H32 PLM sing 304 n n C4 C5 PLM sing 305 n n C4 H41 PLM sing 306 n n C4 H42 PLM sing 307 n n C5 C6 PLM sing 308 n n C5 H51 PLM sing 309 n n C5 H52 PLM sing 310 n n C6 C7 PLM sing 311 n n C6 H61 PLM sing 312 n n C6 H62 PLM sing 313 n n C7 C8 PLM sing 314 n n C7 H71 PLM sing 315 n n C7 H72 PLM sing 316 n n C8 C9 PLM sing 317 n n C8 H81 PLM sing 318 n n C8 H82 PLM sing 319 n n C9 CA PLM sing 320 n n C9 H91 PLM sing 321 n n C9 H92 PLM sing 322 n n CA CB PLM sing 323 n n CA HA1 PLM sing 324 n n CA HA2 PLM sing 325 n n CB CC PLM sing 326 n n CB HB1 PLM sing 327 n n CB HB2 PLM sing 328 n n CC CD PLM sing 329 n n CC HC1 PLM sing 330 n n CC HC2 PLM sing 331 n n CD CE PLM sing 332 n n CD HD1 PLM sing 333 n n CD HD2 PLM sing 334 n n CE CF PLM sing 335 n n CE HE1 PLM sing 336 n n CE HE2 PLM sing 337 n n CF CG PLM sing 338 n n CF HF1 PLM sing 339 n n CF HF2 PLM sing 340 n n CG HG1 PLM sing 341 n n CG HG2 PLM sing 342 n n CG HG3 PLM sing 343 n n # _atom_sites.entry_id 6L4K _atom_sites.fract_transf_matrix[1][1] 0.026072 _atom_sites.fract_transf_matrix[1][2] -0.004577 _atom_sites.fract_transf_matrix[1][3] 0.001098 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010856 _atom_sites.fract_transf_matrix[2][3] -0.002967 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010759 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PLM A 1 1001 1001 PLM PLM . D 2 PLM A 1 1002 1002 PLM PLM . E 2 PLM A 1 1003 1003 PLM PLM . F 2 PLM A 1 1004 1004 PLM PLM . G 2 PLM A 1 1005 1005 PLM PLM . H 2 PLM A 1 1006 1006 PLM PLM . I 3 E5O A 1 1007 1 E5O Cu2 . J 2 PLM I 1 1001 1001 PLM PLM . K 2 PLM I 1 1002 1002 PLM PLM . L 2 PLM I 1 1003 1003 PLM PLM . M 2 PLM I 1 1004 1004 PLM PLM . N 2 PLM I 1 1005 1005 PLM PLM . O 2 PLM I 1 1006 1006 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . K 2 24.974 25.349 33.011 1 59.35 ? C1 PLM 1002 I 1 HETATM 2 O O1 PLM . . . K 2 24.258 26.216 33.592 1 48.36 ? O1 PLM 1002 I 1 HETATM 3 O O2 PLM . . . K 2 25.824 25.652 32.135 1 56.64 ? O2 PLM 1002 I 1 HETATM 4 C C2 PLM . . . K 2 24.802 23.875 33.383 1 54.76 ? C2 PLM 1002 I 1 HETATM 5 C C3 PLM . . . K 2 25.312 23.668 34.808 1 51.85 ? C3 PLM 1002 I 1 HETATM 6 C C4 PLM . . . K 2 25.163 22.222 35.285 1 49.28 ? C4 PLM 1002 I 1 HETATM 7 C C5 PLM . . . K 2 24.036 22.134 36.311 1 49.32 ? C5 PLM 1002 I 1 HETATM 8 C C6 PLM . . . K 2 23.483 20.724 36.479 1 49.63 ? C6 PLM 1002 I 1 HETATM 9 C C7 PLM . . . K 2 22.374 20.729 37.522 1 48.6 ? C7 PLM 1002 I 1 HETATM 10 C C8 PLM . . . K 2 22.108 19.332 38.049 1 52.56 ? C8 PLM 1002 I 1 HETATM 11 C C9 PLM . . . K 2 21.242 19.405 39.297 1 60.68 ? C9 PLM 1002 I 1 HETATM 12 C CA PLM . . . K 2 20.259 18.229 39.433 1 68.56 ? CA PLM 1002 I 1 HETATM 13 C CB PLM . . . K 2 20.364 17.507 40.779 1 68.98 ? CB PLM 1002 I 1 HETATM 14 C CC PLM . . . K 2 19.847 16.067 40.745 1 67.66 ? CC PLM 1002 I 1 HETATM 15 C CD PLM . . . K 2 18.332 15.969 40.74 1 62.83 ? CD PLM 1002 I 1 HETATM 16 C CE PLM . . . K 2 17.839 14.772 41.549 1 62.59 ? CE PLM 1002 I 1 HETATM 17 C CF PLM . . . K 2 18.221 13.399 40.999 1 59.08 ? CF PLM 1002 I 1 HETATM 18 C CG PLM . . . K 2 17.704 12.27 41.901 1 59.37 ? CG PLM 1002 I 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #