data_6L4K
#
_model_server_result.job_id            c-EAqNOm1NYcpfcc9OSo9w 
_model_server_result.datetime_utc      '2024-11-12 21:26:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6l4k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1006}' 
#
_entry.id    6L4K 
#
_exptl.entry_id    6L4K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              256.424 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITIC ACID' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         74.89 
_cell.angle_beta          89.68 
_cell.angle_gamma         80.04 
_cell.entry_id            6L4K 
_cell.length_a            38.356 
_cell.length_b            93.523 
_cell.length_c            96.359 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6L4K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I 1 1 
B,J,K,L,M,N,O 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 51 A CYS 53 1_555 A SG CYS 60 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 73 A CYS 75 1_555 A SG CYS 89 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
disulf ? disulf3 A SG CYS 88 A CYS 90 1_555 A SG CYS 99 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
disulf ? disulf4 A SG CYS 122 A CYS 124 1_555 A SG CYS 167 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
disulf ? disulf5 A SG CYS 166 A CYS 168 1_555 A SG CYS 175 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
disulf ? disulf6 A SG CYS 198 A CYS 200 1_555 A SG CYS 244 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf7 A SG CYS 243 A CYS 245 1_555 A SG CYS 251 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
disulf ? disulf8 A SG CYS 263 A CYS 265 1_555 A SG CYS 277 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf9 A SG CYS 276 A CYS 278 1_555 A SG CYS 287 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
disulf ? disulf10 A SG CYS 314 A CYS 316 1_555 A SG CYS 359 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf11 A SG CYS 358 A CYS 360 1_555 A SG CYS 367 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? 
disulf ? disulf12 A SG CYS 390 A CYS 392 1_555 A SG CYS 436 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf13 A SG CYS 435 A CYS 437 1_555 A SG CYS 446 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
disulf ? disulf14 A SG CYS 459 A CYS 461 1_555 A SG CYS 475 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf15 A SG CYS 474 A CYS 476 1_555 A SG CYS 485 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
disulf ? disulf16 A SG CYS 512 A CYS 514 1_555 A SG CYS 557 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf17 A SG CYS 556 A CYS 558 1_555 A SG CYS 565 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
disulf ? disulf18 B SG CYS 51 I CYS 53 1_555 B SG CYS 60 I CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf19 B SG CYS 73 I CYS 75 1_555 B SG CYS 89 I CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
disulf ? disulf20 B SG CYS 88 I CYS 90 1_555 B SG CYS 99 I CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf21 B SG CYS 122 I CYS 124 1_555 B SG CYS 167 I CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf22 B SG CYS 166 I CYS 168 1_555 B SG CYS 175 I CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf23 B SG CYS 198 I CYS 200 1_555 B SG CYS 244 I CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf24 B SG CYS 243 I CYS 245 1_555 B SG CYS 251 I CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf25 B SG CYS 263 I CYS 265 1_555 B SG CYS 277 I CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf26 B SG CYS 276 I CYS 278 1_555 B SG CYS 287 I CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
disulf ? disulf27 B SG CYS 314 I CYS 316 1_555 B SG CYS 359 I CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
disulf ? disulf28 B SG CYS 358 I CYS 360 1_555 B SG CYS 367 I CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
disulf ? disulf29 B SG CYS 390 I CYS 392 1_555 B SG CYS 436 I CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf30 B SG CYS 435 I CYS 437 1_555 B SG CYS 446 I CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf31 B SG CYS 459 I CYS 461 1_555 B SG CYS 475 I CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf32 B SG CYS 474 I CYS 476 1_555 B SG CYS 485 I CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
disulf ? disulf33 B SG CYS 512 I CYS 514 1_555 B SG CYS 557 I CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf34 B SG CYS 556 I CYS 558 1_555 B SG CYS 565 I CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
metalc ? metalc1 A NE2 HIS 240 A HIS 242 1_555 I CU E5O . A E5O 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
#
_chem_comp.formula           'C16 H32 O2' 
_chem_comp.formula_weight    256.424 
_chem_comp.id                PLM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PLM sing 295 n n 
C1 O2 PLM doub 296 n n 
C1 C2 PLM sing 297 n n 
O1 H PLM sing 298 n n 
C2 C3 PLM sing 299 n n 
C2 H21 PLM sing 300 n n 
C2 H22 PLM sing 301 n n 
C3 C4 PLM sing 302 n n 
C3 H31 PLM sing 303 n n 
C3 H32 PLM sing 304 n n 
C4 C5 PLM sing 305 n n 
C4 H41 PLM sing 306 n n 
C4 H42 PLM sing 307 n n 
C5 C6 PLM sing 308 n n 
C5 H51 PLM sing 309 n n 
C5 H52 PLM sing 310 n n 
C6 C7 PLM sing 311 n n 
C6 H61 PLM sing 312 n n 
C6 H62 PLM sing 313 n n 
C7 C8 PLM sing 314 n n 
C7 H71 PLM sing 315 n n 
C7 H72 PLM sing 316 n n 
C8 C9 PLM sing 317 n n 
C8 H81 PLM sing 318 n n 
C8 H82 PLM sing 319 n n 
C9 CA PLM sing 320 n n 
C9 H91 PLM sing 321 n n 
C9 H92 PLM sing 322 n n 
CA CB PLM sing 323 n n 
CA HA1 PLM sing 324 n n 
CA HA2 PLM sing 325 n n 
CB CC PLM sing 326 n n 
CB HB1 PLM sing 327 n n 
CB HB2 PLM sing 328 n n 
CC CD PLM sing 329 n n 
CC HC1 PLM sing 330 n n 
CC HC2 PLM sing 331 n n 
CD CE PLM sing 332 n n 
CD HD1 PLM sing 333 n n 
CD HD2 PLM sing 334 n n 
CE CF PLM sing 335 n n 
CE HE1 PLM sing 336 n n 
CE HE2 PLM sing 337 n n 
CF CG PLM sing 338 n n 
CF HF1 PLM sing 339 n n 
CF HF2 PLM sing 340 n n 
CG HG1 PLM sing 341 n n 
CG HG2 PLM sing 342 n n 
CG HG3 PLM sing 343 n n 
#
_atom_sites.entry_id                     6L4K 
_atom_sites.fract_transf_matrix[1][1]    0.026072 
_atom_sites.fract_transf_matrix[1][2]    -0.004577 
_atom_sites.fract_transf_matrix[1][3]    0.001098 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010856 
_atom_sites.fract_transf_matrix[2][3]    -0.002967 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010759 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PLM A 1 1001 1001 PLM PLM . 
D 2 PLM A 1 1002 1002 PLM PLM . 
E 2 PLM A 1 1003 1003 PLM PLM . 
F 2 PLM A 1 1004 1004 PLM PLM . 
G 2 PLM A 1 1005 1005 PLM PLM . 
H 2 PLM A 1 1006 1006 PLM PLM . 
I 3 E5O A 1 1007 1 E5O Cu2 . 
J 2 PLM I 1 1001 1001 PLM PLM . 
K 2 PLM I 1 1002 1002 PLM PLM . 
L 2 PLM I 1 1003 1003 PLM PLM . 
M 2 PLM I 1 1004 1004 PLM PLM . 
N 2 PLM I 1 1005 1005 PLM PLM . 
O 2 PLM I 1 1006 1006 PLM PLM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLM . . . H 2 -10.226 -4.896 18.12 1 67.98 ? C1 PLM 1006 A 1 
HETATM 2 O O1 PLM . . . H 2 -10.748 -3.813 17.783 1 64.32 ? O1 PLM 1006 A 1 
HETATM 3 O O2 PLM . . . H 2 -10.76 -5.615 19.014 1 58.84 ? O2 PLM 1006 A 1 
HETATM 4 C C2 PLM . . . H 2 -8.944 -5.342 17.392 1 63.48 ? C2 PLM 1006 A 1 
HETATM 5 C C3 PLM . . . H 2 -7.881 -4.236 17.159 1 54.46 ? C3 PLM 1006 A 1 
HETATM 6 C C4 PLM . . . H 2 -6.456 -4.571 17.664 1 52.43 ? C4 PLM 1006 A 1 
HETATM 7 C C5 PLM . . . H 2 -6.449 -5.103 19.115 1 49.65 ? C5 PLM 1006 A 1 
HETATM 8 C C6 PLM . . . H 2 -5.158 -4.863 19.882 1 47.89 ? C6 PLM 1006 A 1 
HETATM 9 C C7 PLM . . . H 2 -5.347 -5.006 21.399 1 48.76 ? C7 PLM 1006 A 1 
HETATM 10 C C8 PLM . . . H 2 -4.285 -4.198 22.155 1 46.21 ? C8 PLM 1006 A 1 
HETATM 11 C C9 PLM . . . H 2 -4.796 -2.783 22.432 1 46.29 ? C9 PLM 1006 A 1 
HETATM 12 C CA PLM . . . H 2 -3.675 -1.803 22.776 1 44.83 ? CA PLM 1006 A 1 
HETATM 13 C CB PLM . . . H 2 -4.235 -0.39 22.933 1 46.44 ? CB PLM 1006 A 1 
HETATM 14 C CC PLM . . . H 2 -3.085 0.623 22.88 1 48.15 ? CC PLM 1006 A 1 
HETATM 15 C CD PLM . . . H 2 -3.535 2.065 23.024 1 45.74 ? CD PLM 1006 A 1 
HETATM 16 C CE PLM . . . H 2 -2.381 3.037 22.806 1 45.44 ? CE PLM 1006 A 1 
HETATM 17 C CF PLM . . . H 2 -1.488 3.213 24.03 1 48.74 ? CF PLM 1006 A 1 
HETATM 18 C CG PLM . . . H 2 -0.228 4.035 23.735 1 45.57 ? CG PLM 1006 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           362 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           18 
#