data_6L4L # _model_server_result.job_id wK89fUH5LK7aH2P2W7AMJg _model_server_result.datetime_utc '2024-11-22 16:56:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l4l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6L4L # _exptl.entry_id 6L4L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.91 _cell.angle_gamma 90 _cell.entry_id 6L4L _cell.length_a 70.748 _cell.length_b 60.293 _cell.length_c 76.991 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L4L _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 72 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 72 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 211 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 211 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.081 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6L4L _atom_sites.fract_transf_matrix[1][1] 0.014135 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007174 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016586 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014566 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 6 EDO EDO . C 2 EDO A 1 302 7 EDO EDO . D 3 HOH A 1 401 34 HOH HOH . D 3 HOH A 2 402 36 HOH HOH . D 3 HOH A 3 403 78 HOH HOH . D 3 HOH A 4 404 37 HOH HOH . D 3 HOH A 5 405 21 HOH HOH . D 3 HOH A 6 406 1 HOH HOH . D 3 HOH A 7 407 38 HOH HOH . D 3 HOH A 8 408 3 HOH HOH . D 3 HOH A 9 409 33 HOH HOH . D 3 HOH A 10 410 35 HOH HOH . D 3 HOH A 11 411 27 HOH HOH . D 3 HOH A 12 412 72 HOH HOH . D 3 HOH A 13 413 7 HOH HOH . D 3 HOH A 14 414 81 HOH HOH . D 3 HOH A 15 415 8 HOH HOH . D 3 HOH A 16 416 9 HOH HOH . D 3 HOH A 17 417 15 HOH HOH . D 3 HOH A 18 418 18 HOH HOH . D 3 HOH A 19 419 40 HOH HOH . D 3 HOH A 20 420 2 HOH HOH . D 3 HOH A 21 421 22 HOH HOH . D 3 HOH A 22 422 48 HOH HOH . D 3 HOH A 23 423 58 HOH HOH . D 3 HOH A 24 424 5 HOH HOH . D 3 HOH A 25 425 6 HOH HOH . D 3 HOH A 26 426 28 HOH HOH . D 3 HOH A 27 427 49 HOH HOH . D 3 HOH A 28 428 26 HOH HOH . D 3 HOH A 29 429 61 HOH HOH . D 3 HOH A 30 430 24 HOH HOH . D 3 HOH A 31 431 20 HOH HOH . D 3 HOH A 32 432 54 HOH HOH . D 3 HOH A 33 433 25 HOH HOH . D 3 HOH A 34 434 42 HOH HOH . D 3 HOH A 35 435 29 HOH HOH . D 3 HOH A 36 436 39 HOH HOH . D 3 HOH A 37 437 12 HOH HOH . D 3 HOH A 38 438 32 HOH HOH . D 3 HOH A 39 439 68 HOH HOH . D 3 HOH A 40 440 17 HOH HOH . D 3 HOH A 41 441 19 HOH HOH . D 3 HOH A 42 442 13 HOH HOH . D 3 HOH A 43 443 4 HOH HOH . D 3 HOH A 44 444 30 HOH HOH . D 3 HOH A 45 445 11 HOH HOH . D 3 HOH A 46 446 46 HOH HOH . D 3 HOH A 47 447 69 HOH HOH . D 3 HOH A 48 448 50 HOH HOH . D 3 HOH A 49 449 41 HOH HOH . D 3 HOH A 50 450 65 HOH HOH . D 3 HOH A 51 451 60 HOH HOH . D 3 HOH A 52 452 66 HOH HOH . D 3 HOH A 53 453 51 HOH HOH . D 3 HOH A 54 454 74 HOH HOH . D 3 HOH A 55 455 53 HOH HOH . D 3 HOH A 56 456 45 HOH HOH . D 3 HOH A 57 457 70 HOH HOH . D 3 HOH A 58 458 76 HOH HOH . D 3 HOH A 59 459 55 HOH HOH . D 3 HOH A 60 460 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 15.494 8.316 4.617 1 38.84 ? C1 EDO 301 A 1 HETATM 2 O O1 EDO . . . B 2 16.241 8.11 3.436 1 40.35 ? O1 EDO 301 A 1 HETATM 3 C C2 EDO . . . B 2 15.106 9.742 4.774 1 37.53 ? C2 EDO 301 A 1 HETATM 4 O O2 EDO . . . B 2 14.59 10.247 3.564 1 40.31 ? O2 EDO 301 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #