data_6L50 # _model_server_result.job_id tnpXYR-u0Rxl-WNZ5egTlw _model_server_result.datetime_utc '2024-11-08 11:58:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l50 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":201}' # _entry.id 6L50 # _exptl.entry_id 6L50 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 133.192 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-sulfanylidene-1,3-thiazolidin-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6L50 _cell.length_a 59.744 _cell.length_b 59.909 _cell.length_c 214.833 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L50 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,J,K 1 1 C,D,L,M 2 1 E,F,N,O 3 1 G,H,I,P,Q 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H3 N O S2' _chem_comp.formula_weight 133.192 _chem_comp.id E60 _chem_comp.mon_nstd_flag . _chem_comp.name 2-sulfanylidene-1,3-thiazolidin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAE SAA E60 sing 83 n n CAE CAF E60 sing 84 n n SAA CAG E60 sing 85 n n CAF OAC E60 doub 86 n n CAF NAD E60 sing 87 n n CAG NAD E60 sing 88 n n CAG SAB E60 doub 89 n n CAE H1 E60 sing 90 n n NAD H2 E60 sing 91 n n CAE H3 E60 sing 92 n n # _atom_sites.entry_id 6L50 _atom_sites.fract_transf_matrix[1][1] 0.016738 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016692 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 E60 H 1 201 201 E60 DRG . J 4 HOH A 1 101 14 HOH HOH . J 4 HOH A 2 102 43 HOH HOH . J 4 HOH A 3 103 41 HOH HOH . J 4 HOH A 4 104 61 HOH HOH . K 4 HOH B 1 201 30 HOH HOH . K 4 HOH B 2 202 25 HOH HOH . K 4 HOH B 3 203 20 HOH HOH . K 4 HOH B 4 204 26 HOH HOH . K 4 HOH B 5 205 27 HOH HOH . K 4 HOH B 6 206 67 HOH HOH . K 4 HOH B 7 207 52 HOH HOH . K 4 HOH B 8 208 49 HOH HOH . K 4 HOH B 9 209 37 HOH HOH . K 4 HOH B 10 210 35 HOH HOH . K 4 HOH B 11 211 70 HOH HOH . K 4 HOH B 12 212 42 HOH HOH . K 4 HOH B 13 213 18 HOH HOH . L 4 HOH C 1 101 38 HOH HOH . M 4 HOH D 1 201 39 HOH HOH . M 4 HOH D 2 202 54 HOH HOH . M 4 HOH D 3 203 36 HOH HOH . M 4 HOH D 4 204 13 HOH HOH . M 4 HOH D 5 205 56 HOH HOH . M 4 HOH D 6 206 32 HOH HOH . N 4 HOH E 1 101 53 HOH HOH . N 4 HOH E 2 102 8 HOH HOH . N 4 HOH E 3 103 69 HOH HOH . N 4 HOH E 4 104 40 HOH HOH . O 4 HOH F 1 201 9 HOH HOH . O 4 HOH F 2 202 3 HOH HOH . O 4 HOH F 3 203 64 HOH HOH . O 4 HOH F 4 204 62 HOH HOH . O 4 HOH F 5 205 12 HOH HOH . O 4 HOH F 6 206 15 HOH HOH . O 4 HOH F 7 207 48 HOH HOH . O 4 HOH F 8 208 33 HOH HOH . O 4 HOH F 9 209 6 HOH HOH . O 4 HOH F 10 210 58 HOH HOH . O 4 HOH F 11 211 17 HOH HOH . O 4 HOH F 12 212 57 HOH HOH . O 4 HOH F 13 213 68 HOH HOH . O 4 HOH F 14 214 24 HOH HOH . O 4 HOH F 15 215 22 HOH HOH . O 4 HOH F 16 216 44 HOH HOH . P 4 HOH G 1 101 46 HOH HOH . P 4 HOH G 2 102 60 HOH HOH . P 4 HOH G 3 103 50 HOH HOH . P 4 HOH G 4 104 45 HOH HOH . P 4 HOH G 5 105 28 HOH HOH . Q 4 HOH H 1 301 51 HOH HOH . Q 4 HOH H 2 302 65 HOH HOH . Q 4 HOH H 3 303 47 HOH HOH . Q 4 HOH H 4 304 4 HOH HOH . Q 4 HOH H 5 305 21 HOH HOH . Q 4 HOH H 6 306 10 HOH HOH . Q 4 HOH H 7 307 7 HOH HOH . Q 4 HOH H 8 308 63 HOH HOH . Q 4 HOH H 9 309 19 HOH HOH . Q 4 HOH H 10 310 31 HOH HOH . Q 4 HOH H 11 311 34 HOH HOH . Q 4 HOH H 12 312 71 HOH HOH . Q 4 HOH H 13 313 5 HOH HOH . Q 4 HOH H 14 314 2 HOH HOH . Q 4 HOH H 15 315 59 HOH HOH . Q 4 HOH H 16 316 1 HOH HOH . Q 4 HOH H 17 317 23 HOH HOH . Q 4 HOH H 18 318 11 HOH HOH . Q 4 HOH H 19 319 29 HOH HOH . Q 4 HOH H 20 320 66 HOH HOH . Q 4 HOH H 21 321 16 HOH HOH . Q 4 HOH H 22 322 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAE E60 . . . I 3 -27.843 -32.449 9.682 1 36.03 ? CAE E60 201 H 1 HETATM 2 C CAF E60 . . . I 3 -28.108 -32.754 8.339 1 30.9 ? CAF E60 201 H 1 HETATM 3 C CAG E60 . . . I 3 -26.865 -30.911 7.9 1 38.4 ? CAG E60 201 H 1 HETATM 4 N NAD E60 . . . I 3 -27.582 -31.929 7.412 1 32.5 ? NAD E60 201 H 1 HETATM 5 O OAC E60 . . . I 3 -28.787 -33.728 8.017 1 26.06 ? OAC E60 201 H 1 HETATM 6 S SAA E60 . . . I 3 -26.825 -30.954 9.561 1 40.44 ? SAA E60 201 H 1 HETATM 7 S SAB E60 . . . I 3 -26.091 -29.716 6.936 1 42.03 ? SAB E60 201 H 1 # _model_server_stats.io_time_ms 121 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 7 #