data_6L57
#
_model_server_result.job_id            lL3voxTL7hlc3cM30ZdXbA 
_model_server_result.datetime_utc      '2024-12-08 16:42:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6l57 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    6L57 
#
_exptl.entry_id    6L57 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6L57 
_cell.length_a            104.211 
_cell.length_b            104.211 
_cell.length_c            145.547 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6L57 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASP 233 A ASP 230 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.895 ? 
metalc ? metalc2 A OD1 ASP 233 A ASP 230 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? 
metalc ? metalc3 A OD2 ASP 237 A ASP 234 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? 
metalc ? metalc4 C MG MG . A MG 401 1_555 B OD2 ASP 218 B ASP 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
metalc ? metalc5 B OD1 ASN 81 B ASN 78 1_555 E MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? 
metalc ? metalc6 B O ARG 275 B ARG 272 1_555 E MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? 
metalc ? metalc7 E MG MG . B MG 402 1_555 H O HOH . B HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? 
metalc ? metalc8 E MG MG . B MG 402 1_555 H O HOH . B HOH 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 119 n n 
C1 O2 CIT sing 120 n n 
C1 C2 CIT sing 121 n n 
O2 HO2 CIT sing 122 n n 
C2 C3 CIT sing 123 n n 
C2 H21 CIT sing 124 n n 
C2 H22 CIT sing 125 n n 
C3 O7 CIT sing 126 n n 
C3 C4 CIT sing 127 n n 
C3 C6 CIT sing 128 n n 
O7 HO7 CIT sing 129 n n 
C4 C5 CIT sing 130 n n 
C4 H41 CIT sing 131 n n 
C4 H42 CIT sing 132 n n 
C5 O3 CIT doub 133 n n 
C5 O4 CIT sing 134 n n 
O4 HO4 CIT sing 135 n n 
C6 O5 CIT doub 136 n n 
C6 O6 CIT sing 137 n n 
O6 HO6 CIT sing 138 n n 
#
_atom_sites.entry_id                     6L57 
_atom_sites.fract_transf_matrix[1][1]    0.009596 
_atom_sites.fract_transf_matrix[1][2]    0.00554 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01108 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006871 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MG A 1 401 2 MG MG . 
D 4 CIT B 1 401 1 CIT CIT . 
E 3 MG B 1 402 1 MG MG . 
F 5 ATP B 1 403 1 ATP ATP . 
G 6 HOH A 1 501 111 HOH HOH . 
G 6 HOH A 2 502 76 HOH HOH . 
G 6 HOH A 3 503 99 HOH HOH . 
G 6 HOH A 4 504 46 HOH HOH . 
G 6 HOH A 5 505 47 HOH HOH . 
G 6 HOH A 6 506 56 HOH HOH . 
G 6 HOH A 7 507 50 HOH HOH . 
G 6 HOH A 8 508 11 HOH HOH . 
G 6 HOH A 9 509 35 HOH HOH . 
G 6 HOH A 10 510 65 HOH HOH . 
G 6 HOH A 11 511 124 HOH HOH . 
G 6 HOH A 12 512 83 HOH HOH . 
G 6 HOH A 13 513 23 HOH HOH . 
G 6 HOH A 14 514 61 HOH HOH . 
G 6 HOH A 15 515 62 HOH HOH . 
G 6 HOH A 16 516 118 HOH HOH . 
G 6 HOH A 17 517 123 HOH HOH . 
G 6 HOH A 18 518 49 HOH HOH . 
G 6 HOH A 19 519 53 HOH HOH . 
G 6 HOH A 20 520 97 HOH HOH . 
G 6 HOH A 21 521 42 HOH HOH . 
G 6 HOH A 22 522 51 HOH HOH . 
G 6 HOH A 23 523 26 HOH HOH . 
G 6 HOH A 24 524 84 HOH HOH . 
G 6 HOH A 25 525 58 HOH HOH . 
G 6 HOH A 26 526 86 HOH HOH . 
G 6 HOH A 27 527 82 HOH HOH . 
G 6 HOH A 28 528 14 HOH HOH . 
G 6 HOH A 29 529 37 HOH HOH . 
G 6 HOH A 30 530 64 HOH HOH . 
G 6 HOH A 31 531 89 HOH HOH . 
G 6 HOH A 32 532 93 HOH HOH . 
G 6 HOH A 33 533 34 HOH HOH . 
G 6 HOH A 34 534 102 HOH HOH . 
G 6 HOH A 35 535 115 HOH HOH . 
G 6 HOH A 36 536 40 HOH HOH . 
G 6 HOH A 37 537 117 HOH HOH . 
G 6 HOH A 38 538 98 HOH HOH . 
G 6 HOH A 39 539 57 HOH HOH . 
G 6 HOH A 40 540 31 HOH HOH . 
G 6 HOH A 41 541 63 HOH HOH . 
G 6 HOH A 42 542 105 HOH HOH . 
G 6 HOH A 43 543 106 HOH HOH . 
G 6 HOH A 44 544 91 HOH HOH . 
G 6 HOH A 45 545 72 HOH HOH . 
G 6 HOH A 46 546 90 HOH HOH . 
H 6 HOH B 1 501 85 HOH HOH . 
H 6 HOH B 2 502 45 HOH HOH . 
H 6 HOH B 3 503 96 HOH HOH . 
H 6 HOH B 4 504 24 HOH HOH . 
H 6 HOH B 5 505 15 HOH HOH . 
H 6 HOH B 6 506 94 HOH HOH . 
H 6 HOH B 7 507 43 HOH HOH . 
H 6 HOH B 8 508 67 HOH HOH . 
H 6 HOH B 9 509 95 HOH HOH . 
H 6 HOH B 10 510 41 HOH HOH . 
H 6 HOH B 11 511 80 HOH HOH . 
H 6 HOH B 12 512 75 HOH HOH . 
H 6 HOH B 13 513 2 HOH HOH . 
H 6 HOH B 14 514 3 HOH HOH . 
H 6 HOH B 15 515 1 HOH HOH . 
H 6 HOH B 16 516 16 HOH HOH . 
H 6 HOH B 17 517 92 HOH HOH . 
H 6 HOH B 18 518 52 HOH HOH . 
H 6 HOH B 19 519 9 HOH HOH . 
H 6 HOH B 20 520 122 HOH HOH . 
H 6 HOH B 21 521 38 HOH HOH . 
H 6 HOH B 22 522 22 HOH HOH . 
H 6 HOH B 23 523 12 HOH HOH . 
H 6 HOH B 24 524 5 HOH HOH . 
H 6 HOH B 25 525 25 HOH HOH . 
H 6 HOH B 26 526 6 HOH HOH . 
H 6 HOH B 27 527 39 HOH HOH . 
H 6 HOH B 28 528 7 HOH HOH . 
H 6 HOH B 29 529 18 HOH HOH . 
H 6 HOH B 30 530 27 HOH HOH . 
H 6 HOH B 31 531 17 HOH HOH . 
H 6 HOH B 32 532 10 HOH HOH . 
H 6 HOH B 33 533 113 HOH HOH . 
H 6 HOH B 34 534 13 HOH HOH . 
H 6 HOH B 35 535 54 HOH HOH . 
H 6 HOH B 36 536 33 HOH HOH . 
H 6 HOH B 37 537 55 HOH HOH . 
H 6 HOH B 38 538 104 HOH HOH . 
H 6 HOH B 39 539 29 HOH HOH . 
H 6 HOH B 40 540 109 HOH HOH . 
H 6 HOH B 41 541 73 HOH HOH . 
H 6 HOH B 42 542 20 HOH HOH . 
H 6 HOH B 43 543 60 HOH HOH . 
H 6 HOH B 44 544 4 HOH HOH . 
H 6 HOH B 45 545 44 HOH HOH . 
H 6 HOH B 46 546 48 HOH HOH . 
H 6 HOH B 47 547 74 HOH HOH . 
H 6 HOH B 48 548 30 HOH HOH . 
H 6 HOH B 49 549 19 HOH HOH . 
H 6 HOH B 50 550 21 HOH HOH . 
H 6 HOH B 51 551 120 HOH HOH . 
H 6 HOH B 52 552 32 HOH HOH . 
H 6 HOH B 53 553 101 HOH HOH . 
H 6 HOH B 54 554 28 HOH HOH . 
H 6 HOH B 55 555 100 HOH HOH . 
H 6 HOH B 56 556 81 HOH HOH . 
H 6 HOH B 57 557 68 HOH HOH . 
H 6 HOH B 58 558 66 HOH HOH . 
H 6 HOH B 59 559 71 HOH HOH . 
H 6 HOH B 60 560 8 HOH HOH . 
H 6 HOH B 61 561 70 HOH HOH . 
H 6 HOH B 62 562 108 HOH HOH . 
H 6 HOH B 63 563 36 HOH HOH . 
H 6 HOH B 64 564 88 HOH HOH . 
H 6 HOH B 65 565 59 HOH HOH . 
H 6 HOH B 66 566 77 HOH HOH . 
H 6 HOH B 67 567 121 HOH HOH . 
H 6 HOH B 68 568 78 HOH HOH . 
H 6 HOH B 69 569 69 HOH HOH . 
H 6 HOH B 70 570 125 HOH HOH . 
H 6 HOH B 71 571 119 HOH HOH . 
H 6 HOH B 72 572 87 HOH HOH . 
H 6 HOH B 73 573 107 HOH HOH . 
H 6 HOH B 74 574 103 HOH HOH . 
H 6 HOH B 75 575 110 HOH HOH . 
H 6 HOH B 76 576 114 HOH HOH . 
H 6 HOH B 77 577 79 HOH HOH . 
H 6 HOH B 78 578 112 HOH HOH . 
H 6 HOH B 79 579 116 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . D 4 -10.563 -41.197 -19.98 1 49.71 ? C1 CIT 401 B 1 
HETATM 2 O O1 CIT . . . D 4 -10.204 -40.176 -20.583 1 56.2 ? O1 CIT 401 B 1 
HETATM 3 O O2 CIT . . . D 4 -11.739 -41.586 -20.136 1 46.85 ? O2 CIT 401 B 1 
HETATM 4 C C2 CIT . . . D 4 -9.567 -41.897 -19.068 1 50.2 ? C2 CIT 401 B 1 
HETATM 5 C C3 CIT . . . D 4 -9.903 -43.366 -18.922 1 43.99 ? C3 CIT 401 B 1 
HETATM 6 O O7 CIT . . . D 4 -11.131 -43.582 -18.15 1 44.45 ? O7 CIT 401 B 1 
HETATM 7 C C4 CIT . . . D 4 -8.676 -44.134 -18.459 1 38.72 ? C4 CIT 401 B 1 
HETATM 8 C C5 CIT . . . D 4 -8.669 -44.27 -16.959 1 38.75 ? C5 CIT 401 B 1 
HETATM 9 O O3 CIT . . . D 4 -9.01 -45.363 -16.474 1 35.6 ? O3 CIT 401 B 1 
HETATM 10 O O4 CIT . . . D 4 -8.311 -43.32 -16.232 1 39.89 ? O4 CIT 401 B 1 
HETATM 11 C C6 CIT . . . D 4 -10.187 -43.924 -20.272 1 51.83 ? C6 CIT 401 B 1 
HETATM 12 O O5 CIT . . . D 4 -9.518 -43.554 -21.288 1 49.56 ? O5 CIT 401 B 1 
HETATM 13 O O6 CIT . . . D 4 -11.128 -44.763 -20.292 1 52.12 ? O6 CIT 401 B 1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           13 
#