data_6L59 # _model_server_result.job_id X1PJ25CbVwaZY91e8zb8Eg _model_server_result.datetime_utc '2024-11-16 22:41:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l59 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 6L59 # _exptl.entry_id 6L59 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6L59 _cell.length_a 111.964 _cell.length_b 111.964 _cell.length_c 145.578 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L59 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 233 A ASP 230 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc2 A OD1 ASP 233 A ASP 230 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc3 A OD2 ASP 237 A ASP 234 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc4 D MG MG . A MG 402 1_555 B OD2 ASP 218 B ASP 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc5 H O HOH . A HOH 540 1_555 F MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc6 B OD1 ASN 81 B ASN 78 1_555 F MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc7 B O ARG 275 B ARG 272 1_555 F MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc8 F MG MG . B MG 402 1_555 G O5 CIT . B CIT 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? metalc ? metalc9 F MG MG . B MG 402 1_555 I O HOH . B HOH 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6L59 _atom_sites.fract_transf_matrix[1][1] 0.008931 _atom_sites.fract_transf_matrix[1][2] 0.005157 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010313 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006869 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ATP A 1 401 1 ATP ATP . D 4 MG A 1 402 1 MG MG . E 3 ATP B 1 401 2 ATP ATP . F 4 MG B 1 402 2 MG MG . G 5 CIT B 1 403 1 CIT CIT . H 6 HOH A 1 501 39 HOH HOH . H 6 HOH A 2 502 134 HOH HOH . H 6 HOH A 3 503 123 HOH HOH . H 6 HOH A 4 504 173 HOH HOH . H 6 HOH A 5 505 79 HOH HOH . H 6 HOH A 6 506 200 HOH HOH . H 6 HOH A 7 507 177 HOH HOH . H 6 HOH A 8 508 111 HOH HOH . H 6 HOH A 9 509 36 HOH HOH . H 6 HOH A 10 510 82 HOH HOH . H 6 HOH A 11 511 147 HOH HOH . H 6 HOH A 12 512 84 HOH HOH . H 6 HOH A 13 513 57 HOH HOH . H 6 HOH A 14 514 64 HOH HOH . H 6 HOH A 15 515 128 HOH HOH . H 6 HOH A 16 516 61 HOH HOH . H 6 HOH A 17 517 170 HOH HOH . H 6 HOH A 18 518 94 HOH HOH . H 6 HOH A 19 519 99 HOH HOH . H 6 HOH A 20 520 22 HOH HOH . H 6 HOH A 21 521 98 HOH HOH . H 6 HOH A 22 522 50 HOH HOH . H 6 HOH A 23 523 3 HOH HOH . H 6 HOH A 24 524 85 HOH HOH . H 6 HOH A 25 525 181 HOH HOH . H 6 HOH A 26 526 34 HOH HOH . H 6 HOH A 27 527 52 HOH HOH . H 6 HOH A 28 528 174 HOH HOH . H 6 HOH A 29 529 51 HOH HOH . H 6 HOH A 30 530 16 HOH HOH . H 6 HOH A 31 531 92 HOH HOH . H 6 HOH A 32 532 114 HOH HOH . H 6 HOH A 33 533 58 HOH HOH . H 6 HOH A 34 534 136 HOH HOH . H 6 HOH A 35 535 168 HOH HOH . H 6 HOH A 36 536 195 HOH HOH . H 6 HOH A 37 537 135 HOH HOH . H 6 HOH A 38 538 30 HOH HOH . H 6 HOH A 39 539 141 HOH HOH . H 6 HOH A 40 540 4 HOH HOH . H 6 HOH A 41 541 196 HOH HOH . H 6 HOH A 42 542 126 HOH HOH . H 6 HOH A 43 543 180 HOH HOH . I 6 HOH B 1 501 5 HOH HOH . I 6 HOH B 2 502 157 HOH HOH . I 6 HOH B 3 503 80 HOH HOH . I 6 HOH B 4 504 66 HOH HOH . I 6 HOH B 5 505 40 HOH HOH . I 6 HOH B 6 506 113 HOH HOH . I 6 HOH B 7 507 37 HOH HOH . I 6 HOH B 8 508 151 HOH HOH . I 6 HOH B 9 509 20 HOH HOH . I 6 HOH B 10 510 73 HOH HOH . I 6 HOH B 11 511 175 HOH HOH . I 6 HOH B 12 512 29 HOH HOH . I 6 HOH B 13 513 13 HOH HOH . I 6 HOH B 14 514 119 HOH HOH . I 6 HOH B 15 515 153 HOH HOH . I 6 HOH B 16 516 15 HOH HOH . I 6 HOH B 17 517 46 HOH HOH . I 6 HOH B 18 518 24 HOH HOH . I 6 HOH B 19 519 7 HOH HOH . I 6 HOH B 20 520 145 HOH HOH . I 6 HOH B 21 521 10 HOH HOH . I 6 HOH B 22 522 49 HOH HOH . I 6 HOH B 23 523 43 HOH HOH . I 6 HOH B 24 524 8 HOH HOH . I 6 HOH B 25 525 182 HOH HOH . I 6 HOH B 26 526 45 HOH HOH . I 6 HOH B 27 527 144 HOH HOH . I 6 HOH B 28 528 71 HOH HOH . I 6 HOH B 29 529 21 HOH HOH . I 6 HOH B 30 530 149 HOH HOH . I 6 HOH B 31 531 9 HOH HOH . I 6 HOH B 32 532 59 HOH HOH . I 6 HOH B 33 533 89 HOH HOH . I 6 HOH B 34 534 33 HOH HOH . I 6 HOH B 35 535 78 HOH HOH . I 6 HOH B 36 536 2 HOH HOH . I 6 HOH B 37 537 31 HOH HOH . I 6 HOH B 38 538 185 HOH HOH . I 6 HOH B 39 539 96 HOH HOH . I 6 HOH B 40 540 112 HOH HOH . I 6 HOH B 41 541 54 HOH HOH . I 6 HOH B 42 542 67 HOH HOH . I 6 HOH B 43 543 152 HOH HOH . I 6 HOH B 44 544 131 HOH HOH . I 6 HOH B 45 545 56 HOH HOH . I 6 HOH B 46 546 28 HOH HOH . I 6 HOH B 47 547 19 HOH HOH . I 6 HOH B 48 548 12 HOH HOH . I 6 HOH B 49 549 102 HOH HOH . I 6 HOH B 50 550 90 HOH HOH . I 6 HOH B 51 551 17 HOH HOH . I 6 HOH B 52 552 11 HOH HOH . I 6 HOH B 53 553 32 HOH HOH . I 6 HOH B 54 554 47 HOH HOH . I 6 HOH B 55 555 107 HOH HOH . I 6 HOH B 56 556 27 HOH HOH . I 6 HOH B 57 557 93 HOH HOH . I 6 HOH B 58 558 143 HOH HOH . I 6 HOH B 59 559 35 HOH HOH . I 6 HOH B 60 560 188 HOH HOH . I 6 HOH B 61 561 95 HOH HOH . I 6 HOH B 62 562 26 HOH HOH . I 6 HOH B 63 563 6 HOH HOH . I 6 HOH B 64 564 83 HOH HOH . I 6 HOH B 65 565 97 HOH HOH . I 6 HOH B 66 566 108 HOH HOH . I 6 HOH B 67 567 23 HOH HOH . I 6 HOH B 68 568 191 HOH HOH . I 6 HOH B 69 569 41 HOH HOH . I 6 HOH B 70 570 70 HOH HOH . I 6 HOH B 71 571 103 HOH HOH . I 6 HOH B 72 572 60 HOH HOH . I 6 HOH B 73 573 69 HOH HOH . I 6 HOH B 74 574 133 HOH HOH . I 6 HOH B 75 575 55 HOH HOH . I 6 HOH B 76 576 14 HOH HOH . I 6 HOH B 77 577 198 HOH HOH . I 6 HOH B 78 578 159 HOH HOH . I 6 HOH B 79 579 117 HOH HOH . I 6 HOH B 80 580 1 HOH HOH . I 6 HOH B 81 581 192 HOH HOH . I 6 HOH B 82 582 155 HOH HOH . I 6 HOH B 83 583 100 HOH HOH . I 6 HOH B 84 584 53 HOH HOH . I 6 HOH B 85 585 18 HOH HOH . I 6 HOH B 86 586 148 HOH HOH . I 6 HOH B 87 587 183 HOH HOH . I 6 HOH B 88 588 42 HOH HOH . I 6 HOH B 89 589 75 HOH HOH . I 6 HOH B 90 590 25 HOH HOH . I 6 HOH B 91 591 138 HOH HOH . I 6 HOH B 92 592 172 HOH HOH . I 6 HOH B 93 593 127 HOH HOH . I 6 HOH B 94 594 65 HOH HOH . I 6 HOH B 95 595 154 HOH HOH . I 6 HOH B 96 596 91 HOH HOH . I 6 HOH B 97 597 178 HOH HOH . I 6 HOH B 98 598 130 HOH HOH . I 6 HOH B 99 599 87 HOH HOH . I 6 HOH B 100 600 86 HOH HOH . I 6 HOH B 101 601 129 HOH HOH . I 6 HOH B 102 602 124 HOH HOH . I 6 HOH B 103 603 121 HOH HOH . I 6 HOH B 104 604 179 HOH HOH . I 6 HOH B 105 605 116 HOH HOH . I 6 HOH B 106 606 167 HOH HOH . I 6 HOH B 107 607 72 HOH HOH . I 6 HOH B 108 608 150 HOH HOH . I 6 HOH B 109 609 104 HOH HOH . I 6 HOH B 110 610 76 HOH HOH . I 6 HOH B 111 611 158 HOH HOH . I 6 HOH B 112 612 106 HOH HOH . I 6 HOH B 113 613 166 HOH HOH . I 6 HOH B 114 614 139 HOH HOH . I 6 HOH B 115 615 63 HOH HOH . I 6 HOH B 116 616 110 HOH HOH . I 6 HOH B 117 617 165 HOH HOH . I 6 HOH B 118 618 146 HOH HOH . I 6 HOH B 119 619 122 HOH HOH . I 6 HOH B 120 620 125 HOH HOH . I 6 HOH B 121 621 44 HOH HOH . I 6 HOH B 122 622 48 HOH HOH . I 6 HOH B 123 623 184 HOH HOH . I 6 HOH B 124 624 118 HOH HOH . I 6 HOH B 125 625 156 HOH HOH . I 6 HOH B 126 626 176 HOH HOH . I 6 HOH B 127 627 115 HOH HOH . I 6 HOH B 128 628 199 HOH HOH . I 6 HOH B 129 629 68 HOH HOH . I 6 HOH B 130 630 38 HOH HOH . I 6 HOH B 131 631 140 HOH HOH . I 6 HOH B 132 632 137 HOH HOH . I 6 HOH B 133 633 193 HOH HOH . I 6 HOH B 134 634 190 HOH HOH . I 6 HOH B 135 635 194 HOH HOH . I 6 HOH B 136 636 62 HOH HOH . I 6 HOH B 137 637 105 HOH HOH . I 6 HOH B 138 638 169 HOH HOH . I 6 HOH B 139 639 88 HOH HOH . I 6 HOH B 140 640 189 HOH HOH . I 6 HOH B 141 641 120 HOH HOH . I 6 HOH B 142 642 164 HOH HOH . I 6 HOH B 143 643 132 HOH HOH . I 6 HOH B 144 644 142 HOH HOH . I 6 HOH B 145 645 160 HOH HOH . I 6 HOH B 146 646 163 HOH HOH . I 6 HOH B 147 647 109 HOH HOH . I 6 HOH B 148 648 161 HOH HOH . I 6 HOH B 149 649 162 HOH HOH . I 6 HOH B 150 650 187 HOH HOH . I 6 HOH B 151 651 74 HOH HOH . I 6 HOH B 152 652 186 HOH HOH . I 6 HOH B 153 653 101 HOH HOH . I 6 HOH B 154 654 171 HOH HOH . I 6 HOH B 155 655 77 HOH HOH . I 6 HOH B 156 656 81 HOH HOH . I 6 HOH B 157 657 197 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x -36.587 _atom_site.Cartn_y 29.849 _atom_site.Cartn_z 2.39 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #