data_6L67 # _model_server_result.job_id SA8s5e09E1SiRRPeNkIhnQ _model_server_result.datetime_utc '2024-11-20 08:38:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l67 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6L67 # _exptl.entry_id 6L67 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-galactopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6L67 _cell.length_a 48.66 _cell.length_b 48.66 _cell.length_c 259.8 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L67 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 129.9 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GAL _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-galactopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-galactose;D-galactose;galactose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GAL sing 83 n n C1 O1 GAL sing 84 n n C1 O5 GAL sing 85 n n C1 H1 GAL sing 86 n n C2 C3 GAL sing 87 n n C2 O2 GAL sing 88 n n C2 H2 GAL sing 89 n n C3 C4 GAL sing 90 n n C3 O3 GAL sing 91 n n C3 H3 GAL sing 92 n n C4 C5 GAL sing 93 n n C4 O4 GAL sing 94 n n C4 H4 GAL sing 95 n n C5 C6 GAL sing 96 n n C5 O5 GAL sing 97 n n C5 H5 GAL sing 98 n n C6 O6 GAL sing 99 n n C6 H61 GAL sing 100 n n C6 H62 GAL sing 101 n n O1 HO1 GAL sing 102 n n O2 HO2 GAL sing 103 n n O3 HO3 GAL sing 104 n n O4 HO4 GAL sing 105 n n O6 HO6 GAL sing 106 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GAL DGalpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GAL b-D-galactopyranose 'COMMON NAME' GMML 1 GAL b-D-Galp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GAL Gal 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 6L67 _atom_sites.fract_transf_matrix[1][1] 0.020551 _atom_sites.fract_transf_matrix[1][2] 0.011865 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02373 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003849 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GAL A 1 201 201 GAL GAL . C 2 GAL A 1 202 202 GAL GAL . D 3 HOH A 1 301 25 HOH HOH . D 3 HOH A 2 302 26 HOH HOH . D 3 HOH A 3 303 1 HOH HOH . D 3 HOH A 4 304 11 HOH HOH . D 3 HOH A 5 305 30 HOH HOH . D 3 HOH A 6 306 10 HOH HOH . D 3 HOH A 7 307 8 HOH HOH . D 3 HOH A 8 308 40 HOH HOH . D 3 HOH A 9 309 33 HOH HOH . D 3 HOH A 10 310 19 HOH HOH . D 3 HOH A 11 311 6 HOH HOH . D 3 HOH A 12 312 24 HOH HOH . D 3 HOH A 13 313 17 HOH HOH . D 3 HOH A 14 314 38 HOH HOH . D 3 HOH A 15 315 5 HOH HOH . D 3 HOH A 16 316 16 HOH HOH . D 3 HOH A 17 317 9 HOH HOH . D 3 HOH A 18 318 34 HOH HOH . D 3 HOH A 19 319 18 HOH HOH . D 3 HOH A 20 320 4 HOH HOH . D 3 HOH A 21 321 32 HOH HOH . D 3 HOH A 22 322 7 HOH HOH . D 3 HOH A 23 323 36 HOH HOH . D 3 HOH A 24 324 3 HOH HOH . D 3 HOH A 25 325 37 HOH HOH . D 3 HOH A 26 326 20 HOH HOH . D 3 HOH A 27 327 35 HOH HOH . D 3 HOH A 28 328 31 HOH HOH . D 3 HOH A 29 329 39 HOH HOH . D 3 HOH A 30 330 14 HOH HOH . D 3 HOH A 31 331 13 HOH HOH . D 3 HOH A 32 332 42 HOH HOH . D 3 HOH A 33 333 43 HOH HOH . D 3 HOH A 34 334 29 HOH HOH . D 3 HOH A 35 335 27 HOH HOH . D 3 HOH A 36 336 41 HOH HOH . D 3 HOH A 37 337 21 HOH HOH . D 3 HOH A 38 338 12 HOH HOH . D 3 HOH A 39 339 2 HOH HOH . D 3 HOH A 40 340 22 HOH HOH . D 3 HOH A 41 341 15 HOH HOH . D 3 HOH A 42 342 28 HOH HOH . D 3 HOH A 43 343 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GAL . . . B 2 3.21 20.365 73.131 1 40.4 ? C1 GAL 201 A 1 HETATM 2 C C2 GAL . . . B 2 3.813 19.076 72.592 1 42.22 ? C2 GAL 201 A 1 HETATM 3 C C3 GAL . . . B 2 5.166 19.303 71.925 1 42.27 ? C3 GAL 201 A 1 HETATM 4 C C4 GAL . . . B 2 5.096 20.456 70.968 1 41.68 ? C4 GAL 201 A 1 HETATM 5 C C5 GAL . . . B 2 4.478 21.683 71.635 1 38.79 ? C5 GAL 201 A 1 HETATM 6 C C6 GAL . . . B 2 4.55 22.892 70.684 1 38.76 ? C6 GAL 201 A 1 HETATM 7 O O1 GAL . . . B 2 1.907 20.024 73.59 1 42.27 ? O1 GAL 201 A 1 HETATM 8 O O2 GAL . . . B 2 3.94 18.191 73.697 1 44.76 ? O2 GAL 201 A 1 HETATM 9 O O3 GAL . . . B 2 5.543 18.186 71.133 1 45.38 ? O3 GAL 201 A 1 HETATM 10 O O4 GAL . . . B 2 4.298 20 69.873 1 43.64 ? O4 GAL 201 A 1 HETATM 11 O O5 GAL . . . B 2 3.156 21.367 72.109 1 37.01 ? O5 GAL 201 A 1 HETATM 12 O O6 GAL . . . B 2 3.471 23.816 70.829 1 34.98 ? O6 GAL 201 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 66 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 501 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #