data_6L6A # _model_server_result.job_id WFeJh3x-vo8Biw2WivyXNg _model_server_result.datetime_utc '2024-11-20 08:51:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l6a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6L6A # _exptl.entry_id 6L6A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-mannopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6L6A _cell.length_a 48.83 _cell.length_b 48.83 _cell.length_c 260.94 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L6A _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 130.47 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BMA _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-mannopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-mannose;D-mannose;mannose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BMA sing 70 n n C1 O1 BMA sing 71 n n C1 O5 BMA sing 72 n n C1 H1 BMA sing 73 n n C2 C3 BMA sing 74 n n C2 O2 BMA sing 75 n n C2 H2 BMA sing 76 n n C3 C4 BMA sing 77 n n C3 O3 BMA sing 78 n n C3 H3 BMA sing 79 n n C4 C5 BMA sing 80 n n C4 O4 BMA sing 81 n n C4 H4 BMA sing 82 n n C5 C6 BMA sing 83 n n C5 O5 BMA sing 84 n n C5 H5 BMA sing 85 n n C6 O6 BMA sing 86 n n C6 H61 BMA sing 87 n n C6 H62 BMA sing 88 n n O1 HO1 BMA sing 89 n n O2 HO2 BMA sing 90 n n O3 HO3 BMA sing 91 n n O4 HO4 BMA sing 92 n n O6 HO6 BMA sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BMA DManpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BMA b-D-mannopyranose 'COMMON NAME' GMML 1 BMA b-D-Manp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BMA Man 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 6L6A _atom_sites.fract_transf_matrix[1][1] 0.020479 _atom_sites.fract_transf_matrix[1][2] 0.011824 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023647 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003832 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BMA A 1 201 201 BMA BMA . C 3 HOH A 1 301 65 HOH HOH . C 3 HOH A 2 302 2 HOH HOH . C 3 HOH A 3 303 43 HOH HOH . C 3 HOH A 4 304 80 HOH HOH . C 3 HOH A 5 305 58 HOH HOH . C 3 HOH A 6 306 81 HOH HOH . C 3 HOH A 7 307 82 HOH HOH . C 3 HOH A 8 308 39 HOH HOH . C 3 HOH A 9 309 17 HOH HOH . C 3 HOH A 10 310 19 HOH HOH . C 3 HOH A 11 311 34 HOH HOH . C 3 HOH A 12 312 18 HOH HOH . C 3 HOH A 13 313 41 HOH HOH . C 3 HOH A 14 314 31 HOH HOH . C 3 HOH A 15 315 60 HOH HOH . C 3 HOH A 16 316 59 HOH HOH . C 3 HOH A 17 317 46 HOH HOH . C 3 HOH A 18 318 3 HOH HOH . C 3 HOH A 19 319 11 HOH HOH . C 3 HOH A 20 320 13 HOH HOH . C 3 HOH A 21 321 30 HOH HOH . C 3 HOH A 22 322 6 HOH HOH . C 3 HOH A 23 323 33 HOH HOH . C 3 HOH A 24 324 56 HOH HOH . C 3 HOH A 25 325 21 HOH HOH . C 3 HOH A 26 326 79 HOH HOH . C 3 HOH A 27 327 26 HOH HOH . C 3 HOH A 28 328 42 HOH HOH . C 3 HOH A 29 329 28 HOH HOH . C 3 HOH A 30 330 40 HOH HOH . C 3 HOH A 31 331 55 HOH HOH . C 3 HOH A 32 332 45 HOH HOH . C 3 HOH A 33 333 70 HOH HOH . C 3 HOH A 34 334 20 HOH HOH . C 3 HOH A 35 335 35 HOH HOH . C 3 HOH A 36 336 71 HOH HOH . C 3 HOH A 37 337 38 HOH HOH . C 3 HOH A 38 338 48 HOH HOH . C 3 HOH A 39 339 83 HOH HOH . C 3 HOH A 40 340 53 HOH HOH . C 3 HOH A 41 341 7 HOH HOH . C 3 HOH A 42 342 69 HOH HOH . C 3 HOH A 43 343 9 HOH HOH . C 3 HOH A 44 344 24 HOH HOH . C 3 HOH A 45 345 36 HOH HOH . C 3 HOH A 46 346 64 HOH HOH . C 3 HOH A 47 347 29 HOH HOH . C 3 HOH A 48 348 5 HOH HOH . C 3 HOH A 49 349 32 HOH HOH . C 3 HOH A 50 350 72 HOH HOH . C 3 HOH A 51 351 12 HOH HOH . C 3 HOH A 52 352 84 HOH HOH . C 3 HOH A 53 353 22 HOH HOH . C 3 HOH A 54 354 25 HOH HOH . C 3 HOH A 55 355 10 HOH HOH . C 3 HOH A 56 356 54 HOH HOH . C 3 HOH A 57 357 4 HOH HOH . C 3 HOH A 58 358 14 HOH HOH . C 3 HOH A 59 359 44 HOH HOH . C 3 HOH A 60 360 15 HOH HOH . C 3 HOH A 61 361 47 HOH HOH . C 3 HOH A 62 362 73 HOH HOH . C 3 HOH A 63 363 16 HOH HOH . C 3 HOH A 64 364 75 HOH HOH . C 3 HOH A 65 365 67 HOH HOH . C 3 HOH A 66 366 57 HOH HOH . C 3 HOH A 67 367 1 HOH HOH . C 3 HOH A 68 368 77 HOH HOH . C 3 HOH A 69 369 74 HOH HOH . C 3 HOH A 70 370 68 HOH HOH . C 3 HOH A 71 371 76 HOH HOH . C 3 HOH A 72 372 8 HOH HOH . C 3 HOH A 73 373 52 HOH HOH . C 3 HOH A 74 374 51 HOH HOH . C 3 HOH A 75 375 63 HOH HOH . C 3 HOH A 76 376 37 HOH HOH . C 3 HOH A 77 377 66 HOH HOH . C 3 HOH A 78 378 50 HOH HOH . C 3 HOH A 79 379 78 HOH HOH . C 3 HOH A 80 380 62 HOH HOH . C 3 HOH A 81 381 23 HOH HOH . C 3 HOH A 82 382 49 HOH HOH . C 3 HOH A 83 383 61 HOH HOH . C 3 HOH A 84 384 27 HOH HOH . C 3 HOH A 85 385 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BMA . . . B 2 5.374 20.304 72.098 1 28.47 ? C1 BMA 201 A 1 HETATM 2 C C2 BMA . . . B 2 4.067 20.255 72.889 1 28.38 ? C2 BMA 201 A 1 HETATM 3 C C3 BMA . . . B 2 4.061 19.095 73.878 1 27.28 ? C3 BMA 201 A 1 HETATM 4 C C4 BMA . . . B 2 4.47 17.776 73.192 1 28.36 ? C4 BMA 201 A 1 HETATM 5 C C5 BMA . . . B 2 5.773 17.915 72.415 1 29.39 ? C5 BMA 201 A 1 HETATM 6 C C6 BMA . . . B 2 6.021 16.662 71.577 1 31.31 ? C6 BMA 201 A 1 HETATM 7 O O1 BMA . . . B 2 5.219 21.196 71.014 1 30 ? O1 BMA 201 A 1 HETATM 8 O O2 BMA . . . B 2 3.001 20.04 71.968 1 28.47 ? O2 BMA 201 A 1 HETATM 9 O O3 BMA . . . B 2 2.756 18.996 74.414 1 24.26 ? O3 BMA 201 A 1 HETATM 10 O O4 BMA . . . B 2 4.618 16.68 74.116 1 25.72 ? O4 BMA 201 A 1 HETATM 11 O O5 BMA . . . B 2 5.771 19.051 71.534 1 29.53 ? O5 BMA 201 A 1 HETATM 12 O O6 BMA . . . B 2 7.259 16.855 70.877 1 32.34 ? O6 BMA 201 A 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #