data_6L6B # _model_server_result.job_id bj1wL9pFfa9wGuta4V-CiA _model_server_result.datetime_utc '2024-11-20 08:27:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l6b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6L6B # _exptl.entry_id 6L6B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-L-fucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6L6B _cell.length_a 48.82 _cell.length_b 48.82 _cell.length_c 261.03 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L6B _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 130.515 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H12 O5' _chem_comp.formula_weight 164.156 _chem_comp.id FUL _chem_comp.mon_nstd_flag . _chem_comp.name beta-L-fucopyranose _chem_comp.type 'l-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-L-fucose;6-deoxy-beta-L-galactopyranose;L-fucose;fucose;6-DEOXY-BETA-L-GALACTOSE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FUL sing 83 n n C1 O5 FUL sing 84 n n C1 O1 FUL sing 85 n n C1 H1 FUL sing 86 n n C2 O2 FUL sing 87 n n C2 C3 FUL sing 88 n n C2 H2 FUL sing 89 n n O2 HO2 FUL sing 90 n n C3 O3 FUL sing 91 n n C3 C4 FUL sing 92 n n C3 H3 FUL sing 93 n n O3 HO3 FUL sing 94 n n C4 O4 FUL sing 95 n n C4 C5 FUL sing 96 n n C4 H4 FUL sing 97 n n O4 HO4 FUL sing 98 n n C5 C6 FUL sing 99 n n C5 O5 FUL sing 100 n n C5 H5 FUL sing 101 n n C6 H61 FUL sing 102 n n C6 H62 FUL sing 103 n n C6 H63 FUL sing 104 n n O1 HO1 FUL sing 105 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version FUL LFucpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 FUL b-L-fucopyranose 'COMMON NAME' GMML 1 FUL b-L-Fucp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 FUL Fuc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 6L6B _atom_sites.fract_transf_matrix[1][1] 0.020483 _atom_sites.fract_transf_matrix[1][2] 0.011826 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023652 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003831 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FUL A 1 201 201 FUL FUL . C 3 HOH A 1 301 54 HOH HOH . C 3 HOH A 2 302 52 HOH HOH . C 3 HOH A 3 303 44 HOH HOH . C 3 HOH A 4 304 63 HOH HOH . C 3 HOH A 5 305 70 HOH HOH . C 3 HOH A 6 306 21 HOH HOH . C 3 HOH A 7 307 1 HOH HOH . C 3 HOH A 8 308 32 HOH HOH . C 3 HOH A 9 309 53 HOH HOH . C 3 HOH A 10 310 28 HOH HOH . C 3 HOH A 11 311 48 HOH HOH . C 3 HOH A 12 312 16 HOH HOH . C 3 HOH A 13 313 20 HOH HOH . C 3 HOH A 14 314 29 HOH HOH . C 3 HOH A 15 315 33 HOH HOH . C 3 HOH A 16 316 5 HOH HOH . C 3 HOH A 17 317 2 HOH HOH . C 3 HOH A 18 318 36 HOH HOH . C 3 HOH A 19 319 61 HOH HOH . C 3 HOH A 20 320 64 HOH HOH . C 3 HOH A 21 321 8 HOH HOH . C 3 HOH A 22 322 22 HOH HOH . C 3 HOH A 23 323 51 HOH HOH . C 3 HOH A 24 324 11 HOH HOH . C 3 HOH A 25 325 10 HOH HOH . C 3 HOH A 26 326 62 HOH HOH . C 3 HOH A 27 327 26 HOH HOH . C 3 HOH A 28 328 42 HOH HOH . C 3 HOH A 29 329 34 HOH HOH . C 3 HOH A 30 330 18 HOH HOH . C 3 HOH A 31 331 23 HOH HOH . C 3 HOH A 32 332 6 HOH HOH . C 3 HOH A 33 333 67 HOH HOH . C 3 HOH A 34 334 4 HOH HOH . C 3 HOH A 35 335 12 HOH HOH . C 3 HOH A 36 336 13 HOH HOH . C 3 HOH A 37 337 56 HOH HOH . C 3 HOH A 38 338 74 HOH HOH . C 3 HOH A 39 339 39 HOH HOH . C 3 HOH A 40 340 37 HOH HOH . C 3 HOH A 41 341 49 HOH HOH . C 3 HOH A 42 342 68 HOH HOH . C 3 HOH A 43 343 3 HOH HOH . C 3 HOH A 44 344 17 HOH HOH . C 3 HOH A 45 345 73 HOH HOH . C 3 HOH A 46 346 25 HOH HOH . C 3 HOH A 47 347 24 HOH HOH . C 3 HOH A 48 348 71 HOH HOH . C 3 HOH A 49 349 9 HOH HOH . C 3 HOH A 50 350 14 HOH HOH . C 3 HOH A 51 351 15 HOH HOH . C 3 HOH A 52 352 27 HOH HOH . C 3 HOH A 53 353 35 HOH HOH . C 3 HOH A 54 354 7 HOH HOH . C 3 HOH A 55 355 45 HOH HOH . C 3 HOH A 56 356 41 HOH HOH . C 3 HOH A 57 357 19 HOH HOH . C 3 HOH A 58 358 30 HOH HOH . C 3 HOH A 59 359 59 HOH HOH . C 3 HOH A 60 360 50 HOH HOH . C 3 HOH A 61 361 47 HOH HOH . C 3 HOH A 62 362 31 HOH HOH . C 3 HOH A 63 363 72 HOH HOH . C 3 HOH A 64 364 38 HOH HOH . C 3 HOH A 65 365 43 HOH HOH . C 3 HOH A 66 366 57 HOH HOH . C 3 HOH A 67 367 40 HOH HOH . C 3 HOH A 68 368 46 HOH HOH . C 3 HOH A 69 369 69 HOH HOH . C 3 HOH A 70 370 65 HOH HOH . C 3 HOH A 71 371 55 HOH HOH . C 3 HOH A 72 372 66 HOH HOH . C 3 HOH A 73 373 60 HOH HOH . C 3 HOH A 74 374 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FUL . . . B 2 4.762 18.728 73.458 1 26.69 ? C1 FUL 201 A 1 HETATM 2 C C2 FUL . . . B 2 3.537 19.591 73.17 1 25.92 ? C2 FUL 201 A 1 HETATM 3 O O2 FUL . . . B 2 2.64 19.553 74.264 1 25.15 ? O2 FUL 201 A 1 HETATM 4 C C3 FUL . . . B 2 3.912 21.04 72.832 1 25.44 ? C3 FUL 201 A 1 HETATM 5 O O3 FUL . . . B 2 2.688 21.711 72.43 1 24.8 ? O3 FUL 201 A 1 HETATM 6 C C4 FUL . . . B 2 4.985 21.075 71.722 1 25.52 ? C4 FUL 201 A 1 HETATM 7 O O4 FUL . . . B 2 4.446 20.792 70.429 1 25.02 ? O4 FUL 201 A 1 HETATM 8 C C5 FUL . . . B 2 6.087 20.071 72.026 1 26.18 ? C5 FUL 201 A 1 HETATM 9 C C6 FUL . . . B 2 7.209 19.999 70.994 1 27.29 ? C6 FUL 201 A 1 HETATM 10 O O5 FUL . . . B 2 5.557 18.767 72.27 1 27 ? O5 FUL 201 A 1 HETATM 11 O O1 FUL . . . B 2 4.399 17.383 73.81 1 26.75 ? O1 FUL 201 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #