data_6L71 # _model_server_result.job_id QijX6phgfaouNsoDvOJ1Iw _model_server_result.datetime_utc '2024-11-24 00:15:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6l71 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6L71 # _exptl.entry_id 6L71 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.125 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.64 _cell.angle_gamma 90 _cell.entry_id 6L71 _cell.length_a 37.601 _cell.length_b 78.095 _cell.length_c 56.347 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L71 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 144 A CYS 195 1_555 A SG CYS 149 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 A SG CYS 149 A CYS 200 1_555 A SG CYS 170 A CYS 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf3 A SG CYS 149 A CYS 200 1_555 A SG CYS 173 A CYS 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? covale ? covale1 B NZ LYS 3 C LYS 9 1_555 D C11 YOY . C YOY 401 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.434 ? covale ? covale2 B NZ LYS 3 C LYS 9 1_555 E C13 YDD . C YDD 402 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.428 ? # _chem_comp.formula 'C6 H6 N2 O' _chem_comp.formula_weight 122.125 _chem_comp.id NCA _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 NCA doub 237 n y N1 C6 NCA sing 238 n y C2 C3 NCA sing 239 n y C2 H2 NCA sing 240 n n C3 C4 NCA doub 241 n y C3 C7 NCA sing 242 n n C4 C5 NCA sing 243 n y C4 H4 NCA sing 244 n n C5 C6 NCA doub 245 n y C5 H5 NCA sing 246 n n C6 H6 NCA sing 247 n n C7 O7 NCA doub 248 n n C7 N7 NCA sing 249 n n N7 HN71 NCA sing 250 n n N7 HN72 NCA sing 251 n n # _atom_sites.entry_id 6L71 _atom_sites.fract_transf_matrix[1][1] 0.026595 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003566 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012805 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017906 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NCA A 1 401 402 NCA NCA . D 4 YOY C 1 401 401 YOY YOY . E 5 YDD C 1 402 501 YDD YDD . F 6 HOH A 1 501 42 HOH HOH . F 6 HOH A 2 502 169 HOH HOH . F 6 HOH A 3 503 134 HOH HOH . F 6 HOH A 4 504 128 HOH HOH . F 6 HOH A 5 505 202 HOH HOH . F 6 HOH A 6 506 199 HOH HOH . F 6 HOH A 7 507 33 HOH HOH . F 6 HOH A 8 508 22 HOH HOH . F 6 HOH A 9 509 17 HOH HOH . F 6 HOH A 10 510 48 HOH HOH . F 6 HOH A 11 511 87 HOH HOH . F 6 HOH A 12 512 27 HOH HOH . F 6 HOH A 13 513 102 HOH HOH . F 6 HOH A 14 514 47 HOH HOH . F 6 HOH A 15 515 23 HOH HOH . F 6 HOH A 16 516 110 HOH HOH . F 6 HOH A 17 517 63 HOH HOH . F 6 HOH A 18 518 195 HOH HOH . F 6 HOH A 19 519 14 HOH HOH . F 6 HOH A 20 520 66 HOH HOH . F 6 HOH A 21 521 84 HOH HOH . F 6 HOH A 22 522 216 HOH HOH . F 6 HOH A 23 523 213 HOH HOH . F 6 HOH A 24 524 64 HOH HOH . F 6 HOH A 25 525 187 HOH HOH . F 6 HOH A 26 526 4 HOH HOH . F 6 HOH A 27 527 34 HOH HOH . F 6 HOH A 28 528 55 HOH HOH . F 6 HOH A 29 529 50 HOH HOH . F 6 HOH A 30 530 36 HOH HOH . F 6 HOH A 31 531 38 HOH HOH . F 6 HOH A 32 532 164 HOH HOH . F 6 HOH A 33 533 16 HOH HOH . F 6 HOH A 34 534 85 HOH HOH . F 6 HOH A 35 535 146 HOH HOH . F 6 HOH A 36 536 21 HOH HOH . F 6 HOH A 37 537 201 HOH HOH . F 6 HOH A 38 538 53 HOH HOH . F 6 HOH A 39 539 153 HOH HOH . F 6 HOH A 40 540 9 HOH HOH . F 6 HOH A 41 541 145 HOH HOH . F 6 HOH A 42 542 1 HOH HOH . F 6 HOH A 43 543 219 HOH HOH . F 6 HOH A 44 544 81 HOH HOH . F 6 HOH A 45 545 162 HOH HOH . F 6 HOH A 46 546 37 HOH HOH . F 6 HOH A 47 547 116 HOH HOH . F 6 HOH A 48 548 2 HOH HOH . F 6 HOH A 49 549 144 HOH HOH . F 6 HOH A 50 550 91 HOH HOH . F 6 HOH A 51 551 20 HOH HOH . F 6 HOH A 52 552 44 HOH HOH . F 6 HOH A 53 553 8 HOH HOH . F 6 HOH A 54 554 101 HOH HOH . F 6 HOH A 55 555 109 HOH HOH . F 6 HOH A 56 556 105 HOH HOH . F 6 HOH A 57 557 115 HOH HOH . F 6 HOH A 58 558 112 HOH HOH . F 6 HOH A 59 559 46 HOH HOH . F 6 HOH A 60 560 10 HOH HOH . F 6 HOH A 61 561 210 HOH HOH . F 6 HOH A 62 562 152 HOH HOH . F 6 HOH A 63 563 19 HOH HOH . F 6 HOH A 64 564 124 HOH HOH . F 6 HOH A 65 565 140 HOH HOH . F 6 HOH A 66 566 155 HOH HOH . F 6 HOH A 67 567 151 HOH HOH . F 6 HOH A 68 568 208 HOH HOH . F 6 HOH A 69 569 212 HOH HOH . F 6 HOH A 70 570 172 HOH HOH . F 6 HOH A 71 571 6 HOH HOH . F 6 HOH A 72 572 126 HOH HOH . F 6 HOH A 73 573 12 HOH HOH . F 6 HOH A 74 574 11 HOH HOH . F 6 HOH A 75 575 3 HOH HOH . F 6 HOH A 76 576 30 HOH HOH . F 6 HOH A 77 577 45 HOH HOH . F 6 HOH A 78 578 163 HOH HOH . F 6 HOH A 79 579 39 HOH HOH . F 6 HOH A 80 580 92 HOH HOH . F 6 HOH A 81 581 13 HOH HOH . F 6 HOH A 82 582 7 HOH HOH . F 6 HOH A 83 583 57 HOH HOH . F 6 HOH A 84 584 65 HOH HOH . F 6 HOH A 85 585 133 HOH HOH . F 6 HOH A 86 586 61 HOH HOH . F 6 HOH A 87 587 32 HOH HOH . F 6 HOH A 88 588 147 HOH HOH . F 6 HOH A 89 589 179 HOH HOH . F 6 HOH A 90 590 31 HOH HOH . F 6 HOH A 91 591 117 HOH HOH . F 6 HOH A 92 592 41 HOH HOH . F 6 HOH A 93 593 56 HOH HOH . F 6 HOH A 94 594 24 HOH HOH . F 6 HOH A 95 595 93 HOH HOH . F 6 HOH A 96 596 5 HOH HOH . F 6 HOH A 97 597 99 HOH HOH . F 6 HOH A 98 598 180 HOH HOH . F 6 HOH A 99 599 52 HOH HOH . F 6 HOH A 100 600 130 HOH HOH . F 6 HOH A 101 601 15 HOH HOH . F 6 HOH A 102 602 82 HOH HOH . F 6 HOH A 103 603 108 HOH HOH . F 6 HOH A 104 604 104 HOH HOH . F 6 HOH A 105 605 26 HOH HOH . F 6 HOH A 106 606 28 HOH HOH . F 6 HOH A 107 607 72 HOH HOH . F 6 HOH A 108 608 100 HOH HOH . F 6 HOH A 109 609 113 HOH HOH . F 6 HOH A 110 610 95 HOH HOH . F 6 HOH A 111 611 215 HOH HOH . F 6 HOH A 112 612 69 HOH HOH . F 6 HOH A 113 613 142 HOH HOH . F 6 HOH A 114 614 29 HOH HOH . F 6 HOH A 115 615 214 HOH HOH . F 6 HOH A 116 616 177 HOH HOH . F 6 HOH A 117 617 183 HOH HOH . F 6 HOH A 118 618 97 HOH HOH . F 6 HOH A 119 619 181 HOH HOH . F 6 HOH A 120 620 185 HOH HOH . F 6 HOH A 121 621 89 HOH HOH . F 6 HOH A 122 622 54 HOH HOH . F 6 HOH A 123 623 205 HOH HOH . F 6 HOH A 124 624 150 HOH HOH . F 6 HOH A 125 625 111 HOH HOH . F 6 HOH A 126 626 139 HOH HOH . F 6 HOH A 127 627 125 HOH HOH . F 6 HOH A 128 628 193 HOH HOH . F 6 HOH A 129 629 75 HOH HOH . F 6 HOH A 130 630 98 HOH HOH . F 6 HOH A 131 631 120 HOH HOH . F 6 HOH A 132 632 127 HOH HOH . F 6 HOH A 133 633 189 HOH HOH . F 6 HOH A 134 634 40 HOH HOH . F 6 HOH A 135 635 166 HOH HOH . F 6 HOH A 136 636 74 HOH HOH . F 6 HOH A 137 637 121 HOH HOH . F 6 HOH A 138 638 176 HOH HOH . F 6 HOH A 139 639 18 HOH HOH . F 6 HOH A 140 640 68 HOH HOH . F 6 HOH A 141 641 58 HOH HOH . F 6 HOH A 142 642 88 HOH HOH . F 6 HOH A 143 643 178 HOH HOH . F 6 HOH A 144 644 198 HOH HOH . F 6 HOH A 145 645 96 HOH HOH . F 6 HOH A 146 646 94 HOH HOH . F 6 HOH A 147 647 186 HOH HOH . F 6 HOH A 148 648 60 HOH HOH . F 6 HOH A 149 649 161 HOH HOH . F 6 HOH A 150 650 137 HOH HOH . F 6 HOH A 151 651 25 HOH HOH . F 6 HOH A 152 652 221 HOH HOH . F 6 HOH A 153 653 173 HOH HOH . F 6 HOH A 154 654 143 HOH HOH . F 6 HOH A 155 655 203 HOH HOH . F 6 HOH A 156 656 160 HOH HOH . F 6 HOH A 157 657 70 HOH HOH . F 6 HOH A 158 658 35 HOH HOH . F 6 HOH A 159 659 188 HOH HOH . F 6 HOH A 160 660 175 HOH HOH . F 6 HOH A 161 661 62 HOH HOH . F 6 HOH A 162 662 77 HOH HOH . F 6 HOH A 163 663 223 HOH HOH . F 6 HOH A 164 664 67 HOH HOH . F 6 HOH A 165 665 167 HOH HOH . F 6 HOH A 166 666 184 HOH HOH . F 6 HOH A 167 667 141 HOH HOH . F 6 HOH A 168 668 122 HOH HOH . F 6 HOH A 169 669 79 HOH HOH . F 6 HOH A 170 670 206 HOH HOH . F 6 HOH A 171 671 129 HOH HOH . F 6 HOH A 172 672 196 HOH HOH . F 6 HOH A 173 673 43 HOH HOH . F 6 HOH A 174 674 136 HOH HOH . F 6 HOH A 175 675 148 HOH HOH . F 6 HOH A 176 676 168 HOH HOH . F 6 HOH A 177 677 90 HOH HOH . F 6 HOH A 178 678 156 HOH HOH . F 6 HOH A 179 679 192 HOH HOH . F 6 HOH A 180 680 197 HOH HOH . F 6 HOH A 181 681 103 HOH HOH . F 6 HOH A 182 682 170 HOH HOH . F 6 HOH A 183 683 217 HOH HOH . F 6 HOH A 184 684 209 HOH HOH . F 6 HOH A 185 685 191 HOH HOH . F 6 HOH A 186 686 71 HOH HOH . F 6 HOH A 187 687 154 HOH HOH . F 6 HOH A 188 688 123 HOH HOH . F 6 HOH A 189 689 51 HOH HOH . F 6 HOH A 190 690 171 HOH HOH . F 6 HOH A 191 691 222 HOH HOH . F 6 HOH A 192 692 83 HOH HOH . F 6 HOH A 193 693 59 HOH HOH . F 6 HOH A 194 694 165 HOH HOH . F 6 HOH A 195 695 131 HOH HOH . F 6 HOH A 196 696 49 HOH HOH . F 6 HOH A 197 697 107 HOH HOH . F 6 HOH A 198 698 132 HOH HOH . F 6 HOH A 199 699 149 HOH HOH . F 6 HOH A 200 700 119 HOH HOH . F 6 HOH A 201 701 78 HOH HOH . F 6 HOH A 202 702 138 HOH HOH . F 6 HOH A 203 703 106 HOH HOH . F 6 HOH A 204 704 80 HOH HOH . F 6 HOH A 205 705 182 HOH HOH . F 6 HOH A 206 706 157 HOH HOH . F 6 HOH A 207 707 118 HOH HOH . F 6 HOH A 208 708 159 HOH HOH . F 6 HOH A 209 709 204 HOH HOH . F 6 HOH A 210 710 174 HOH HOH . F 6 HOH A 211 711 220 HOH HOH . F 6 HOH A 212 712 190 HOH HOH . F 6 HOH A 213 713 207 HOH HOH . F 6 HOH A 214 714 218 HOH HOH . G 6 HOH C 1 501 86 HOH HOH . G 6 HOH C 2 502 76 HOH HOH . G 6 HOH C 3 503 200 HOH HOH . G 6 HOH C 4 504 114 HOH HOH . G 6 HOH C 5 505 73 HOH HOH . G 6 HOH C 6 506 135 HOH HOH . G 6 HOH C 7 507 211 HOH HOH . G 6 HOH C 8 508 158 HOH HOH . G 6 HOH C 9 509 194 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 NCA . . . C 3 -14.848 16.34 -13.316 1 47.05 ? N1 NCA 401 A 1 HETATM 2 C C2 NCA . . . C 3 -14.007 17.293 -12.84 1 43.53 ? C2 NCA 401 A 1 HETATM 3 C C3 NCA . . . C 3 -14.532 18.47 -12.315 1 43.29 ? C3 NCA 401 A 1 HETATM 4 C C4 NCA . . . C 3 -15.878 18.674 -12.289 1 42.34 ? C4 NCA 401 A 1 HETATM 5 C C5 NCA . . . C 3 -16.709 17.715 -12.768 1 43.16 ? C5 NCA 401 A 1 HETATM 6 C C6 NCA . . . C 3 -16.187 16.534 -13.29 1 44.23 ? C6 NCA 401 A 1 HETATM 7 C C7 NCA . . . C 3 -13.6 19.551 -11.78 1 36.62 ? C7 NCA 401 A 1 HETATM 8 O O7 NCA . . . C 3 -12.549 19.691 -12.325 1 35.45 ? O7 NCA 401 A 1 HETATM 9 N N7 NCA . . . C 3 -14.01 20.393 -10.645 1 26.16 ? N7 NCA 401 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 9 #