data_6L96
#
_model_server_result.job_id            f9ygblPjxh-XRILTHzlGHw 
_model_server_result.datetime_utc      '2024-10-31 06:17:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6l96 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    6L96 
#
_exptl.entry_id    6L96 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              490.548 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6L96 
_cell.length_a            82.736 
_cell.length_b            82.736 
_cell.length_c            177.521 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6L96 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
_chem_comp.formula           'C28 H30 N2 O6' 
_chem_comp.formula_weight    490.548 
_chem_comp.id                P7F 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C36 O06 P7F sing 235 n n 
O06 C35 P7F sing 236 n n 
C35 C33 P7F doub 237 n y 
C35 C34 P7F sing 238 n y 
C33 C31 P7F sing 239 n y 
C34 C32 P7F doub 240 n y 
C31 C26 P7F doub 241 n y 
C32 C26 P7F sing 242 n y 
C26 O02 P7F sing 243 n n 
O02 C14 P7F sing 244 n n 
C14 C11 P7F sing 245 n n 
C11 C09 P7F sing 246 n n 
C09 N07 P7F sing 247 n n 
C29 C23 P7F sing 248 n n 
N08 C13 P7F doub 249 n y 
N08 C19 P7F sing 250 n y 
C21 C22 P7F doub 251 n y 
C21 C16 P7F sing 252 n y 
N07 C13 P7F sing 253 n n 
N07 C10 P7F sing 254 n n 
C22 C17 P7F sing 255 n y 
C16 C12 P7F doub 256 n y 
C25 C19 P7F doub 257 n y 
C25 C28 P7F sing 258 n y 
C13 O01 P7F sing 259 n y 
C19 C18 P7F sing 260 n y 
C17 O03 P7F sing 261 n n 
C17 C15 P7F doub 262 n y 
C23 C20 P7F sing 263 n n 
C12 C15 P7F sing 264 n y 
C12 C10 P7F sing 265 n n 
O03 C20 P7F sing 266 n n 
C20 C30 P7F sing 267 n n 
C28 C27 P7F doub 268 n y 
O01 C18 P7F sing 269 n y 
C18 C24 P7F doub 270 n y 
C30 O05 P7F doub 271 n n 
C30 O04 P7F sing 272 n n 
C27 C24 P7F sing 273 n y 
C09 H091 P7F sing 274 n n 
C09 H092 P7F sing 275 n n 
C10 H102 P7F sing 276 n n 
C10 H101 P7F sing 277 n n 
C11 H112 P7F sing 278 n n 
C11 H111 P7F sing 279 n n 
C14 H141 P7F sing 280 n n 
C14 H142 P7F sing 281 n n 
C15 H151 P7F sing 282 n n 
C16 H161 P7F sing 283 n n 
C20 H201 P7F sing 284 n n 
C21 H211 P7F sing 285 n n 
C22 H221 P7F sing 286 n n 
C23 H232 P7F sing 287 n n 
C23 H231 P7F sing 288 n n 
C24 H241 P7F sing 289 n n 
C25 H251 P7F sing 290 n n 
C27 H271 P7F sing 291 n n 
C28 H281 P7F sing 292 n n 
C29 H292 P7F sing 293 n n 
C29 H291 P7F sing 294 n n 
C29 H293 P7F sing 295 n n 
C31 H311 P7F sing 296 n n 
C32 H321 P7F sing 297 n n 
C33 H331 P7F sing 298 n n 
C34 H341 P7F sing 299 n n 
C36 H363 P7F sing 300 n n 
C36 H362 P7F sing 301 n n 
C36 H361 P7F sing 302 n n 
O04 H1 P7F sing 303 n n 
#
_atom_sites.entry_id                     6L96 
_atom_sites.fract_transf_matrix[1][1]    0.012087 
_atom_sites.fract_transf_matrix[1][2]    0.006978 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013956 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005633 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 P7F A 1 501 1 P7F 87K . 
E 3 P7F B 1 501 2 P7F 87K . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C09 P7F . . . E 3 1.585 22.144 16.794 1 103.06 ? C09 P7F 501 B 1 
HETATM 2 C C10 P7F . . . E 3 2.396 23.564 14.976 1 100.03 ? C10 P7F 501 B 1 
HETATM 3 C C11 P7F . . . E 3 2.541 21.108 17.281 1 117.46 ? C11 P7F 501 B 1 
HETATM 4 C C12 P7F . . . E 3 3.307 22.672 14.174 1 107.5 ? C12 P7F 501 B 1 
HETATM 5 C C13 P7F . . . E 3 2.788 24.221 17.317 1 75.7 ? C13 P7F 501 B 1 
HETATM 6 C C14 P7F . . . E 3 1.772 20.197 18.214 1 133.11 ? C14 P7F 501 B 1 
HETATM 7 C C15 P7F . . . E 3 2.81 22.051 13.032 1 98.16 ? C15 P7F 501 B 1 
HETATM 8 C C16 P7F . . . E 3 4.649 22.521 14.548 1 116.36 ? C16 P7F 501 B 1 
HETATM 9 C C17 P7F . . . E 3 3.664 21.259 12.276 1 99.09 ? C17 P7F 501 B 1 
HETATM 10 C C18 P7F . . . E 3 3.288 25.313 19.055 1 67.7 ? C18 P7F 501 B 1 
HETATM 11 C C19 P7F . . . E 3 3.367 26.253 17.96 1 67.67 ? C19 P7F 501 B 1 
HETATM 12 C C20 P7F . . . E 3 1.976 20.673 10.553 1 106.88 ? C20 P7F 501 B 1 
HETATM 13 C C21 P7F . . . E 3 5.502 21.724 13.785 1 109.99 ? C21 P7F 501 B 1 
HETATM 14 C C22 P7F . . . E 3 4.999 21.094 12.646 1 105 ? C22 P7F 501 B 1 
HETATM 15 C C23 P7F . . . E 3 1.982 19.594 9.471 1 111.65 ? C23 P7F 501 B 1 
HETATM 16 C C24 P7F . . . E 3 3.618 25.81 20.305 1 73.76 ? C24 P7F 501 B 1 
HETATM 17 C C25 P7F . . . E 3 3.734 27.582 18.17 1 72.08 ? C25 P7F 501 B 1 
HETATM 18 C C26 P7F . . . E 3 0.015 18.638 18.238 1 159.1 ? C26 P7F 501 B 1 
HETATM 19 C C27 P7F . . . E 3 3.988 27.16 20.499 1 75.77 ? C27 P7F 501 B 1 
HETATM 20 C C28 P7F . . . E 3 4.054 28.05 19.439 1 72.33 ? C28 P7F 501 B 1 
HETATM 21 C C29 P7F . . . E 3 0.596 19.026 9.27 1 114.56 ? C29 P7F 501 B 1 
HETATM 22 C C30 P7F . . . E 3 1.607 22.011 9.96 1 105.54 ? C30 P7F 501 B 1 
HETATM 23 C C31 P7F . . . E 3 0.55 17.344 18.167 1 156.58 ? C31 P7F 501 B 1 
HETATM 24 C C32 P7F . . . E 3 -1.113 18.9 19.025 1 162.59 ? C32 P7F 501 B 1 
HETATM 25 C C33 P7F . . . E 3 -0.059 16.3 18.864 1 154.19 ? C33 P7F 501 B 1 
HETATM 26 C C34 P7F . . . E 3 -1.722 17.852 19.724 1 158.91 ? C34 P7F 501 B 1 
HETATM 27 C C35 P7F . . . E 3 -1.194 16.558 19.643 1 152.75 ? C35 P7F 501 B 1 
HETATM 28 C C36 P7F . . . E 3 -2.371 14.46 19.585 1 133.83 ? C36 P7F 501 B 1 
HETATM 29 N N07 P7F . . . E 3 2.345 23.302 16.408 1 89.08 ? N07 P7F 501 B 1 
HETATM 30 N N08 P7F . . . E 3 3.017 25.491 16.901 1 76.91 ? N08 P7F 501 B 1 
HETATM 31 O O01 P7F . . . E 3 2.914 24.081 18.666 1 72.3 ? O01 P7F 501 B 1 
HETATM 32 O O02 P7F . . . E 3 0.628 19.655 17.563 1 139.38 ? O02 P7F 501 B 1 
HETATM 33 O O03 P7F . . . E 3 3.268 20.626 11.143 1 99.73 ? O03 P7F 501 B 1 
HETATM 34 O O04 P7F . . . E 3 2.196 22.506 9.019 1 102.17 ? O04 P7F 501 B 1 
HETATM 35 O O05 P7F . . . E 3 0.58 22.687 10.465 1 109.72 ? O05 P7F 501 B 1 
HETATM 36 O O06 P7F . . . E 3 -1.791 15.532 20.323 1 132.87 ? O06 P7F 501 B 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           36 
#