data_6LB4
#
_model_server_result.job_id            ime8EcLjVAmVVJ5fY35NEA 
_model_server_result.datetime_utc      '2024-10-26 02:36:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6lb4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    6LB4 
#
_exptl.entry_id    6LB4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6LB4 
_cell.length_a            66.298 
_cell.length_b            66.298 
_cell.length_c            109.669 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LB4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    'P 4nw 2abw' 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I 1 1 
A,B,C,D,E,F,G,H,I 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 136 n n 
C1 C2 EDO sing 137 n n 
C1 H11 EDO sing 138 n n 
C1 H12 EDO sing 139 n n 
O1 HO1 EDO sing 140 n n 
C2 O2 EDO sing 141 n n 
C2 H21 EDO sing 142 n n 
C2 H22 EDO sing 143 n n 
O2 HO2 EDO sing 144 n n 
#
_atom_sites.entry_id                     6LB4 
_atom_sites.fract_transf_matrix[1][1]    0.015083 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015083 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009118 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 E8L A 1 501 1 E8L DRG . 
D 4 EDO A 1 502 3 EDO EDO . 
E 4 EDO A 1 503 5 EDO EDO . 
F 4 EDO A 1 504 6 EDO EDO . 
G 4 EDO A 1 505 7 EDO EDO . 
H 5 HOH A 1 601 197 HOH HOH . 
H 5 HOH A 2 602 203 HOH HOH . 
H 5 HOH A 3 603 216 HOH HOH . 
H 5 HOH A 4 604 185 HOH HOH . 
H 5 HOH A 5 605 156 HOH HOH . 
H 5 HOH A 6 606 164 HOH HOH . 
H 5 HOH A 7 607 166 HOH HOH . 
H 5 HOH A 8 608 153 HOH HOH . 
H 5 HOH A 9 609 246 HOH HOH . 
H 5 HOH A 10 610 174 HOH HOH . 
H 5 HOH A 11 611 129 HOH HOH . 
H 5 HOH A 12 612 292 HOH HOH . 
H 5 HOH A 13 613 183 HOH HOH . 
H 5 HOH A 14 614 139 HOH HOH . 
H 5 HOH A 15 615 27 HOH HOH . 
H 5 HOH A 16 616 303 HOH HOH . 
H 5 HOH A 17 617 169 HOH HOH . 
H 5 HOH A 18 618 32 HOH HOH . 
H 5 HOH A 19 619 95 HOH HOH . 
H 5 HOH A 20 620 225 HOH HOH . 
H 5 HOH A 21 621 259 HOH HOH . 
H 5 HOH A 22 622 87 HOH HOH . 
H 5 HOH A 23 623 266 HOH HOH . 
H 5 HOH A 24 624 38 HOH HOH . 
H 5 HOH A 25 625 152 HOH HOH . 
H 5 HOH A 26 626 57 HOH HOH . 
H 5 HOH A 27 627 61 HOH HOH . 
H 5 HOH A 28 628 30 HOH HOH . 
H 5 HOH A 29 629 108 HOH HOH . 
H 5 HOH A 30 630 47 HOH HOH . 
H 5 HOH A 31 631 114 HOH HOH . 
H 5 HOH A 32 632 107 HOH HOH . 
H 5 HOH A 33 633 43 HOH HOH . 
H 5 HOH A 34 634 20 HOH HOH . 
H 5 HOH A 35 635 157 HOH HOH . 
H 5 HOH A 36 636 35 HOH HOH . 
H 5 HOH A 37 637 145 HOH HOH . 
H 5 HOH A 38 638 267 HOH HOH . 
H 5 HOH A 39 639 219 HOH HOH . 
H 5 HOH A 40 640 271 HOH HOH . 
H 5 HOH A 41 641 23 HOH HOH . 
H 5 HOH A 42 642 159 HOH HOH . 
H 5 HOH A 43 643 81 HOH HOH . 
H 5 HOH A 44 644 52 HOH HOH . 
H 5 HOH A 45 645 49 HOH HOH . 
H 5 HOH A 46 646 6 HOH HOH . 
H 5 HOH A 47 647 22 HOH HOH . 
H 5 HOH A 48 648 4 HOH HOH . 
H 5 HOH A 49 649 29 HOH HOH . 
H 5 HOH A 50 650 65 HOH HOH . 
H 5 HOH A 51 651 7 HOH HOH . 
H 5 HOH A 52 652 168 HOH HOH . 
H 5 HOH A 53 653 136 HOH HOH . 
H 5 HOH A 54 654 50 HOH HOH . 
H 5 HOH A 55 655 170 HOH HOH . 
H 5 HOH A 56 656 84 HOH HOH . 
H 5 HOH A 57 657 263 HOH HOH . 
H 5 HOH A 58 658 54 HOH HOH . 
H 5 HOH A 59 659 2 HOH HOH . 
H 5 HOH A 60 660 232 HOH HOH . 
H 5 HOH A 61 661 13 HOH HOH . 
H 5 HOH A 62 662 68 HOH HOH . 
H 5 HOH A 63 663 243 HOH HOH . 
H 5 HOH A 64 664 99 HOH HOH . 
H 5 HOH A 65 665 127 HOH HOH . 
H 5 HOH A 66 666 73 HOH HOH . 
H 5 HOH A 67 667 18 HOH HOH . 
H 5 HOH A 68 668 240 HOH HOH . 
H 5 HOH A 69 669 8 HOH HOH . 
H 5 HOH A 70 670 212 HOH HOH . 
H 5 HOH A 71 671 42 HOH HOH . 
H 5 HOH A 72 672 67 HOH HOH . 
H 5 HOH A 73 673 11 HOH HOH . 
H 5 HOH A 74 674 19 HOH HOH . 
H 5 HOH A 75 675 77 HOH HOH . 
H 5 HOH A 76 676 116 HOH HOH . 
H 5 HOH A 77 677 158 HOH HOH . 
H 5 HOH A 78 678 59 HOH HOH . 
H 5 HOH A 79 679 147 HOH HOH . 
H 5 HOH A 80 680 64 HOH HOH . 
H 5 HOH A 81 681 258 HOH HOH . 
H 5 HOH A 82 682 182 HOH HOH . 
H 5 HOH A 83 683 117 HOH HOH . 
H 5 HOH A 84 684 48 HOH HOH . 
H 5 HOH A 85 685 231 HOH HOH . 
H 5 HOH A 86 686 89 HOH HOH . 
H 5 HOH A 87 687 91 HOH HOH . 
H 5 HOH A 88 688 148 HOH HOH . 
H 5 HOH A 89 689 70 HOH HOH . 
H 5 HOH A 90 690 25 HOH HOH . 
H 5 HOH A 91 691 137 HOH HOH . 
H 5 HOH A 92 692 24 HOH HOH . 
H 5 HOH A 93 693 1 HOH HOH . 
H 5 HOH A 94 694 63 HOH HOH . 
H 5 HOH A 95 695 76 HOH HOH . 
H 5 HOH A 96 696 172 HOH HOH . 
H 5 HOH A 97 697 100 HOH HOH . 
H 5 HOH A 98 698 62 HOH HOH . 
H 5 HOH A 99 699 278 HOH HOH . 
H 5 HOH A 100 700 75 HOH HOH . 
H 5 HOH A 101 701 306 HOH HOH . 
H 5 HOH A 102 702 155 HOH HOH . 
H 5 HOH A 103 703 92 HOH HOH . 
H 5 HOH A 104 704 9 HOH HOH . 
H 5 HOH A 105 705 36 HOH HOH . 
H 5 HOH A 106 706 66 HOH HOH . 
H 5 HOH A 107 707 93 HOH HOH . 
H 5 HOH A 108 708 71 HOH HOH . 
H 5 HOH A 109 709 44 HOH HOH . 
H 5 HOH A 110 710 244 HOH HOH . 
H 5 HOH A 111 711 10 HOH HOH . 
H 5 HOH A 112 712 82 HOH HOH . 
H 5 HOH A 113 713 241 HOH HOH . 
H 5 HOH A 114 714 206 HOH HOH . 
H 5 HOH A 115 715 3 HOH HOH . 
H 5 HOH A 116 716 40 HOH HOH . 
H 5 HOH A 117 717 12 HOH HOH . 
H 5 HOH A 118 718 226 HOH HOH . 
H 5 HOH A 119 719 17 HOH HOH . 
H 5 HOH A 120 720 120 HOH HOH . 
H 5 HOH A 121 721 14 HOH HOH . 
H 5 HOH A 122 722 16 HOH HOH . 
H 5 HOH A 123 723 111 HOH HOH . 
H 5 HOH A 124 724 209 HOH HOH . 
H 5 HOH A 125 725 45 HOH HOH . 
H 5 HOH A 126 726 134 HOH HOH . 
H 5 HOH A 127 727 80 HOH HOH . 
H 5 HOH A 128 728 121 HOH HOH . 
H 5 HOH A 129 729 224 HOH HOH . 
H 5 HOH A 130 730 60 HOH HOH . 
H 5 HOH A 131 731 31 HOH HOH . 
H 5 HOH A 132 732 106 HOH HOH . 
H 5 HOH A 133 733 208 HOH HOH . 
H 5 HOH A 134 734 135 HOH HOH . 
H 5 HOH A 135 735 125 HOH HOH . 
H 5 HOH A 136 736 83 HOH HOH . 
H 5 HOH A 137 737 33 HOH HOH . 
H 5 HOH A 138 738 180 HOH HOH . 
H 5 HOH A 139 739 5 HOH HOH . 
H 5 HOH A 140 740 39 HOH HOH . 
H 5 HOH A 141 741 69 HOH HOH . 
H 5 HOH A 142 742 165 HOH HOH . 
H 5 HOH A 143 743 124 HOH HOH . 
H 5 HOH A 144 744 96 HOH HOH . 
H 5 HOH A 145 745 55 HOH HOH . 
H 5 HOH A 146 746 15 HOH HOH . 
H 5 HOH A 147 747 37 HOH HOH . 
H 5 HOH A 148 748 272 HOH HOH . 
H 5 HOH A 149 749 286 HOH HOH . 
H 5 HOH A 150 750 222 HOH HOH . 
H 5 HOH A 151 751 72 HOH HOH . 
H 5 HOH A 152 752 307 HOH HOH . 
H 5 HOH A 153 753 220 HOH HOH . 
H 5 HOH A 154 754 41 HOH HOH . 
H 5 HOH A 155 755 213 HOH HOH . 
H 5 HOH A 156 756 85 HOH HOH . 
H 5 HOH A 157 757 314 HOH HOH . 
H 5 HOH A 158 758 21 HOH HOH . 
H 5 HOH A 159 759 270 HOH HOH . 
H 5 HOH A 160 760 235 HOH HOH . 
H 5 HOH A 161 761 268 HOH HOH . 
H 5 HOH A 162 762 90 HOH HOH . 
H 5 HOH A 163 763 46 HOH HOH . 
H 5 HOH A 164 764 289 HOH HOH . 
H 5 HOH A 165 765 115 HOH HOH . 
H 5 HOH A 166 766 227 HOH HOH . 
H 5 HOH A 167 767 154 HOH HOH . 
H 5 HOH A 168 768 191 HOH HOH . 
H 5 HOH A 169 769 86 HOH HOH . 
H 5 HOH A 170 770 211 HOH HOH . 
H 5 HOH A 171 771 132 HOH HOH . 
H 5 HOH A 172 772 261 HOH HOH . 
H 5 HOH A 173 773 254 HOH HOH . 
H 5 HOH A 174 774 252 HOH HOH . 
H 5 HOH A 175 775 109 HOH HOH . 
H 5 HOH A 176 776 144 HOH HOH . 
H 5 HOH A 177 777 149 HOH HOH . 
H 5 HOH A 178 778 151 HOH HOH . 
H 5 HOH A 179 779 175 HOH HOH . 
H 5 HOH A 180 780 188 HOH HOH . 
H 5 HOH A 181 781 300 HOH HOH . 
H 5 HOH A 182 782 138 HOH HOH . 
H 5 HOH A 183 783 277 HOH HOH . 
H 5 HOH A 184 784 131 HOH HOH . 
H 5 HOH A 185 785 53 HOH HOH . 
H 5 HOH A 186 786 283 HOH HOH . 
H 5 HOH A 187 787 187 HOH HOH . 
H 5 HOH A 188 788 113 HOH HOH . 
H 5 HOH A 189 789 51 HOH HOH . 
H 5 HOH A 190 790 186 HOH HOH . 
H 5 HOH A 191 791 181 HOH HOH . 
H 5 HOH A 192 792 160 HOH HOH . 
H 5 HOH A 193 793 275 HOH HOH . 
H 5 HOH A 194 794 204 HOH HOH . 
H 5 HOH A 195 795 110 HOH HOH . 
H 5 HOH A 196 796 260 HOH HOH . 
H 5 HOH A 197 797 56 HOH HOH . 
H 5 HOH A 198 798 143 HOH HOH . 
H 5 HOH A 199 799 34 HOH HOH . 
H 5 HOH A 200 800 285 HOH HOH . 
H 5 HOH A 201 801 162 HOH HOH . 
H 5 HOH A 202 802 146 HOH HOH . 
H 5 HOH A 203 803 250 HOH HOH . 
H 5 HOH A 204 804 128 HOH HOH . 
H 5 HOH A 205 805 202 HOH HOH . 
H 5 HOH A 206 806 123 HOH HOH . 
H 5 HOH A 207 807 237 HOH HOH . 
H 5 HOH A 208 808 189 HOH HOH . 
H 5 HOH A 209 809 215 HOH HOH . 
H 5 HOH A 210 810 97 HOH HOH . 
H 5 HOH A 211 811 178 HOH HOH . 
H 5 HOH A 212 812 140 HOH HOH . 
H 5 HOH A 213 813 190 HOH HOH . 
H 5 HOH A 214 814 141 HOH HOH . 
H 5 HOH A 215 815 262 HOH HOH . 
H 5 HOH A 216 816 193 HOH HOH . 
H 5 HOH A 217 817 198 HOH HOH . 
H 5 HOH A 218 818 105 HOH HOH . 
H 5 HOH A 219 819 207 HOH HOH . 
H 5 HOH A 220 820 142 HOH HOH . 
H 5 HOH A 221 821 112 HOH HOH . 
H 5 HOH A 222 822 290 HOH HOH . 
H 5 HOH A 223 823 133 HOH HOH . 
H 5 HOH A 224 824 221 HOH HOH . 
H 5 HOH A 225 825 287 HOH HOH . 
H 5 HOH A 226 826 199 HOH HOH . 
H 5 HOH A 227 827 239 HOH HOH . 
H 5 HOH A 228 828 171 HOH HOH . 
H 5 HOH A 229 829 98 HOH HOH . 
H 5 HOH A 230 830 302 HOH HOH . 
H 5 HOH A 231 831 126 HOH HOH . 
H 5 HOH A 232 832 192 HOH HOH . 
H 5 HOH A 233 833 103 HOH HOH . 
H 5 HOH A 234 834 269 HOH HOH . 
H 5 HOH A 235 835 177 HOH HOH . 
H 5 HOH A 236 836 173 HOH HOH . 
H 5 HOH A 237 837 102 HOH HOH . 
H 5 HOH A 238 838 163 HOH HOH . 
H 5 HOH A 239 839 291 HOH HOH . 
H 5 HOH A 240 840 194 HOH HOH . 
H 5 HOH A 241 841 308 HOH HOH . 
H 5 HOH A 242 842 288 HOH HOH . 
H 5 HOH A 243 843 118 HOH HOH . 
H 5 HOH A 244 844 210 HOH HOH . 
H 5 HOH A 245 845 304 HOH HOH . 
H 5 HOH A 246 846 179 HOH HOH . 
H 5 HOH A 247 847 251 HOH HOH . 
H 5 HOH A 248 848 78 HOH HOH . 
H 5 HOH A 249 849 214 HOH HOH . 
H 5 HOH A 250 850 257 HOH HOH . 
H 5 HOH A 251 851 255 HOH HOH . 
H 5 HOH A 252 852 253 HOH HOH . 
H 5 HOH A 253 853 223 HOH HOH . 
H 5 HOH A 254 854 281 HOH HOH . 
H 5 HOH A 255 855 247 HOH HOH . 
H 5 HOH A 256 856 79 HOH HOH . 
H 5 HOH A 257 857 119 HOH HOH . 
H 5 HOH A 258 858 130 HOH HOH . 
H 5 HOH A 259 859 184 HOH HOH . 
H 5 HOH A 260 860 249 HOH HOH . 
H 5 HOH A 261 861 296 HOH HOH . 
H 5 HOH A 262 862 305 HOH HOH . 
H 5 HOH A 263 863 122 HOH HOH . 
H 5 HOH A 264 864 94 HOH HOH . 
H 5 HOH A 265 865 236 HOH HOH . 
H 5 HOH A 266 866 88 HOH HOH . 
H 5 HOH A 267 867 264 HOH HOH . 
H 5 HOH A 268 868 297 HOH HOH . 
H 5 HOH A 269 869 295 HOH HOH . 
H 5 HOH A 270 870 310 HOH HOH . 
H 5 HOH A 271 871 217 HOH HOH . 
H 5 HOH A 272 872 298 HOH HOH . 
H 5 HOH A 273 873 265 HOH HOH . 
H 5 HOH A 274 874 309 HOH HOH . 
H 5 HOH A 275 875 200 HOH HOH . 
H 5 HOH A 276 876 299 HOH HOH . 
H 5 HOH A 277 877 201 HOH HOH . 
H 5 HOH A 278 878 205 HOH HOH . 
H 5 HOH A 279 879 238 HOH HOH . 
H 5 HOH A 280 880 256 HOH HOH . 
I 5 HOH B 1 701 276 HOH HOH . 
I 5 HOH B 2 702 176 HOH HOH . 
I 5 HOH B 3 703 74 HOH HOH . 
I 5 HOH B 4 704 195 HOH HOH . 
I 5 HOH B 5 705 28 HOH HOH . 
I 5 HOH B 6 706 101 HOH HOH . 
I 5 HOH B 7 707 234 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 1.201 -12.784 -17.067 1 29.47 ? C1 EDO 502 A 1 
HETATM 2 O O1 EDO . . . D 4 1.79 -14.034 -16.653 1 26 ? O1 EDO 502 A 1 
HETATM 3 C C2 EDO . . . D 4 2.278 -11.779 -17.435 1 31.9 ? C2 EDO 502 A 1 
HETATM 4 O O2 EDO . . . D 4 3.418 -12.428 -18.02 1 40.59 ? O2 EDO 502 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#