data_6LBL
#
_model_server_result.job_id            mkdxb_Yqbp0Tcr_eEQvmdA 
_model_server_result.datetime_utc      '2024-11-24 15:56:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6lbl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    6LBL 
#
_exptl.entry_id    6LBL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6LBL 
_cell.length_a            35.92 
_cell.length_b            56.61 
_cell.length_c            100.62 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LBL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 77 A HIS 77 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc2 A ND1 HIS 79 A HIS 79 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc3 A OD2 ASP 81 A ASP 81 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
metalc ? metalc4 A O ILE 94 A ILE 94 1_555 D NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? 
metalc ? metalc5 A OG1 THR 115 A THR 115 1_555 D NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? 
metalc ? metalc6 A NE2 HIS 139 A HIS 139 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
metalc ? metalc7 A SG CYS 158 A CYS 158 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? 
metalc ? metalc8 A NE2 HIS 197 A HIS 197 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc9 B ZN ZN . A ZN 301 1_555 E N1 NO9 . A NO9 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc10 C ZN ZN . A ZN 302 1_555 E S NO9 . A NO9 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.973 ? 
metalc ? metalc11 C ZN ZN . A ZN 302 1_555 E N1 NO9 . A NO9 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc12 C ZN ZN . A ZN 302 1_555 E O4 NO9 . A NO9 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc13 D NA NA . A NA 303 1_555 F O HOH . A HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? 
metalc ? metalc14 D NA NA . A NA 303 1_555 F O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6LBL 
_atom_sites.fract_transf_matrix[1][1]    0.02784 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017665 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009938 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 301 301 ZN ZN . 
C 2 ZN A 1 302 302 ZN ZN . 
D 3 NA A 1 303 304 NA NA . 
E 4 NO9 A 1 304 701 NO9 NO9 . 
F 5 HOH A 1 401 401 HOH HOH . 
F 5 HOH A 2 402 402 HOH HOH . 
F 5 HOH A 3 403 407 HOH HOH . 
F 5 HOH A 4 404 403 HOH HOH . 
F 5 HOH A 5 405 405 HOH HOH . 
F 5 HOH A 6 406 404 HOH HOH . 
F 5 HOH A 7 407 408 HOH HOH . 
F 5 HOH A 8 408 406 HOH HOH . 
F 5 HOH A 9 409 409 HOH HOH . 
F 5 HOH A 10 410 411 HOH HOH . 
F 5 HOH A 11 411 414 HOH HOH . 
F 5 HOH A 12 412 410 HOH HOH . 
F 5 HOH A 13 413 417 HOH HOH . 
F 5 HOH A 14 414 421 HOH HOH . 
F 5 HOH A 15 415 419 HOH HOH . 
F 5 HOH A 16 416 416 HOH HOH . 
F 5 HOH A 17 417 412 HOH HOH . 
F 5 HOH A 18 418 422 HOH HOH . 
F 5 HOH A 19 419 413 HOH HOH . 
F 5 HOH A 20 420 418 HOH HOH . 
F 5 HOH A 21 421 420 HOH HOH . 
F 5 HOH A 22 422 428 HOH HOH . 
F 5 HOH A 23 423 435 HOH HOH . 
F 5 HOH A 24 424 425 HOH HOH . 
F 5 HOH A 25 425 430 HOH HOH . 
F 5 HOH A 26 426 423 HOH HOH . 
F 5 HOH A 27 427 432 HOH HOH . 
F 5 HOH A 28 428 440 HOH HOH . 
F 5 HOH A 29 429 446 HOH HOH . 
F 5 HOH A 30 430 424 HOH HOH . 
F 5 HOH A 31 431 434 HOH HOH . 
F 5 HOH A 32 432 431 HOH HOH . 
F 5 HOH A 33 433 437 HOH HOH . 
F 5 HOH A 34 434 426 HOH HOH . 
F 5 HOH A 35 435 427 HOH HOH . 
F 5 HOH A 36 436 439 HOH HOH . 
F 5 HOH A 37 437 429 HOH HOH . 
F 5 HOH A 38 438 448 HOH HOH . 
F 5 HOH A 39 439 436 HOH HOH . 
F 5 HOH A 40 440 442 HOH HOH . 
F 5 HOH A 41 441 447 HOH HOH . 
F 5 HOH A 42 442 441 HOH HOH . 
F 5 HOH A 43 443 445 HOH HOH . 
F 5 HOH A 44 444 443 HOH HOH . 
F 5 HOH A 45 445 438 HOH HOH . 
F 5 HOH A 46 446 461 HOH HOH . 
F 5 HOH A 47 447 450 HOH HOH . 
F 5 HOH A 48 448 457 HOH HOH . 
F 5 HOH A 49 449 415 HOH HOH . 
F 5 HOH A 50 450 452 HOH HOH . 
F 5 HOH A 51 451 433 HOH HOH . 
F 5 HOH A 52 452 485 HOH HOH . 
F 5 HOH A 53 453 464 HOH HOH . 
F 5 HOH A 54 454 460 HOH HOH . 
F 5 HOH A 55 455 480 HOH HOH . 
F 5 HOH A 56 456 453 HOH HOH . 
F 5 HOH A 57 457 459 HOH HOH . 
F 5 HOH A 58 458 451 HOH HOH . 
F 5 HOH A 59 459 486 HOH HOH . 
F 5 HOH A 60 460 469 HOH HOH . 
F 5 HOH A 61 461 456 HOH HOH . 
F 5 HOH A 62 462 471 HOH HOH . 
F 5 HOH A 63 463 467 HOH HOH . 
F 5 HOH A 64 464 475 HOH HOH . 
F 5 HOH A 65 465 449 HOH HOH . 
F 5 HOH A 66 466 484 HOH HOH . 
F 5 HOH A 67 467 455 HOH HOH . 
F 5 HOH A 68 468 478 HOH HOH . 
F 5 HOH A 69 469 479 HOH HOH . 
F 5 HOH A 70 470 458 HOH HOH . 
F 5 HOH A 71 471 462 HOH HOH . 
F 5 HOH A 72 472 466 HOH HOH . 
F 5 HOH A 73 473 477 HOH HOH . 
F 5 HOH A 74 474 454 HOH HOH . 
F 5 HOH A 75 475 465 HOH HOH . 
F 5 HOH A 76 476 483 HOH HOH . 
F 5 HOH A 77 477 472 HOH HOH . 
F 5 HOH A 78 478 491 HOH HOH . 
F 5 HOH A 79 479 463 HOH HOH . 
F 5 HOH A 80 480 444 HOH HOH . 
F 5 HOH A 81 481 490 HOH HOH . 
F 5 HOH A 82 482 470 HOH HOH . 
F 5 HOH A 83 483 481 HOH HOH . 
F 5 HOH A 84 484 468 HOH HOH . 
F 5 HOH A 85 485 510 HOH HOH . 
F 5 HOH A 86 486 476 HOH HOH . 
F 5 HOH A 87 487 488 HOH HOH . 
F 5 HOH A 88 488 482 HOH HOH . 
F 5 HOH A 89 489 487 HOH HOH . 
F 5 HOH A 90 490 494 HOH HOH . 
F 5 HOH A 91 491 474 HOH HOH . 
F 5 HOH A 92 492 473 HOH HOH . 
F 5 HOH A 93 493 493 HOH HOH . 
F 5 HOH A 94 494 489 HOH HOH . 
F 5 HOH A 95 495 492 HOH HOH . 
F 5 HOH A 96 496 499 HOH HOH . 
F 5 HOH A 97 497 496 HOH HOH . 
F 5 HOH A 98 498 508 HOH HOH . 
F 5 HOH A 99 499 495 HOH HOH . 
F 5 HOH A 100 500 503 HOH HOH . 
F 5 HOH A 101 501 498 HOH HOH . 
F 5 HOH A 102 502 501 HOH HOH . 
F 5 HOH A 103 503 500 HOH HOH . 
F 5 HOH A 104 504 497 HOH HOH . 
F 5 HOH A 105 505 509 HOH HOH . 
F 5 HOH A 106 506 517 HOH HOH . 
F 5 HOH A 107 507 528 HOH HOH . 
F 5 HOH A 108 508 504 HOH HOH . 
F 5 HOH A 109 509 502 HOH HOH . 
F 5 HOH A 110 510 527 HOH HOH . 
F 5 HOH A 111 511 521 HOH HOH . 
F 5 HOH A 112 512 507 HOH HOH . 
F 5 HOH A 113 513 522 HOH HOH . 
F 5 HOH A 114 514 516 HOH HOH . 
F 5 HOH A 115 515 525 HOH HOH . 
F 5 HOH A 116 516 511 HOH HOH . 
F 5 HOH A 117 517 520 HOH HOH . 
F 5 HOH A 118 518 514 HOH HOH . 
F 5 HOH A 119 519 515 HOH HOH . 
F 5 HOH A 120 520 513 HOH HOH . 
F 5 HOH A 121 521 506 HOH HOH . 
F 5 HOH A 122 522 505 HOH HOH . 
F 5 HOH A 123 523 518 HOH HOH . 
F 5 HOH A 124 524 512 HOH HOH . 
F 5 HOH A 125 525 530 HOH HOH . 
F 5 HOH A 126 526 519 HOH HOH . 
F 5 HOH A 127 527 524 HOH HOH . 
F 5 HOH A 128 528 536 HOH HOH . 
F 5 HOH A 129 529 526 HOH HOH . 
F 5 HOH A 130 530 532 HOH HOH . 
F 5 HOH A 131 531 549 HOH HOH . 
F 5 HOH A 132 532 529 HOH HOH . 
F 5 HOH A 133 533 533 HOH HOH . 
F 5 HOH A 134 534 537 HOH HOH . 
F 5 HOH A 135 535 543 HOH HOH . 
F 5 HOH A 136 536 534 HOH HOH . 
F 5 HOH A 137 537 531 HOH HOH . 
F 5 HOH A 138 538 546 HOH HOH . 
F 5 HOH A 139 539 539 HOH HOH . 
F 5 HOH A 140 540 535 HOH HOH . 
F 5 HOH A 141 541 538 HOH HOH . 
F 5 HOH A 142 542 540 HOH HOH . 
F 5 HOH A 143 543 523 HOH HOH . 
F 5 HOH A 144 544 561 HOH HOH . 
F 5 HOH A 145 545 544 HOH HOH . 
F 5 HOH A 146 546 559 HOH HOH . 
F 5 HOH A 147 547 553 HOH HOH . 
F 5 HOH A 148 548 547 HOH HOH . 
F 5 HOH A 149 549 552 HOH HOH . 
F 5 HOH A 150 550 556 HOH HOH . 
F 5 HOH A 151 551 541 HOH HOH . 
F 5 HOH A 152 552 560 HOH HOH . 
F 5 HOH A 153 553 566 HOH HOH . 
F 5 HOH A 154 554 555 HOH HOH . 
F 5 HOH A 155 555 562 HOH HOH . 
F 5 HOH A 156 556 550 HOH HOH . 
F 5 HOH A 157 557 554 HOH HOH . 
F 5 HOH A 158 558 545 HOH HOH . 
F 5 HOH A 159 559 558 HOH HOH . 
F 5 HOH A 160 560 567 HOH HOH . 
F 5 HOH A 161 561 551 HOH HOH . 
F 5 HOH A 162 562 569 HOH HOH . 
F 5 HOH A 163 563 542 HOH HOH . 
F 5 HOH A 164 564 570 HOH HOH . 
F 5 HOH A 165 565 568 HOH HOH . 
F 5 HOH A 166 566 548 HOH HOH . 
F 5 HOH A 167 567 557 HOH HOH . 
F 5 HOH A 168 568 571 HOH HOH . 
F 5 HOH A 169 569 564 HOH HOH . 
F 5 HOH A 170 570 565 HOH HOH . 
F 5 HOH A 171 571 563 HOH HOH . 
F 5 HOH A 172 572 573 HOH HOH . 
F 5 HOH A 173 573 574 HOH HOH . 
F 5 HOH A 174 574 572 HOH HOH . 
F 5 HOH A 175 575 577 HOH HOH . 
F 5 HOH A 176 576 575 HOH HOH . 
F 5 HOH A 177 577 578 HOH HOH . 
F 5 HOH A 178 578 580 HOH HOH . 
F 5 HOH A 179 579 581 HOH HOH . 
F 5 HOH A 180 580 576 HOH HOH . 
F 5 HOH A 181 581 582 HOH HOH . 
F 5 HOH A 182 582 579 HOH HOH . 
F 5 HOH A 183 583 584 HOH HOH . 
F 5 HOH A 184 584 585 HOH HOH . 
F 5 HOH A 185 585 583 HOH HOH . 
F 5 HOH A 186 586 586 HOH HOH . 
F 5 HOH A 187 587 587 HOH HOH . 
F 5 HOH A 188 588 588 HOH HOH . 
F 5 HOH A 189 589 591 HOH HOH . 
F 5 HOH A 190 590 590 HOH HOH . 
F 5 HOH A 191 591 589 HOH HOH . 
F 5 HOH A 192 592 592 HOH HOH . 
F 5 HOH A 193 593 595 HOH HOH . 
F 5 HOH A 194 594 594 HOH HOH . 
F 5 HOH A 195 595 597 HOH HOH . 
F 5 HOH A 196 596 593 HOH HOH . 
F 5 HOH A 197 597 598 HOH HOH . 
F 5 HOH A 198 598 600 HOH HOH . 
F 5 HOH A 199 599 599 HOH HOH . 
F 5 HOH A 200 600 601 HOH HOH . 
F 5 HOH A 201 601 606 HOH HOH . 
F 5 HOH A 202 602 602 HOH HOH . 
F 5 HOH A 203 603 603 HOH HOH . 
F 5 HOH A 204 604 604 HOH HOH . 
F 5 HOH A 205 605 605 HOH HOH . 
F 5 HOH A 206 606 607 HOH HOH . 
F 5 HOH A 207 607 608 HOH HOH . 
F 5 HOH A 208 608 610 HOH HOH . 
F 5 HOH A 209 609 609 HOH HOH . 
F 5 HOH A 210 610 613 HOH HOH . 
F 5 HOH A 211 611 612 HOH HOH . 
F 5 HOH A 212 612 611 HOH HOH . 
F 5 HOH A 213 613 614 HOH HOH . 
F 5 HOH A 214 614 616 HOH HOH . 
F 5 HOH A 215 615 615 HOH HOH . 
F 5 HOH A 216 616 617 HOH HOH . 
F 5 HOH A 217 617 618 HOH HOH . 
F 5 HOH A 218 618 619 HOH HOH . 
F 5 HOH A 219 619 621 HOH HOH . 
F 5 HOH A 220 621 623 HOH HOH . 
F 5 HOH A 221 622 624 HOH HOH . 
F 5 HOH A 222 623 625 HOH HOH . 
F 5 HOH A 223 624 626 HOH HOH . 
F 5 HOH A 224 625 627 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -16.718 
_atom_site.Cartn_y               11.611 
_atom_site.Cartn_z               -3.521 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        38.21 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           303 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          19 
_model_server_stats.element_count           1 
#