data_6LBX
#
_model_server_result.job_id            p5hN-WqFM0G7FSPtNEsccQ 
_model_server_result.datetime_utc      '2025-02-05 15:58:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6lbx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":701}' 
#
_entry.id    6LBX 
#
_exptl.entry_id    6LBX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6LBX 
_cell.length_a            44.659 
_cell.length_b            80.071 
_cell.length_c            108.406 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LBX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 220 A CYS 220 1_555 A SG CYS 253 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? 
disulf ? disulf2 A SG CYS 222 A CYS 222 1_555 A SG CYS 265 A CYS 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf3 B SG CYS 2 B CYS 531 1_555 B SG CYS 11 B CYS 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf4 B SG CYS 15 B CYS 544 1_555 B SG CYS 31 B CYS 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf5 B SG CYS 34 B CYS 563 1_555 B SG CYS 47 B CYS 576 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf6 B SG CYS 38 B CYS 567 1_555 B SG CYS 55 B CYS 584 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? 
disulf ? disulf7 B SG CYS 58 B CYS 587 1_555 B SG CYS 67 B CYS 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
covale ? covale1 B ND2 ASN 42 B ASN 571 1_555 C C1 NAG . B NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     6LBX 
_atom_sites.fract_transf_matrix[1][1]    0.022392 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012489 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009225 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NAG B 1 701 701 NAG NAG . 
D 4 HOH A 1 301 95 HOH HOH . 
D 4 HOH A 2 302 99 HOH HOH . 
D 4 HOH A 3 303 128 HOH HOH . 
D 4 HOH A 4 304 22 HOH HOH . 
D 4 HOH A 5 305 20 HOH HOH . 
D 4 HOH A 6 306 90 HOH HOH . 
D 4 HOH A 7 307 39 HOH HOH . 
D 4 HOH A 8 308 86 HOH HOH . 
D 4 HOH A 9 309 5 HOH HOH . 
D 4 HOH A 10 310 21 HOH HOH . 
D 4 HOH A 11 311 12 HOH HOH . 
D 4 HOH A 12 312 116 HOH HOH . 
D 4 HOH A 13 313 3 HOH HOH . 
D 4 HOH A 14 314 17 HOH HOH . 
D 4 HOH A 15 315 127 HOH HOH . 
D 4 HOH A 16 316 14 HOH HOH . 
D 4 HOH A 17 317 103 HOH HOH . 
D 4 HOH A 18 318 7 HOH HOH . 
D 4 HOH A 19 319 143 HOH HOH . 
D 4 HOH A 20 320 80 HOH HOH . 
D 4 HOH A 21 321 57 HOH HOH . 
D 4 HOH A 22 322 124 HOH HOH . 
D 4 HOH A 23 323 41 HOH HOH . 
D 4 HOH A 24 324 85 HOH HOH . 
D 4 HOH A 25 325 32 HOH HOH . 
D 4 HOH A 26 326 18 HOH HOH . 
D 4 HOH A 27 327 42 HOH HOH . 
D 4 HOH A 28 328 98 HOH HOH . 
D 4 HOH A 29 329 49 HOH HOH . 
D 4 HOH A 30 330 108 HOH HOH . 
D 4 HOH A 31 331 111 HOH HOH . 
D 4 HOH A 32 332 104 HOH HOH . 
D 4 HOH A 33 333 43 HOH HOH . 
D 4 HOH A 34 334 25 HOH HOH . 
D 4 HOH A 35 335 148 HOH HOH . 
D 4 HOH A 36 336 37 HOH HOH . 
D 4 HOH A 37 337 6 HOH HOH . 
D 4 HOH A 38 338 15 HOH HOH . 
D 4 HOH A 39 339 82 HOH HOH . 
D 4 HOH A 40 340 93 HOH HOH . 
D 4 HOH A 41 341 28 HOH HOH . 
D 4 HOH A 42 342 26 HOH HOH . 
D 4 HOH A 43 343 123 HOH HOH . 
D 4 HOH A 44 344 2 HOH HOH . 
D 4 HOH A 45 345 126 HOH HOH . 
D 4 HOH A 46 346 31 HOH HOH . 
D 4 HOH A 47 347 9 HOH HOH . 
D 4 HOH A 48 348 134 HOH HOH . 
D 4 HOH A 49 349 23 HOH HOH . 
D 4 HOH A 50 350 100 HOH HOH . 
D 4 HOH A 51 351 70 HOH HOH . 
D 4 HOH A 52 352 34 HOH HOH . 
D 4 HOH A 53 353 58 HOH HOH . 
D 4 HOH A 54 354 10 HOH HOH . 
D 4 HOH A 55 355 83 HOH HOH . 
D 4 HOH A 56 356 63 HOH HOH . 
D 4 HOH A 57 357 129 HOH HOH . 
D 4 HOH A 58 358 118 HOH HOH . 
D 4 HOH A 59 359 19 HOH HOH . 
D 4 HOH A 60 360 13 HOH HOH . 
D 4 HOH A 61 361 77 HOH HOH . 
D 4 HOH A 62 362 45 HOH HOH . 
D 4 HOH A 63 363 40 HOH HOH . 
D 4 HOH A 64 364 88 HOH HOH . 
D 4 HOH A 65 365 97 HOH HOH . 
D 4 HOH A 66 366 110 HOH HOH . 
D 4 HOH A 67 367 33 HOH HOH . 
D 4 HOH A 68 368 60 HOH HOH . 
D 4 HOH A 69 369 73 HOH HOH . 
D 4 HOH A 70 370 55 HOH HOH . 
D 4 HOH A 71 371 64 HOH HOH . 
D 4 HOH A 72 372 44 HOH HOH . 
D 4 HOH A 73 373 96 HOH HOH . 
D 4 HOH A 74 374 46 HOH HOH . 
D 4 HOH A 75 375 79 HOH HOH . 
D 4 HOH A 76 376 75 HOH HOH . 
D 4 HOH A 77 377 53 HOH HOH . 
D 4 HOH A 78 378 50 HOH HOH . 
D 4 HOH A 79 379 105 HOH HOH . 
D 4 HOH A 80 380 65 HOH HOH . 
D 4 HOH A 81 381 101 HOH HOH . 
D 4 HOH A 82 382 131 HOH HOH . 
D 4 HOH A 83 383 72 HOH HOH . 
D 4 HOH A 84 384 16 HOH HOH . 
D 4 HOH A 85 385 35 HOH HOH . 
D 4 HOH A 86 386 52 HOH HOH . 
D 4 HOH A 87 387 62 HOH HOH . 
D 4 HOH A 88 388 119 HOH HOH . 
D 4 HOH A 89 389 38 HOH HOH . 
D 4 HOH A 90 390 142 HOH HOH . 
D 4 HOH A 91 391 27 HOH HOH . 
D 4 HOH A 92 392 102 HOH HOH . 
D 4 HOH A 93 393 147 HOH HOH . 
D 4 HOH A 94 394 94 HOH HOH . 
D 4 HOH A 95 395 113 HOH HOH . 
D 4 HOH A 96 396 66 HOH HOH . 
D 4 HOH A 97 397 76 HOH HOH . 
D 4 HOH A 98 398 87 HOH HOH . 
D 4 HOH A 99 399 136 HOH HOH . 
D 4 HOH A 100 400 51 HOH HOH . 
D 4 HOH A 101 401 133 HOH HOH . 
D 4 HOH A 102 402 125 HOH HOH . 
D 4 HOH A 103 403 120 HOH HOH . 
D 4 HOH A 104 404 106 HOH HOH . 
D 4 HOH A 105 405 30 HOH HOH . 
D 4 HOH A 106 406 74 HOH HOH . 
D 4 HOH A 107 407 146 HOH HOH . 
D 4 HOH A 108 408 139 HOH HOH . 
D 4 HOH A 109 409 54 HOH HOH . 
D 4 HOH A 110 410 78 HOH HOH . 
D 4 HOH A 111 411 144 HOH HOH . 
D 4 HOH A 112 412 138 HOH HOH . 
D 4 HOH A 113 413 132 HOH HOH . 
D 4 HOH A 114 414 92 HOH HOH . 
D 4 HOH A 115 415 115 HOH HOH . 
D 4 HOH A 116 416 117 HOH HOH . 
D 4 HOH A 117 417 107 HOH HOH . 
E 4 HOH B 1 801 36 HOH HOH . 
E 4 HOH B 2 802 1 HOH HOH . 
E 4 HOH B 3 803 4 HOH HOH . 
E 4 HOH B 4 804 67 HOH HOH . 
E 4 HOH B 5 805 59 HOH HOH . 
E 4 HOH B 6 806 47 HOH HOH . 
E 4 HOH B 7 807 114 HOH HOH . 
E 4 HOH B 8 808 89 HOH HOH . 
E 4 HOH B 9 809 11 HOH HOH . 
E 4 HOH B 10 810 112 HOH HOH . 
E 4 HOH B 11 811 69 HOH HOH . 
E 4 HOH B 12 812 8 HOH HOH . 
E 4 HOH B 13 813 68 HOH HOH . 
E 4 HOH B 14 814 81 HOH HOH . 
E 4 HOH B 15 815 48 HOH HOH . 
E 4 HOH B 16 816 29 HOH HOH . 
E 4 HOH B 17 817 56 HOH HOH . 
E 4 HOH B 18 818 24 HOH HOH . 
E 4 HOH B 19 819 91 HOH HOH . 
E 4 HOH B 20 820 84 HOH HOH . 
E 4 HOH B 21 821 71 HOH HOH . 
E 4 HOH B 22 822 61 HOH HOH . 
E 4 HOH B 23 823 141 HOH HOH . 
E 4 HOH B 24 824 121 HOH HOH . 
E 4 HOH B 25 825 135 HOH HOH . 
E 4 HOH B 26 826 137 HOH HOH . 
E 4 HOH B 27 827 140 HOH HOH . 
E 4 HOH B 28 828 109 HOH HOH . 
E 4 HOH B 29 829 130 HOH HOH . 
E 4 HOH B 30 830 145 HOH HOH . 
E 4 HOH B 31 831 122 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . C 3 27.448 4.641 0.275 1 62.92 ? C1 NAG 701 B 1 
HETATM 2 C C2 NAG . . . C 3 26.254 5.508 0.743 1 65.36 ? C2 NAG 701 B 1 
HETATM 3 C C3 NAG . . . C 3 26.459 6.99 0.359 1 63.02 ? C3 NAG 701 B 1 
HETATM 4 C C4 NAG . . . C 3 27.912 7.461 0.594 1 65.62 ? C4 NAG 701 B 1 
HETATM 5 C C5 NAG . . . C 3 28.846 6.476 -0.107 1 64.59 ? C5 NAG 701 B 1 
HETATM 6 C C6 NAG . . . C 3 30.313 6.89 -0.124 1 60.84 ? C6 NAG 701 B 1 
HETATM 7 C C7 NAG . . . C 3 24.155 4.363 1.216 1 66.61 ? C7 NAG 701 B 1 
HETATM 8 C C8 NAG . . . C 3 22.798 4.156 0.605 1 56.69 ? C8 NAG 701 B 1 
HETATM 9 N N2 NAG . . . C 3 25.212 4.418 0.428 1 69.17 ? N2 NAG 701 B 1 
HETATM 10 O O3 NAG . . . C 3 25.592 7.765 1.215 1 56.61 ? O3 NAG 701 B 1 
HETATM 11 O O4 NAG . . . C 3 28.073 8.8 0.091 1 70.81 ? O4 NAG 701 B 1 
HETATM 12 O O5 NAG . . . C 3 28.742 5.18 0.505 1 61.46 ? O5 NAG 701 B 1 
HETATM 13 O O6 NAG . . . C 3 30.935 6.496 1.102 1 62.68 ? O6 NAG 701 B 1 
HETATM 14 O O7 NAG . . . C 3 24.307 4.58 2.403 1 64.48 ? O7 NAG 701 B 1 
HETATM 15 H H1 NAG . . . C 3 27.333 4.544 -0.814 1 75.53 ? H1 NAG 701 B 1 
HETATM 16 H H2 NAG . . . C 3 25.95 5.899 1.724 1 78.45 ? H2 NAG 701 B 1 
HETATM 17 H H3 NAG . . . C 3 26.233 7.12 -0.708 1 75.64 ? H3 NAG 701 B 1 
HETATM 18 H H4 NAG . . . C 3 28.156 7.489 1.665 1 78.77 ? H4 NAG 701 B 1 
HETATM 19 H H5 NAG . . . C 3 28.51 6.452 -1.154 1 77.54 ? H5 NAG 701 B 1 
HETATM 20 H H61 NAG . . . C 3 30.822 6.417 -0.967 1 73.03 ? H61 NAG 701 B 1 
HETATM 21 H H62 NAG . . . C 3 30.391 7.972 -0.249 1 73.03 ? H62 NAG 701 B 1 
HETATM 22 H H81 NAG . . . C 3 22.706 3.152 0.283 1 68.05 ? H81 NAG 701 B 1 
HETATM 23 H H82 NAG . . . C 3 22.051 4.367 1.325 1 68.05 ? H82 NAG 701 B 1 
HETATM 24 H H83 NAG . . . C 3 22.682 4.805 -0.224 1 68.05 ? H83 NAG 701 B 1 
HETATM 25 H HN2 NAG . . . C 3 25.343 3.782 -0.346 1 83.03 ? HN2 NAG 701 B 1 
HETATM 26 H HO3 NAG . . . C 3 25.666 8.702 0.986 1 67.95 ? HO3 NAG 701 B 1 
HETATM 27 H HO4 NAG . . . C 3 28.982 9.094 0.244 1 84.99 ? HO4 NAG 701 B 1 
HETATM 28 H HO6 NAG . . . C 3 31.876 6.718 1.071 1 75.24 ? HO6 NAG 701 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           28 
#