data_6LEG
#
_model_server_result.job_id            wJbFlx80E31xtJHsqCbDvA 
_model_server_result.datetime_utc      '2024-11-23 08:36:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6leg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":701}' 
#
_entry.id    6LEG 
#
_exptl.entry_id    6LEG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              161.156 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.79 
_cell.angle_gamma         90 
_cell.entry_id            6LEG 
_cell.length_a            207.527 
_cell.length_b            75.926 
_cell.length_c            168.281 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LEG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C6 H11 N O4' 
_chem_comp.formula_weight    161.156 
_chem_comp.id                SJ5 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O61 C6 SJ5 doub 290 n n 
O4 C4 SJ5 sing 291 n n 
O62 C6 SJ5 sing 292 n n 
C6 C5 SJ5 sing 293 n n 
C4 C5 SJ5 sing 294 n n 
C4 C3 SJ5 sing 295 n n 
O3 C3 SJ5 sing 296 n n 
C5 C7 SJ5 sing 297 n n 
C7 N SJ5 sing 298 n n 
C3 C2 SJ5 sing 299 n n 
C2 N SJ5 sing 300 n n 
C2 H1 SJ5 sing 301 n n 
C2 H2 SJ5 sing 302 n n 
C3 H3 SJ5 sing 303 n n 
O3 H4 SJ5 sing 304 n n 
N H5 SJ5 sing 305 n n 
C7 H7 SJ5 sing 306 n n 
C7 H8 SJ5 sing 307 n n 
C5 H9 SJ5 sing 308 n n 
O62 H10 SJ5 sing 309 n n 
C4 H11 SJ5 sing 310 n n 
O4 H12 SJ5 sing 311 n n 
#
_atom_sites.entry_id                     6LEG 
_atom_sites.fract_transf_matrix[1][1]    0.004819 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000574 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013171 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005984 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SJ5 A 1 701 2 SJ5 SJ5 . 
F 2 SJ5 B 1 701 3 SJ5 SJ5 . 
G 2 SJ5 C 1 701 4 SJ5 SJ5 . 
H 2 SJ5 D 1 701 1 SJ5 SJ5 . 
I 3 HOH A 1 801 87 HOH HOH . 
I 3 HOH A 2 802 136 HOH HOH . 
I 3 HOH A 3 803 96 HOH HOH . 
I 3 HOH A 4 804 122 HOH HOH . 
I 3 HOH A 5 805 100 HOH HOH . 
I 3 HOH A 6 806 117 HOH HOH . 
I 3 HOH A 7 807 222 HOH HOH . 
I 3 HOH A 8 808 71 HOH HOH . 
I 3 HOH A 9 809 116 HOH HOH . 
I 3 HOH A 10 810 215 HOH HOH . 
I 3 HOH A 11 811 2 HOH HOH . 
I 3 HOH A 12 812 168 HOH HOH . 
I 3 HOH A 13 813 50 HOH HOH . 
I 3 HOH A 14 814 5 HOH HOH . 
I 3 HOH A 15 815 1 HOH HOH . 
I 3 HOH A 16 816 108 HOH HOH . 
I 3 HOH A 17 817 110 HOH HOH . 
I 3 HOH A 18 818 39 HOH HOH . 
I 3 HOH A 19 819 161 HOH HOH . 
I 3 HOH A 20 820 195 HOH HOH . 
I 3 HOH A 21 821 201 HOH HOH . 
I 3 HOH A 22 822 74 HOH HOH . 
I 3 HOH A 23 823 55 HOH HOH . 
I 3 HOH A 24 824 137 HOH HOH . 
I 3 HOH A 25 825 51 HOH HOH . 
I 3 HOH A 26 826 24 HOH HOH . 
I 3 HOH A 27 827 59 HOH HOH . 
I 3 HOH A 28 828 16 HOH HOH . 
I 3 HOH A 29 829 45 HOH HOH . 
I 3 HOH A 30 830 18 HOH HOH . 
I 3 HOH A 31 831 56 HOH HOH . 
I 3 HOH A 32 832 53 HOH HOH . 
I 3 HOH A 33 833 105 HOH HOH . 
I 3 HOH A 34 834 115 HOH HOH . 
I 3 HOH A 35 835 23 HOH HOH . 
I 3 HOH A 36 836 85 HOH HOH . 
I 3 HOH A 37 837 76 HOH HOH . 
I 3 HOH A 38 838 42 HOH HOH . 
I 3 HOH A 39 839 7 HOH HOH . 
I 3 HOH A 40 840 61 HOH HOH . 
I 3 HOH A 41 841 211 HOH HOH . 
I 3 HOH A 42 842 150 HOH HOH . 
I 3 HOH A 43 843 44 HOH HOH . 
I 3 HOH A 44 844 125 HOH HOH . 
I 3 HOH A 45 845 143 HOH HOH . 
I 3 HOH A 46 846 17 HOH HOH . 
I 3 HOH A 47 847 79 HOH HOH . 
I 3 HOH A 48 848 101 HOH HOH . 
I 3 HOH A 49 849 111 HOH HOH . 
I 3 HOH A 50 850 41 HOH HOH . 
I 3 HOH A 51 851 98 HOH HOH . 
I 3 HOH A 52 852 146 HOH HOH . 
I 3 HOH A 53 853 139 HOH HOH . 
I 3 HOH A 54 854 160 HOH HOH . 
I 3 HOH A 55 855 81 HOH HOH . 
I 3 HOH A 56 856 169 HOH HOH . 
I 3 HOH A 57 857 33 HOH HOH . 
I 3 HOH A 58 858 202 HOH HOH . 
I 3 HOH A 59 859 20 HOH HOH . 
I 3 HOH A 60 860 199 HOH HOH . 
I 3 HOH A 61 861 138 HOH HOH . 
I 3 HOH A 62 862 113 HOH HOH . 
I 3 HOH A 63 863 121 HOH HOH . 
I 3 HOH A 64 864 207 HOH HOH . 
I 3 HOH A 65 865 57 HOH HOH . 
I 3 HOH A 66 866 62 HOH HOH . 
I 3 HOH A 67 867 31 HOH HOH . 
I 3 HOH A 68 868 223 HOH HOH . 
I 3 HOH A 69 869 187 HOH HOH . 
I 3 HOH A 70 870 82 HOH HOH . 
I 3 HOH A 71 871 212 HOH HOH . 
I 3 HOH A 72 872 86 HOH HOH . 
I 3 HOH A 73 873 179 HOH HOH . 
I 3 HOH A 74 874 198 HOH HOH . 
I 3 HOH A 75 875 205 HOH HOH . 
I 3 HOH A 76 876 172 HOH HOH . 
J 3 HOH B 1 801 124 HOH HOH . 
J 3 HOH B 2 802 109 HOH HOH . 
J 3 HOH B 3 803 106 HOH HOH . 
J 3 HOH B 4 804 15 HOH HOH . 
J 3 HOH B 5 805 22 HOH HOH . 
J 3 HOH B 6 806 157 HOH HOH . 
J 3 HOH B 7 807 148 HOH HOH . 
J 3 HOH B 8 808 10 HOH HOH . 
J 3 HOH B 9 809 47 HOH HOH . 
J 3 HOH B 10 810 35 HOH HOH . 
J 3 HOH B 11 811 67 HOH HOH . 
J 3 HOH B 12 812 174 HOH HOH . 
J 3 HOH B 13 813 213 HOH HOH . 
J 3 HOH B 14 814 184 HOH HOH . 
J 3 HOH B 15 815 8 HOH HOH . 
J 3 HOH B 16 816 176 HOH HOH . 
J 3 HOH B 17 817 34 HOH HOH . 
J 3 HOH B 18 818 155 HOH HOH . 
J 3 HOH B 19 819 141 HOH HOH . 
J 3 HOH B 20 820 144 HOH HOH . 
J 3 HOH B 21 821 60 HOH HOH . 
J 3 HOH B 22 822 135 HOH HOH . 
J 3 HOH B 23 823 43 HOH HOH . 
J 3 HOH B 24 824 194 HOH HOH . 
J 3 HOH B 25 825 95 HOH HOH . 
J 3 HOH B 26 826 89 HOH HOH . 
J 3 HOH B 27 827 27 HOH HOH . 
J 3 HOH B 28 828 123 HOH HOH . 
J 3 HOH B 29 829 133 HOH HOH . 
J 3 HOH B 30 830 91 HOH HOH . 
J 3 HOH B 31 831 13 HOH HOH . 
J 3 HOH B 32 832 145 HOH HOH . 
J 3 HOH B 33 833 231 HOH HOH . 
J 3 HOH B 34 834 193 HOH HOH . 
J 3 HOH B 35 835 58 HOH HOH . 
J 3 HOH B 36 836 171 HOH HOH . 
J 3 HOH B 37 837 14 HOH HOH . 
J 3 HOH B 38 838 65 HOH HOH . 
J 3 HOH B 39 839 21 HOH HOH . 
J 3 HOH B 40 840 99 HOH HOH . 
J 3 HOH B 41 841 104 HOH HOH . 
J 3 HOH B 42 842 66 HOH HOH . 
J 3 HOH B 43 843 49 HOH HOH . 
J 3 HOH B 44 844 90 HOH HOH . 
J 3 HOH B 45 845 177 HOH HOH . 
J 3 HOH B 46 846 227 HOH HOH . 
J 3 HOH B 47 847 84 HOH HOH . 
J 3 HOH B 48 848 209 HOH HOH . 
J 3 HOH B 49 849 54 HOH HOH . 
J 3 HOH B 50 850 147 HOH HOH . 
J 3 HOH B 51 851 128 HOH HOH . 
J 3 HOH B 52 852 232 HOH HOH . 
J 3 HOH B 53 853 72 HOH HOH . 
J 3 HOH B 54 854 167 HOH HOH . 
J 3 HOH B 55 855 208 HOH HOH . 
J 3 HOH B 56 856 140 HOH HOH . 
J 3 HOH B 57 857 185 HOH HOH . 
J 3 HOH B 58 858 164 HOH HOH . 
J 3 HOH B 59 859 192 HOH HOH . 
J 3 HOH B 60 860 163 HOH HOH . 
J 3 HOH B 61 861 48 HOH HOH . 
J 3 HOH B 62 862 220 HOH HOH . 
J 3 HOH B 63 863 75 HOH HOH . 
J 3 HOH B 64 864 183 HOH HOH . 
J 3 HOH B 65 865 173 HOH HOH . 
K 3 HOH C 1 801 142 HOH HOH . 
K 3 HOH C 2 802 196 HOH HOH . 
K 3 HOH C 3 803 180 HOH HOH . 
K 3 HOH C 4 804 175 HOH HOH . 
K 3 HOH C 5 805 200 HOH HOH . 
K 3 HOH C 6 806 216 HOH HOH . 
K 3 HOH C 7 807 178 HOH HOH . 
K 3 HOH C 8 808 46 HOH HOH . 
K 3 HOH C 9 809 190 HOH HOH . 
K 3 HOH C 10 810 80 HOH HOH . 
K 3 HOH C 11 811 19 HOH HOH . 
K 3 HOH C 12 812 158 HOH HOH . 
K 3 HOH C 13 813 63 HOH HOH . 
K 3 HOH C 14 814 204 HOH HOH . 
K 3 HOH C 15 815 97 HOH HOH . 
K 3 HOH C 16 816 83 HOH HOH . 
K 3 HOH C 17 817 11 HOH HOH . 
K 3 HOH C 18 818 112 HOH HOH . 
K 3 HOH C 19 819 12 HOH HOH . 
K 3 HOH C 20 820 134 HOH HOH . 
K 3 HOH C 21 821 94 HOH HOH . 
K 3 HOH C 22 822 88 HOH HOH . 
K 3 HOH C 23 823 92 HOH HOH . 
K 3 HOH C 24 824 9 HOH HOH . 
K 3 HOH C 25 825 36 HOH HOH . 
K 3 HOH C 26 826 224 HOH HOH . 
K 3 HOH C 27 827 226 HOH HOH . 
K 3 HOH C 28 828 221 HOH HOH . 
K 3 HOH C 29 829 107 HOH HOH . 
K 3 HOH C 30 830 29 HOH HOH . 
K 3 HOH C 31 831 188 HOH HOH . 
K 3 HOH C 32 832 78 HOH HOH . 
K 3 HOH C 33 833 149 HOH HOH . 
K 3 HOH C 34 834 230 HOH HOH . 
K 3 HOH C 35 835 52 HOH HOH . 
K 3 HOH C 36 836 102 HOH HOH . 
K 3 HOH C 37 837 189 HOH HOH . 
K 3 HOH C 38 838 159 HOH HOH . 
K 3 HOH C 39 839 70 HOH HOH . 
K 3 HOH C 40 840 151 HOH HOH . 
K 3 HOH C 41 841 225 HOH HOH . 
K 3 HOH C 42 842 219 HOH HOH . 
L 3 HOH D 1 801 30 HOH HOH . 
L 3 HOH D 2 802 68 HOH HOH . 
L 3 HOH D 3 803 214 HOH HOH . 
L 3 HOH D 4 804 186 HOH HOH . 
L 3 HOH D 5 805 197 HOH HOH . 
L 3 HOH D 6 806 132 HOH HOH . 
L 3 HOH D 7 807 152 HOH HOH . 
L 3 HOH D 8 808 25 HOH HOH . 
L 3 HOH D 9 809 182 HOH HOH . 
L 3 HOH D 10 810 229 HOH HOH . 
L 3 HOH D 11 811 166 HOH HOH . 
L 3 HOH D 12 812 218 HOH HOH . 
L 3 HOH D 13 813 126 HOH HOH . 
L 3 HOH D 14 814 64 HOH HOH . 
L 3 HOH D 15 815 6 HOH HOH . 
L 3 HOH D 16 816 26 HOH HOH . 
L 3 HOH D 17 817 127 HOH HOH . 
L 3 HOH D 18 818 3 HOH HOH . 
L 3 HOH D 19 819 37 HOH HOH . 
L 3 HOH D 20 820 69 HOH HOH . 
L 3 HOH D 21 821 4 HOH HOH . 
L 3 HOH D 22 822 32 HOH HOH . 
L 3 HOH D 23 823 114 HOH HOH . 
L 3 HOH D 24 824 130 HOH HOH . 
L 3 HOH D 25 825 40 HOH HOH . 
L 3 HOH D 26 826 153 HOH HOH . 
L 3 HOH D 27 827 233 HOH HOH . 
L 3 HOH D 28 828 131 HOH HOH . 
L 3 HOH D 29 829 103 HOH HOH . 
L 3 HOH D 30 830 170 HOH HOH . 
L 3 HOH D 31 831 118 HOH HOH . 
L 3 HOH D 32 832 28 HOH HOH . 
L 3 HOH D 33 833 165 HOH HOH . 
L 3 HOH D 34 834 162 HOH HOH . 
L 3 HOH D 35 835 181 HOH HOH . 
L 3 HOH D 36 836 129 HOH HOH . 
L 3 HOH D 37 837 206 HOH HOH . 
L 3 HOH D 38 838 217 HOH HOH . 
L 3 HOH D 39 839 203 HOH HOH . 
L 3 HOH D 40 840 228 HOH HOH . 
L 3 HOH D 41 841 154 HOH HOH . 
L 3 HOH D 42 842 73 HOH HOH . 
L 3 HOH D 43 843 210 HOH HOH . 
L 3 HOH D 44 844 38 HOH HOH . 
L 3 HOH D 45 845 77 HOH HOH . 
L 3 HOH D 46 846 93 HOH HOH . 
L 3 HOH D 47 847 191 HOH HOH . 
L 3 HOH D 48 848 156 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 SJ5 . . . F 2 44.631 8.567 66.871 1 27.66 ? C2 SJ5 701 B 1 
HETATM 2 C C3 SJ5 . . . F 2 45.628 8.054 65.854 1 27.66 ? C3 SJ5 701 B 1 
HETATM 3 O O3 SJ5 . . . F 2 46.472 7.111 66.522 1 27.66 ? O3 SJ5 701 B 1 
HETATM 4 N N SJ5 . . . F 2 43.63 9.395 66.245 1 27.66 ? N SJ5 701 B 1 
HETATM 5 C C7 SJ5 . . . F 2 42.904 8.886 65.091 1 27.66 ? C7 SJ5 701 B 1 
HETATM 6 C C5 SJ5 . . . F 2 43.872 8.33 64.042 1 27.66 ? C5 SJ5 701 B 1 
HETATM 7 C C6 SJ5 . . . F 2 43.114 7.576 62.985 1 27.66 ? C6 SJ5 701 B 1 
HETATM 8 O O62 SJ5 . . . F 2 42.104 6.938 63.276 1 27.66 ? O62 SJ5 701 B 1 
HETATM 9 C C4 SJ5 . . . F 2 44.904 7.398 64.676 1 27.66 ? C4 SJ5 701 B 1 
HETATM 10 O O4 SJ5 . . . F 2 45.855 7.009 63.675 1 27.66 ? O4 SJ5 701 B 1 
HETATM 11 O O61 SJ5 . . . F 2 43.541 7.586 61.722 1 27.66 ? O61 SJ5 701 B 1 
#
_model_server_stats.io_time_ms              114 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    51 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           11 
#