data_6LEJ
#
_model_server_result.job_id            X2iXircyNaCIdlO7GzZ__A 
_model_server_result.datetime_utc      '2024-11-30 23:32:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6lej 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":701}' 
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_entry.id    6LEJ 
#
_exptl.entry_id    6LEJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              203.236 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2~{S},3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-2-propyl-piperidine-3-carboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          124.85 
_cell.angle_gamma         90 
_cell.entry_id            6LEJ 
_cell.length_a            167.686 
_cell.length_b            76.551 
_cell.length_c            125.426 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LEJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -71.672171 0 102.930954 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
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_chem_comp.formula           'C9 H17 N O4' 
_chem_comp.formula_weight    203.236 
_chem_comp.id                CKX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2~{S},3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-2-propyl-piperidine-3-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3 C3 CKX sing 70 n n 
O4 C4 CKX sing 71 n n 
C3 C4 CKX sing 72 n n 
C3 C2 CKX sing 73 n n 
C4 C5 CKX sing 74 n n 
C2 N CKX sing 75 n n 
C5 C6 CKX sing 76 n n 
C5 C7 CKX sing 77 n n 
O61 C6 CKX doub 78 n n 
N C7 CKX sing 79 n n 
C6 O62 CKX sing 80 n n 
C7 C8 CKX sing 81 n n 
C8 C9 CKX sing 82 n n 
C9 C10 CKX sing 83 n n 
N H1 CKX sing 84 n n 
C10 H3 CKX sing 85 n n 
C10 H4 CKX sing 86 n n 
C10 H5 CKX sing 87 n n 
C2 H6 CKX sing 88 n n 
C2 H7 CKX sing 89 n n 
C3 H8 CKX sing 90 n n 
C4 H9 CKX sing 91 n n 
C5 H10 CKX sing 92 n n 
C7 H11 CKX sing 93 n n 
C8 H12 CKX sing 94 n n 
C8 H13 CKX sing 95 n n 
C9 H14 CKX sing 96 n n 
C9 H15 CKX sing 97 n n 
O3 H16 CKX sing 98 n n 
O4 H17 CKX sing 99 n n 
O62 H18 CKX sing 100 n n 
#
_atom_sites.entry_id                     6LEJ 
_atom_sites.fract_transf_matrix[1][1]    0.005964 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004152 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013063 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009715 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CKX A 1 701 1 CKX C3 . 
D 3 CKX B 1 701 2 CKX C3 . 
E 4 HOH A 1 801 27 HOH HOH . 
E 4 HOH A 2 802 15 HOH HOH . 
E 4 HOH A 3 803 28 HOH HOH . 
E 4 HOH A 4 804 32 HOH HOH . 
E 4 HOH A 5 805 24 HOH HOH . 
E 4 HOH A 6 806 25 HOH HOH . 
E 4 HOH A 7 807 9 HOH HOH . 
E 4 HOH A 8 808 43 HOH HOH . 
E 4 HOH A 9 809 47 HOH HOH . 
E 4 HOH A 10 810 1 HOH HOH . 
E 4 HOH A 11 811 34 HOH HOH . 
E 4 HOH A 12 812 22 HOH HOH . 
E 4 HOH A 13 813 10 HOH HOH . 
E 4 HOH A 14 814 29 HOH HOH . 
E 4 HOH A 15 815 13 HOH HOH . 
E 4 HOH A 16 816 61 HOH HOH . 
E 4 HOH A 17 817 39 HOH HOH . 
E 4 HOH A 18 818 7 HOH HOH . 
E 4 HOH A 19 819 19 HOH HOH . 
E 4 HOH A 20 820 21 HOH HOH . 
E 4 HOH A 21 821 54 HOH HOH . 
E 4 HOH A 22 822 4 HOH HOH . 
E 4 HOH A 23 823 14 HOH HOH . 
E 4 HOH A 24 824 18 HOH HOH . 
E 4 HOH A 25 825 56 HOH HOH . 
E 4 HOH A 26 826 65 HOH HOH . 
E 4 HOH A 27 827 38 HOH HOH . 
E 4 HOH A 28 828 49 HOH HOH . 
E 4 HOH A 29 829 46 HOH HOH . 
E 4 HOH A 30 830 33 HOH HOH . 
E 4 HOH A 31 831 40 HOH HOH . 
E 4 HOH A 32 832 31 HOH HOH . 
E 4 HOH A 33 833 37 HOH HOH . 
E 4 HOH A 34 834 50 HOH HOH . 
E 4 HOH A 35 835 60 HOH HOH . 
E 4 HOH A 36 836 11 HOH HOH . 
E 4 HOH A 37 837 36 HOH HOH . 
E 4 HOH A 38 838 53 HOH HOH . 
E 4 HOH A 39 839 5 HOH HOH . 
E 4 HOH A 40 840 2 HOH HOH . 
F 4 HOH B 1 801 44 HOH HOH . 
F 4 HOH B 2 802 59 HOH HOH . 
F 4 HOH B 3 803 35 HOH HOH . 
F 4 HOH B 4 804 41 HOH HOH . 
F 4 HOH B 5 805 48 HOH HOH . 
F 4 HOH B 6 806 26 HOH HOH . 
F 4 HOH B 7 807 52 HOH HOH . 
F 4 HOH B 8 808 55 HOH HOH . 
F 4 HOH B 9 809 45 HOH HOH . 
F 4 HOH B 10 810 8 HOH HOH . 
F 4 HOH B 11 811 51 HOH HOH . 
F 4 HOH B 12 812 17 HOH HOH . 
F 4 HOH B 13 813 42 HOH HOH . 
F 4 HOH B 14 814 63 HOH HOH . 
F 4 HOH B 15 815 16 HOH HOH . 
F 4 HOH B 16 816 20 HOH HOH . 
F 4 HOH B 17 817 62 HOH HOH . 
F 4 HOH B 18 818 3 HOH HOH . 
F 4 HOH B 19 819 12 HOH HOH . 
F 4 HOH B 20 820 6 HOH HOH . 
F 4 HOH B 21 821 58 HOH HOH . 
F 4 HOH B 22 822 23 HOH HOH . 
F 4 HOH B 23 823 30 HOH HOH . 
F 4 HOH B 24 824 57 HOH HOH . 
F 4 HOH B 25 825 64 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N CKX . . . D 3 -50.735 -47.402 31.322 1 50.96 ? N CKX 701 B 1 
HETATM 2 C C10 CKX . . . D 3 -54.331 -47.447 34.028 1 50.75 ? C10 CKX 701 B 1 
HETATM 3 C C2 CKX . . . D 3 -49.989 -46.732 30.247 1 50.63 ? C2 CKX 701 B 1 
HETATM 4 C C3 CKX . . . D 3 -48.636 -46.257 30.727 1 49.03 ? C3 CKX 701 B 1 
HETATM 5 C C4 CKX . . . D 3 -48.774 -45.403 31.957 1 46.12 ? C4 CKX 701 B 1 
HETATM 6 C C5 CKX . . . D 3 -49.553 -46.187 32.99 1 46.63 ? C5 CKX 701 B 1 
HETATM 7 C C6 CKX . . . D 3 -49.529 -45.397 34.255 1 43.89 ? C6 CKX 701 B 1 
HETATM 8 C C7 CKX . . . D 3 -50.945 -46.443 32.414 1 48.07 ? C7 CKX 701 B 1 
HETATM 9 C C8 CKX . . . D 3 -51.945 -47.06 33.387 1 48.73 ? C8 CKX 701 B 1 
HETATM 10 C C9 CKX . . . D 3 -53.402 -46.879 32.971 1 48.47 ? C9 CKX 701 B 1 
HETATM 11 O O3 CKX . . . D 3 -48.107 -45.384 29.746 1 48.55 ? O3 CKX 701 B 1 
HETATM 12 O O4 CKX . . . D 3 -47.453 -45.082 32.4 1 44.8 ? O4 CKX 701 B 1 
HETATM 13 O O61 CKX . . . D 3 -50.616 -44.819 34.739 1 42.55 ? O61 CKX 701 B 1 
HETATM 14 O O62 CKX . . . D 3 -48.484 -45.254 34.852 1 42.92 ? O62 CKX 701 B 1 
#
_model_server_stats.io_time_ms              46 
_model_server_stats.parse_time_ms           33 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           14 
#