data_6LEL # _model_server_result.job_id PxuNjGioeutuLMf7xjjZ9Q _model_server_result.datetime_utc '2024-11-24 13:58:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lel # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 6LEL # _exptl.entry_id 6LEL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 245.315 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{S},3~{S},4~{R},5~{R})-2-hexyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 124.64 _cell.angle_gamma 90 _cell.entry_id 6LEL _cell.length_a 165.781 _cell.length_b 76.72 _cell.length_c 124.888 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LEL _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C12 H23 N O4' _chem_comp.formula_weight 245.315 _chem_comp.id E8X _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{S},3~{S},4~{R},5~{R})-2-hexyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C12 E8X sing 83 n n C12 C11 E8X sing 84 n n C11 C10 E8X sing 85 n n C10 C9 E8X sing 86 n n O61 C6 E8X doub 87 n n O62 C6 E8X sing 88 n n C9 C8 E8X sing 89 n n C6 C5 E8X sing 90 n n C8 C7 E8X sing 91 n n C5 C7 E8X sing 92 n n C5 C4 E8X sing 93 n n C7 N E8X sing 94 n n O4 C4 E8X sing 95 n n C4 C3 E8X sing 96 n n N C2 E8X sing 97 n n C3 C2 E8X sing 98 n n C3 O3 E8X sing 99 n n C5 H1 E8X sing 100 n n C4 H2 E8X sing 101 n n O4 H3 E8X sing 102 n n C3 H4 E8X sing 103 n n O3 H5 E8X sing 104 n n C2 H6 E8X sing 105 n n C2 H7 E8X sing 106 n n C7 H8 E8X sing 107 n n C8 H9 E8X sing 108 n n C8 H10 E8X sing 109 n n C9 H11 E8X sing 110 n n C9 H12 E8X sing 111 n n N H13 E8X sing 112 n n O62 H15 E8X sing 113 n n C10 H16 E8X sing 114 n n C10 H17 E8X sing 115 n n C11 H18 E8X sing 116 n n C11 H19 E8X sing 117 n n C12 H20 E8X sing 118 n n C12 H21 E8X sing 119 n n C13 H22 E8X sing 120 n n C13 H23 E8X sing 121 n n C13 H24 E8X sing 122 n n # _atom_sites.entry_id 6LEL _atom_sites.fract_transf_matrix[1][1] 0.006032 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004167 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013034 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009732 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 E8X A 1 701 1 E8X C6 . D 2 E8X B 1 701 2 E8X C6 . E 3 HOH A 1 801 78 HOH HOH . E 3 HOH A 2 802 27 HOH HOH . E 3 HOH A 3 803 118 HOH HOH . E 3 HOH A 4 804 73 HOH HOH . E 3 HOH A 5 805 116 HOH HOH . E 3 HOH A 6 806 101 HOH HOH . E 3 HOH A 7 807 77 HOH HOH . E 3 HOH A 8 808 7 HOH HOH . E 3 HOH A 9 809 112 HOH HOH . E 3 HOH A 10 810 60 HOH HOH . E 3 HOH A 11 811 16 HOH HOH . E 3 HOH A 12 812 22 HOH HOH . E 3 HOH A 13 813 62 HOH HOH . E 3 HOH A 14 814 80 HOH HOH . E 3 HOH A 15 815 124 HOH HOH . E 3 HOH A 16 816 3 HOH HOH . E 3 HOH A 17 817 98 HOH HOH . E 3 HOH A 18 818 64 HOH HOH . E 3 HOH A 19 819 33 HOH HOH . E 3 HOH A 20 820 42 HOH HOH . E 3 HOH A 21 821 50 HOH HOH . E 3 HOH A 22 822 52 HOH HOH . E 3 HOH A 23 823 8 HOH HOH . E 3 HOH A 24 824 21 HOH HOH . E 3 HOH A 25 825 67 HOH HOH . E 3 HOH A 26 826 46 HOH HOH . E 3 HOH A 27 827 70 HOH HOH . E 3 HOH A 28 828 69 HOH HOH . E 3 HOH A 29 829 28 HOH HOH . E 3 HOH A 30 830 26 HOH HOH . E 3 HOH A 31 831 123 HOH HOH . E 3 HOH A 32 832 48 HOH HOH . E 3 HOH A 33 833 85 HOH HOH . E 3 HOH A 34 834 6 HOH HOH . E 3 HOH A 35 835 38 HOH HOH . E 3 HOH A 36 836 34 HOH HOH . E 3 HOH A 37 837 37 HOH HOH . E 3 HOH A 38 838 79 HOH HOH . E 3 HOH A 39 839 24 HOH HOH . E 3 HOH A 40 840 12 HOH HOH . E 3 HOH A 41 841 4 HOH HOH . E 3 HOH A 42 842 31 HOH HOH . E 3 HOH A 43 843 66 HOH HOH . E 3 HOH A 44 844 1 HOH HOH . E 3 HOH A 45 845 57 HOH HOH . E 3 HOH A 46 846 23 HOH HOH . E 3 HOH A 47 847 2 HOH HOH . E 3 HOH A 48 848 49 HOH HOH . E 3 HOH A 49 849 54 HOH HOH . E 3 HOH A 50 850 45 HOH HOH . E 3 HOH A 51 851 35 HOH HOH . E 3 HOH A 52 852 5 HOH HOH . E 3 HOH A 53 853 107 HOH HOH . E 3 HOH A 54 854 83 HOH HOH . E 3 HOH A 55 855 58 HOH HOH . E 3 HOH A 56 856 13 HOH HOH . E 3 HOH A 57 857 15 HOH HOH . E 3 HOH A 58 858 10 HOH HOH . E 3 HOH A 59 859 88 HOH HOH . E 3 HOH A 60 860 82 HOH HOH . E 3 HOH A 61 861 76 HOH HOH . E 3 HOH A 62 862 93 HOH HOH . E 3 HOH A 63 863 92 HOH HOH . E 3 HOH A 64 864 68 HOH HOH . E 3 HOH A 65 865 86 HOH HOH . E 3 HOH A 66 866 53 HOH HOH . E 3 HOH A 67 867 44 HOH HOH . E 3 HOH A 68 868 122 HOH HOH . E 3 HOH A 69 869 81 HOH HOH . E 3 HOH A 70 870 75 HOH HOH . E 3 HOH A 71 871 71 HOH HOH . E 3 HOH A 72 872 74 HOH HOH . E 3 HOH A 73 873 117 HOH HOH . E 3 HOH A 74 874 91 HOH HOH . E 3 HOH A 75 875 36 HOH HOH . E 3 HOH A 76 876 114 HOH HOH . E 3 HOH A 77 877 55 HOH HOH . E 3 HOH A 78 878 84 HOH HOH . E 3 HOH A 79 879 104 HOH HOH . E 3 HOH A 80 880 41 HOH HOH . E 3 HOH A 81 881 102 HOH HOH . E 3 HOH A 82 882 105 HOH HOH . E 3 HOH A 83 883 109 HOH HOH . F 3 HOH B 1 801 89 HOH HOH . F 3 HOH B 2 802 103 HOH HOH . F 3 HOH B 3 803 19 HOH HOH . F 3 HOH B 4 804 99 HOH HOH . F 3 HOH B 5 805 87 HOH HOH . F 3 HOH B 6 806 20 HOH HOH . F 3 HOH B 7 807 51 HOH HOH . F 3 HOH B 8 808 119 HOH HOH . F 3 HOH B 9 809 120 HOH HOH . F 3 HOH B 10 810 113 HOH HOH . F 3 HOH B 11 811 121 HOH HOH . F 3 HOH B 12 812 95 HOH HOH . F 3 HOH B 13 813 11 HOH HOH . F 3 HOH B 14 814 47 HOH HOH . F 3 HOH B 15 815 115 HOH HOH . F 3 HOH B 16 816 106 HOH HOH . F 3 HOH B 17 817 72 HOH HOH . F 3 HOH B 18 818 96 HOH HOH . F 3 HOH B 19 819 39 HOH HOH . F 3 HOH B 20 820 29 HOH HOH . F 3 HOH B 21 821 40 HOH HOH . F 3 HOH B 22 822 94 HOH HOH . F 3 HOH B 23 823 108 HOH HOH . F 3 HOH B 24 824 18 HOH HOH . F 3 HOH B 25 825 110 HOH HOH . F 3 HOH B 26 826 43 HOH HOH . F 3 HOH B 27 827 25 HOH HOH . F 3 HOH B 28 828 30 HOH HOH . F 3 HOH B 29 829 97 HOH HOH . F 3 HOH B 30 830 100 HOH HOH . F 3 HOH B 31 831 32 HOH HOH . F 3 HOH B 32 832 125 HOH HOH . F 3 HOH B 33 833 14 HOH HOH . F 3 HOH B 34 834 9 HOH HOH . F 3 HOH B 35 835 17 HOH HOH . F 3 HOH B 36 836 90 HOH HOH . F 3 HOH B 37 837 56 HOH HOH . F 3 HOH B 38 838 59 HOH HOH . F 3 HOH B 39 839 63 HOH HOH . F 3 HOH B 40 840 111 HOH HOH . F 3 HOH B 41 841 65 HOH HOH . F 3 HOH B 42 842 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 E8X . . . C 2 -21.832 8.408 -1.155 1 18.93 ? C6 E8X 701 A 1 HETATM 2 C C5 E8X . . . C 2 -22.777 9.19 -0.27 1 18.93 ? C5 E8X 701 A 1 HETATM 3 C C4 E8X . . . C 2 -22.997 8.353 0.972 1 18.93 ? C4 E8X 701 A 1 HETATM 4 O O4 E8X . . . C 2 -21.718 7.922 1.481 1 18.93 ? O4 E8X 701 A 1 HETATM 5 C C3 E8X . . . C 2 -23.857 9.182 1.923 1 18.93 ? C3 E8X 701 A 1 HETATM 6 O O3 E8X . . . C 2 -24.182 8.387 3.068 1 18.93 ? O3 E8X 701 A 1 HETATM 7 C C2 E8X . . . C 2 -25.171 9.581 1.262 1 18.93 ? C2 E8X 701 A 1 HETATM 8 C C7 E8X . . . C 2 -24.134 9.454 -0.894 1 18.93 ? C7 E8X 701 A 1 HETATM 9 C C8 E8X . . . C 2 -23.897 10.242 -2.154 1 18.93 ? C8 E8X 701 A 1 HETATM 10 C C9 E8X . . . C 2 -24.238 9.4 -3.365 1 18.93 ? C9 E8X 701 A 1 HETATM 11 N N E8X . . . C 2 -24.952 10.297 -0.005 1 18.93 ? N E8X 701 A 1 HETATM 12 O O61 E8X . . . C 2 -22.268 7.617 -1.981 1 18.93 ? O61 E8X 701 A 1 HETATM 13 O O62 E8X . . . C 2 -20.513 8.515 -1.004 1 18.93 ? O62 E8X 701 A 1 HETATM 14 C C10 E8X . . . C 2 -25.488 9.891 -4.061 1 18.93 ? C10 E8X 701 A 1 HETATM 15 C C11 E8X . . . C 2 -25.131 9.906 -5.547 1 18.93 ? C11 E8X 701 A 1 HETATM 16 C C12 E8X . . . C 2 -26.318 10.449 -6.33 1 18.93 ? C12 E8X 701 A 1 HETATM 17 C C13 E8X . . . C 2 -26.06 10.27 -7.813 1 18.93 ? C13 E8X 701 A 1 # _model_server_stats.io_time_ms 84 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #