data_6LEU # _model_server_result.job_id 8eG9jPHmKDDcKdkYQsyQJQ _model_server_result.datetime_utc '2024-11-15 06:46:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6leu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 6LEU # _exptl.entry_id 6LEU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LEU _cell.length_a 56.308 _cell.length_b 154.488 _cell.length_c 163.939 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LEU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 295 n n PA O2A NDP sing 296 n n PA O5B NDP sing 297 n n PA O3 NDP sing 298 n n O2A HOA2 NDP sing 299 n n O5B C5B NDP sing 300 n n C5B C4B NDP sing 301 n n C5B H51A NDP sing 302 n n C5B H52A NDP sing 303 n n C4B O4B NDP sing 304 n n C4B C3B NDP sing 305 n n C4B H4B NDP sing 306 n n O4B C1B NDP sing 307 n n C3B O3B NDP sing 308 n n C3B C2B NDP sing 309 n n C3B H3B NDP sing 310 n n O3B HO3A NDP sing 311 n n C2B O2B NDP sing 312 n n C2B C1B NDP sing 313 n n C2B H2B NDP sing 314 n n O2B P2B NDP sing 315 n n C1B N9A NDP sing 316 n n C1B H1B NDP sing 317 n n N9A C8A NDP sing 318 n y N9A C4A NDP sing 319 n y C8A N7A NDP doub 320 n y C8A H8A NDP sing 321 n n N7A C5A NDP sing 322 n y C5A C6A NDP sing 323 n y C5A C4A NDP doub 324 n y C6A N6A NDP sing 325 n n C6A N1A NDP doub 326 n y N6A H61A NDP sing 327 n n N6A H62A NDP sing 328 n n N1A C2A NDP sing 329 n y C2A N3A NDP doub 330 n y C2A H2A NDP sing 331 n n N3A C4A NDP sing 332 n y O3 PN NDP sing 333 n n PN O1N NDP doub 334 n n PN O2N NDP sing 335 n n PN O5D NDP sing 336 n n O2N H21N NDP sing 337 n n O5D C5D NDP sing 338 n n C5D C4D NDP sing 339 n n C5D H51N NDP sing 340 n n C5D H52N NDP sing 341 n n C4D O4D NDP sing 342 n n C4D C3D NDP sing 343 n n C4D H4D NDP sing 344 n n O4D C1D NDP sing 345 n n C3D O3D NDP sing 346 n n C3D C2D NDP sing 347 n n C3D H3D NDP sing 348 n n O3D HO3N NDP sing 349 n n C2D O2D NDP sing 350 n n C2D C1D NDP sing 351 n n C2D H2D NDP sing 352 n n O2D HO2N NDP sing 353 n n C1D N1N NDP sing 354 n n C1D H1D NDP sing 355 n n N1N C2N NDP sing 356 n n N1N C6N NDP sing 357 n n C2N C3N NDP doub 358 n n C2N H2N NDP sing 359 n n C3N C7N NDP sing 360 n n C3N C4N NDP sing 361 n n C7N O7N NDP doub 362 n n C7N N7N NDP sing 363 n n N7N H71N NDP sing 364 n n N7N H72N NDP sing 365 n n C4N C5N NDP sing 366 n n C4N H41N NDP sing 367 n n C4N H42N NDP sing 368 n n C5N C6N NDP doub 369 n n C5N H5N NDP sing 370 n n C6N H6N NDP sing 371 n n P2B O1X NDP doub 372 n n P2B O2X NDP sing 373 n n P2B O3X NDP sing 374 n n O2X HOP2 NDP sing 375 n n O3X HOP3 NDP sing 376 n n # _atom_sites.entry_id 6LEU _atom_sites.fract_transf_matrix[1][1] 0.017759 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006473 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0061 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UMP A 1 701 701 UMP UMP . D 3 NDP A 1 702 801 NDP NDP . E 4 E9X A 1 703 901 E9X DRG . F 2 UMP B 1 701 701 UMP UMP . G 3 NDP B 1 702 801 NDP NDP . H 4 E9X B 1 703 901 E9X DRG . I 5 HOH A 1 801 70 HOH HOH . I 5 HOH A 2 802 39 HOH HOH . I 5 HOH A 3 803 25 HOH HOH . I 5 HOH A 4 804 80 HOH HOH . I 5 HOH A 5 805 54 HOH HOH . I 5 HOH A 6 806 78 HOH HOH . I 5 HOH A 7 807 57 HOH HOH . I 5 HOH A 8 808 64 HOH HOH . I 5 HOH A 9 809 44 HOH HOH . I 5 HOH A 10 810 7 HOH HOH . I 5 HOH A 11 811 5 HOH HOH . I 5 HOH A 12 812 43 HOH HOH . I 5 HOH A 13 813 98 HOH HOH . I 5 HOH A 14 814 102 HOH HOH . I 5 HOH A 15 815 35 HOH HOH . I 5 HOH A 16 816 90 HOH HOH . I 5 HOH A 17 817 89 HOH HOH . I 5 HOH A 18 818 96 HOH HOH . I 5 HOH A 19 819 23 HOH HOH . I 5 HOH A 20 820 94 HOH HOH . I 5 HOH A 21 821 111 HOH HOH . I 5 HOH A 22 822 10 HOH HOH . I 5 HOH A 23 823 67 HOH HOH . I 5 HOH A 24 824 109 HOH HOH . I 5 HOH A 25 825 114 HOH HOH . I 5 HOH A 26 826 60 HOH HOH . I 5 HOH A 27 827 97 HOH HOH . I 5 HOH A 28 828 46 HOH HOH . I 5 HOH A 29 829 4 HOH HOH . I 5 HOH A 30 830 20 HOH HOH . I 5 HOH A 31 831 79 HOH HOH . I 5 HOH A 32 832 100 HOH HOH . I 5 HOH A 33 833 22 HOH HOH . I 5 HOH A 34 834 61 HOH HOH . I 5 HOH A 35 835 31 HOH HOH . I 5 HOH A 36 836 66 HOH HOH . I 5 HOH A 37 837 58 HOH HOH . I 5 HOH A 38 838 75 HOH HOH . I 5 HOH A 39 839 87 HOH HOH . I 5 HOH A 40 840 115 HOH HOH . I 5 HOH A 41 841 108 HOH HOH . I 5 HOH A 42 842 41 HOH HOH . I 5 HOH A 43 843 6 HOH HOH . I 5 HOH A 44 844 17 HOH HOH . I 5 HOH A 45 845 8 HOH HOH . I 5 HOH A 46 846 12 HOH HOH . I 5 HOH A 47 847 18 HOH HOH . I 5 HOH A 48 848 19 HOH HOH . I 5 HOH A 49 849 59 HOH HOH . I 5 HOH A 50 850 103 HOH HOH . I 5 HOH A 51 851 65 HOH HOH . I 5 HOH A 52 852 83 HOH HOH . I 5 HOH A 53 853 112 HOH HOH . I 5 HOH A 54 854 16 HOH HOH . I 5 HOH A 55 855 72 HOH HOH . I 5 HOH A 56 856 101 HOH HOH . I 5 HOH A 57 857 84 HOH HOH . I 5 HOH A 58 858 113 HOH HOH . I 5 HOH A 59 859 50 HOH HOH . I 5 HOH A 60 860 107 HOH HOH . I 5 HOH A 61 861 104 HOH HOH . J 5 HOH B 1 801 30 HOH HOH . J 5 HOH B 2 802 37 HOH HOH . J 5 HOH B 3 803 14 HOH HOH . J 5 HOH B 4 804 88 HOH HOH . J 5 HOH B 5 805 116 HOH HOH . J 5 HOH B 6 806 91 HOH HOH . J 5 HOH B 7 807 63 HOH HOH . J 5 HOH B 8 808 1 HOH HOH . J 5 HOH B 9 809 13 HOH HOH . J 5 HOH B 10 810 47 HOH HOH . J 5 HOH B 11 811 27 HOH HOH . J 5 HOH B 12 812 26 HOH HOH . J 5 HOH B 13 813 81 HOH HOH . J 5 HOH B 14 814 92 HOH HOH . J 5 HOH B 15 815 29 HOH HOH . J 5 HOH B 16 816 24 HOH HOH . J 5 HOH B 17 817 53 HOH HOH . J 5 HOH B 18 818 82 HOH HOH . J 5 HOH B 19 819 51 HOH HOH . J 5 HOH B 20 820 9 HOH HOH . J 5 HOH B 21 821 2 HOH HOH . J 5 HOH B 22 822 52 HOH HOH . J 5 HOH B 23 823 122 HOH HOH . J 5 HOH B 24 824 110 HOH HOH . J 5 HOH B 25 825 99 HOH HOH . J 5 HOH B 26 826 28 HOH HOH . J 5 HOH B 27 827 68 HOH HOH . J 5 HOH B 28 828 56 HOH HOH . J 5 HOH B 29 829 120 HOH HOH . J 5 HOH B 30 830 3 HOH HOH . J 5 HOH B 31 831 55 HOH HOH . J 5 HOH B 32 832 77 HOH HOH . J 5 HOH B 33 833 74 HOH HOH . J 5 HOH B 34 834 21 HOH HOH . J 5 HOH B 35 835 62 HOH HOH . J 5 HOH B 36 836 40 HOH HOH . J 5 HOH B 37 837 76 HOH HOH . J 5 HOH B 38 838 33 HOH HOH . J 5 HOH B 39 839 69 HOH HOH . J 5 HOH B 40 840 38 HOH HOH . J 5 HOH B 41 841 85 HOH HOH . J 5 HOH B 42 842 34 HOH HOH . J 5 HOH B 43 843 45 HOH HOH . J 5 HOH B 44 844 15 HOH HOH . J 5 HOH B 45 845 93 HOH HOH . J 5 HOH B 46 846 48 HOH HOH . J 5 HOH B 47 847 95 HOH HOH . J 5 HOH B 48 848 11 HOH HOH . J 5 HOH B 49 849 71 HOH HOH . J 5 HOH B 50 850 86 HOH HOH . J 5 HOH B 51 851 42 HOH HOH . J 5 HOH B 52 852 49 HOH HOH . J 5 HOH B 53 853 32 HOH HOH . J 5 HOH B 54 854 36 HOH HOH . J 5 HOH B 55 855 73 HOH HOH . J 5 HOH B 56 856 117 HOH HOH . J 5 HOH B 57 857 118 HOH HOH . J 5 HOH B 58 858 119 HOH HOH . J 5 HOH B 59 859 121 HOH HOH . J 5 HOH B 60 860 123 HOH HOH . J 5 HOH B 61 861 105 HOH HOH . J 5 HOH B 62 862 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . D 3 -5.744 -4.46 68.747 1 22.03 ? PA NDP 702 A 1 HETATM 2 O O1A NDP . . . D 3 -6.812 -3.657 68.122 1 21.72 ? O1A NDP 702 A 1 HETATM 3 O O2A NDP . . . D 3 -4.46 -4.486 68.127 1 21.37 ? O2A NDP 702 A 1 HETATM 4 O O5B NDP . . . D 3 -5.286 -3.99 70.262 1 25.98 ? O5B NDP 702 A 1 HETATM 5 C C5B NDP . . . D 3 -6.342 -3.432 71.093 1 26.98 ? C5B NDP 702 A 1 HETATM 6 C C4B NDP . . . D 3 -5.731 -2.766 72.331 1 26.48 ? C4B NDP 702 A 1 HETATM 7 O O4B NDP . . . D 3 -5.385 -1.467 71.901 1 26.28 ? O4B NDP 702 A 1 HETATM 8 C C3B NDP . . . D 3 -6.772 -2.515 73.427 1 26.41 ? C3B NDP 702 A 1 HETATM 9 O O3B NDP . . . D 3 -6.769 -3.572 74.352 1 25.42 ? O3B NDP 702 A 1 HETATM 10 C C2B NDP . . . D 3 -6.171 -1.316 74.071 1 26.74 ? C2B NDP 702 A 1 HETATM 11 O O2B NDP . . . D 3 -4.903 -1.618 74.797 1 27.32 ? O2B NDP 702 A 1 HETATM 12 C C1B NDP . . . D 3 -5.768 -0.529 72.927 1 24.81 ? C1B NDP 702 A 1 HETATM 13 N N9A NDP . . . D 3 -6.762 0.349 72.368 1 23.91 ? N9A NDP 702 A 1 HETATM 14 C C8A NDP . . . D 3 -7.489 0.276 71.26 1 24.57 ? C8A NDP 702 A 1 HETATM 15 N N7A NDP . . . D 3 -8.183 1.41 71.137 1 23.04 ? N7A NDP 702 A 1 HETATM 16 C C5A NDP . . . D 3 -7.887 2.195 72.167 1 25.2 ? C5A NDP 702 A 1 HETATM 17 C C6A NDP . . . D 3 -8.281 3.445 72.543 1 24.78 ? C6A NDP 702 A 1 HETATM 18 N N6A NDP . . . D 3 -9.155 4.113 71.852 1 24.65 ? N6A NDP 702 A 1 HETATM 19 N N1A NDP . . . D 3 -7.786 4.032 73.605 1 24.89 ? N1A NDP 702 A 1 HETATM 20 C C2A NDP . . . D 3 -6.825 3.296 74.357 1 26.5 ? C2A NDP 702 A 1 HETATM 21 N N3A NDP . . . D 3 -6.448 2.019 73.977 1 24.53 ? N3A NDP 702 A 1 HETATM 22 C C4A NDP . . . D 3 -6.987 1.508 72.896 1 24.05 ? C4A NDP 702 A 1 HETATM 23 O O3 NDP . . . D 3 -6.35 -5.976 69.188 1 21.9 ? O3 NDP 702 A 1 HETATM 24 P PN NDP . . . D 3 -7.235 -7.096 68.347 1 23.06 ? PN NDP 702 A 1 HETATM 25 O O1N NDP . . . D 3 -7.099 -8.198 69.438 1 21.33 ? O1N NDP 702 A 1 HETATM 26 O O2N NDP . . . D 3 -8.348 -6.138 68.243 1 23.98 ? O2N NDP 702 A 1 HETATM 27 O O5D NDP . . . D 3 -6.043 -7.074 67.272 1 25.36 ? O5D NDP 702 A 1 HETATM 28 C C5D NDP . . . D 3 -4.759 -7.783 67.351 1 23.85 ? C5D NDP 702 A 1 HETATM 29 C C4D NDP . . . D 3 -4.934 -8.838 66.275 1 25.66 ? C4D NDP 702 A 1 HETATM 30 O O4D NDP . . . D 3 -4.901 -8.194 64.949 1 26.08 ? O4D NDP 702 A 1 HETATM 31 C C3D NDP . . . D 3 -3.759 -9.779 66.275 1 26.25 ? C3D NDP 702 A 1 HETATM 32 O O3D NDP . . . D 3 -4.221 -11.07 65.965 1 27.83 ? O3D NDP 702 A 1 HETATM 33 C C2D NDP . . . D 3 -2.837 -9.177 65.189 1 26.37 ? C2D NDP 702 A 1 HETATM 34 O O2D NDP . . . D 3 -1.792 -10.08 64.772 1 25.78 ? O2D NDP 702 A 1 HETATM 35 C C1D NDP . . . D 3 -3.883 -8.894 64.171 1 25.92 ? C1D NDP 702 A 1 HETATM 36 N N1N NDP . . . D 3 -3.616 -7.849 63.186 1 26.26 ? N1N NDP 702 A 1 HETATM 37 C C2N NDP . . . D 3 -3.9 -8.131 61.867 1 25.73 ? C2N NDP 702 A 1 HETATM 38 C C3N NDP . . . D 3 -3.732 -7.2 60.838 1 24.78 ? C3N NDP 702 A 1 HETATM 39 C C7N NDP . . . D 3 -3.964 -7.55 59.487 1 25.48 ? C7N NDP 702 A 1 HETATM 40 O O7N NDP . . . D 3 -3.893 -6.707 58.618 1 25.97 ? O7N NDP 702 A 1 HETATM 41 N N7N NDP . . . D 3 -4.326 -8.813 59.18 1 25.1 ? N7N NDP 702 A 1 HETATM 42 C C4N NDP . . . D 3 -3.373 -5.895 61.141 1 24.67 ? C4N NDP 702 A 1 HETATM 43 C C5N NDP . . . D 3 -3.097 -5.622 62.518 1 24.91 ? C5N NDP 702 A 1 HETATM 44 C C6N NDP . . . D 3 -3.199 -6.575 63.526 1 25.59 ? C6N NDP 702 A 1 HETATM 45 P P2B NDP . . . D 3 -4.892 -1.989 76.374 1 28.9 ? P2B NDP 702 A 1 HETATM 46 O O1X NDP . . . D 3 -5.597 -3.284 76.25 1 22.43 ? O1X NDP 702 A 1 HETATM 47 O O2X NDP . . . D 3 -3.476 -2.068 76.873 1 23.64 ? O2X NDP 702 A 1 HETATM 48 O O3X NDP . . . D 3 -5.659 -0.866 77.016 1 28.63 ? O3X NDP 702 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 48 #