data_6LEU # _model_server_result.job_id BCVVrEGKOAZ2qwErEHQvTw _model_server_result.datetime_utc '2024-11-15 06:38:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6leu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":702}' # _entry.id 6LEU # _exptl.entry_id 6LEU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LEU _cell.length_a 56.308 _cell.length_b 154.488 _cell.length_c 163.939 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LEU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 295 n n PA O2A NDP sing 296 n n PA O5B NDP sing 297 n n PA O3 NDP sing 298 n n O2A HOA2 NDP sing 299 n n O5B C5B NDP sing 300 n n C5B C4B NDP sing 301 n n C5B H51A NDP sing 302 n n C5B H52A NDP sing 303 n n C4B O4B NDP sing 304 n n C4B C3B NDP sing 305 n n C4B H4B NDP sing 306 n n O4B C1B NDP sing 307 n n C3B O3B NDP sing 308 n n C3B C2B NDP sing 309 n n C3B H3B NDP sing 310 n n O3B HO3A NDP sing 311 n n C2B O2B NDP sing 312 n n C2B C1B NDP sing 313 n n C2B H2B NDP sing 314 n n O2B P2B NDP sing 315 n n C1B N9A NDP sing 316 n n C1B H1B NDP sing 317 n n N9A C8A NDP sing 318 n y N9A C4A NDP sing 319 n y C8A N7A NDP doub 320 n y C8A H8A NDP sing 321 n n N7A C5A NDP sing 322 n y C5A C6A NDP sing 323 n y C5A C4A NDP doub 324 n y C6A N6A NDP sing 325 n n C6A N1A NDP doub 326 n y N6A H61A NDP sing 327 n n N6A H62A NDP sing 328 n n N1A C2A NDP sing 329 n y C2A N3A NDP doub 330 n y C2A H2A NDP sing 331 n n N3A C4A NDP sing 332 n y O3 PN NDP sing 333 n n PN O1N NDP doub 334 n n PN O2N NDP sing 335 n n PN O5D NDP sing 336 n n O2N H21N NDP sing 337 n n O5D C5D NDP sing 338 n n C5D C4D NDP sing 339 n n C5D H51N NDP sing 340 n n C5D H52N NDP sing 341 n n C4D O4D NDP sing 342 n n C4D C3D NDP sing 343 n n C4D H4D NDP sing 344 n n O4D C1D NDP sing 345 n n C3D O3D NDP sing 346 n n C3D C2D NDP sing 347 n n C3D H3D NDP sing 348 n n O3D HO3N NDP sing 349 n n C2D O2D NDP sing 350 n n C2D C1D NDP sing 351 n n C2D H2D NDP sing 352 n n O2D HO2N NDP sing 353 n n C1D N1N NDP sing 354 n n C1D H1D NDP sing 355 n n N1N C2N NDP sing 356 n n N1N C6N NDP sing 357 n n C2N C3N NDP doub 358 n n C2N H2N NDP sing 359 n n C3N C7N NDP sing 360 n n C3N C4N NDP sing 361 n n C7N O7N NDP doub 362 n n C7N N7N NDP sing 363 n n N7N H71N NDP sing 364 n n N7N H72N NDP sing 365 n n C4N C5N NDP sing 366 n n C4N H41N NDP sing 367 n n C4N H42N NDP sing 368 n n C5N C6N NDP doub 369 n n C5N H5N NDP sing 370 n n C6N H6N NDP sing 371 n n P2B O1X NDP doub 372 n n P2B O2X NDP sing 373 n n P2B O3X NDP sing 374 n n O2X HOP2 NDP sing 375 n n O3X HOP3 NDP sing 376 n n # _atom_sites.entry_id 6LEU _atom_sites.fract_transf_matrix[1][1] 0.017759 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006473 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0061 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UMP A 1 701 701 UMP UMP . D 3 NDP A 1 702 801 NDP NDP . E 4 E9X A 1 703 901 E9X DRG . F 2 UMP B 1 701 701 UMP UMP . G 3 NDP B 1 702 801 NDP NDP . H 4 E9X B 1 703 901 E9X DRG . I 5 HOH A 1 801 70 HOH HOH . I 5 HOH A 2 802 39 HOH HOH . I 5 HOH A 3 803 25 HOH HOH . I 5 HOH A 4 804 80 HOH HOH . I 5 HOH A 5 805 54 HOH HOH . I 5 HOH A 6 806 78 HOH HOH . I 5 HOH A 7 807 57 HOH HOH . I 5 HOH A 8 808 64 HOH HOH . I 5 HOH A 9 809 44 HOH HOH . I 5 HOH A 10 810 7 HOH HOH . I 5 HOH A 11 811 5 HOH HOH . I 5 HOH A 12 812 43 HOH HOH . I 5 HOH A 13 813 98 HOH HOH . I 5 HOH A 14 814 102 HOH HOH . I 5 HOH A 15 815 35 HOH HOH . I 5 HOH A 16 816 90 HOH HOH . I 5 HOH A 17 817 89 HOH HOH . I 5 HOH A 18 818 96 HOH HOH . I 5 HOH A 19 819 23 HOH HOH . I 5 HOH A 20 820 94 HOH HOH . I 5 HOH A 21 821 111 HOH HOH . I 5 HOH A 22 822 10 HOH HOH . I 5 HOH A 23 823 67 HOH HOH . I 5 HOH A 24 824 109 HOH HOH . I 5 HOH A 25 825 114 HOH HOH . I 5 HOH A 26 826 60 HOH HOH . I 5 HOH A 27 827 97 HOH HOH . I 5 HOH A 28 828 46 HOH HOH . I 5 HOH A 29 829 4 HOH HOH . I 5 HOH A 30 830 20 HOH HOH . I 5 HOH A 31 831 79 HOH HOH . I 5 HOH A 32 832 100 HOH HOH . I 5 HOH A 33 833 22 HOH HOH . I 5 HOH A 34 834 61 HOH HOH . I 5 HOH A 35 835 31 HOH HOH . I 5 HOH A 36 836 66 HOH HOH . I 5 HOH A 37 837 58 HOH HOH . I 5 HOH A 38 838 75 HOH HOH . I 5 HOH A 39 839 87 HOH HOH . I 5 HOH A 40 840 115 HOH HOH . I 5 HOH A 41 841 108 HOH HOH . I 5 HOH A 42 842 41 HOH HOH . I 5 HOH A 43 843 6 HOH HOH . I 5 HOH A 44 844 17 HOH HOH . I 5 HOH A 45 845 8 HOH HOH . I 5 HOH A 46 846 12 HOH HOH . I 5 HOH A 47 847 18 HOH HOH . I 5 HOH A 48 848 19 HOH HOH . I 5 HOH A 49 849 59 HOH HOH . I 5 HOH A 50 850 103 HOH HOH . I 5 HOH A 51 851 65 HOH HOH . I 5 HOH A 52 852 83 HOH HOH . I 5 HOH A 53 853 112 HOH HOH . I 5 HOH A 54 854 16 HOH HOH . I 5 HOH A 55 855 72 HOH HOH . I 5 HOH A 56 856 101 HOH HOH . I 5 HOH A 57 857 84 HOH HOH . I 5 HOH A 58 858 113 HOH HOH . I 5 HOH A 59 859 50 HOH HOH . I 5 HOH A 60 860 107 HOH HOH . I 5 HOH A 61 861 104 HOH HOH . J 5 HOH B 1 801 30 HOH HOH . J 5 HOH B 2 802 37 HOH HOH . J 5 HOH B 3 803 14 HOH HOH . J 5 HOH B 4 804 88 HOH HOH . J 5 HOH B 5 805 116 HOH HOH . J 5 HOH B 6 806 91 HOH HOH . J 5 HOH B 7 807 63 HOH HOH . J 5 HOH B 8 808 1 HOH HOH . J 5 HOH B 9 809 13 HOH HOH . J 5 HOH B 10 810 47 HOH HOH . J 5 HOH B 11 811 27 HOH HOH . J 5 HOH B 12 812 26 HOH HOH . J 5 HOH B 13 813 81 HOH HOH . J 5 HOH B 14 814 92 HOH HOH . J 5 HOH B 15 815 29 HOH HOH . J 5 HOH B 16 816 24 HOH HOH . J 5 HOH B 17 817 53 HOH HOH . J 5 HOH B 18 818 82 HOH HOH . J 5 HOH B 19 819 51 HOH HOH . J 5 HOH B 20 820 9 HOH HOH . J 5 HOH B 21 821 2 HOH HOH . J 5 HOH B 22 822 52 HOH HOH . J 5 HOH B 23 823 122 HOH HOH . J 5 HOH B 24 824 110 HOH HOH . J 5 HOH B 25 825 99 HOH HOH . J 5 HOH B 26 826 28 HOH HOH . J 5 HOH B 27 827 68 HOH HOH . J 5 HOH B 28 828 56 HOH HOH . J 5 HOH B 29 829 120 HOH HOH . J 5 HOH B 30 830 3 HOH HOH . J 5 HOH B 31 831 55 HOH HOH . J 5 HOH B 32 832 77 HOH HOH . J 5 HOH B 33 833 74 HOH HOH . J 5 HOH B 34 834 21 HOH HOH . J 5 HOH B 35 835 62 HOH HOH . J 5 HOH B 36 836 40 HOH HOH . J 5 HOH B 37 837 76 HOH HOH . J 5 HOH B 38 838 33 HOH HOH . J 5 HOH B 39 839 69 HOH HOH . J 5 HOH B 40 840 38 HOH HOH . J 5 HOH B 41 841 85 HOH HOH . J 5 HOH B 42 842 34 HOH HOH . J 5 HOH B 43 843 45 HOH HOH . J 5 HOH B 44 844 15 HOH HOH . J 5 HOH B 45 845 93 HOH HOH . J 5 HOH B 46 846 48 HOH HOH . J 5 HOH B 47 847 95 HOH HOH . J 5 HOH B 48 848 11 HOH HOH . J 5 HOH B 49 849 71 HOH HOH . J 5 HOH B 50 850 86 HOH HOH . J 5 HOH B 51 851 42 HOH HOH . J 5 HOH B 52 852 49 HOH HOH . J 5 HOH B 53 853 32 HOH HOH . J 5 HOH B 54 854 36 HOH HOH . J 5 HOH B 55 855 73 HOH HOH . J 5 HOH B 56 856 117 HOH HOH . J 5 HOH B 57 857 118 HOH HOH . J 5 HOH B 58 858 119 HOH HOH . J 5 HOH B 59 859 121 HOH HOH . J 5 HOH B 60 860 123 HOH HOH . J 5 HOH B 61 861 105 HOH HOH . J 5 HOH B 62 862 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . G 3 3.423 38.458 4.541 1 91.9 ? PA NDP 702 B 1 HETATM 2 O O1A NDP . . . G 3 4.392 38.119 5.613 1 84.83 ? O1A NDP 702 B 1 HETATM 3 O O2A NDP . . . G 3 2.035 37.974 4.661 1 84.16 ? O2A NDP 702 B 1 HETATM 4 O O5B NDP . . . G 3 3.229 40.075 4.507 1 97.67 ? O5B NDP 702 B 1 HETATM 5 C C5B NDP . . . G 3 4.402 40.867 4.304 1 112.15 ? C5B NDP 702 B 1 HETATM 6 C C4B NDP . . . G 3 4.18 42.301 4.761 1 115.76 ? C4B NDP 702 B 1 HETATM 7 O O4B NDP . . . G 3 4.111 42.429 6.231 1 119.42 ? O4B NDP 702 B 1 HETATM 8 C C3B NDP . . . G 3 5.405 43.147 4.405 1 120.87 ? C3B NDP 702 B 1 HETATM 9 O O3B NDP . . . G 3 5.501 43.465 2.99 1 110.79 ? O3B NDP 702 B 1 HETATM 10 C C2B NDP . . . G 3 5.07 44.339 5.263 1 122.74 ? C2B NDP 702 B 1 HETATM 11 O O2B NDP . . . G 3 3.8 44.902 4.862 1 117.26 ? O2B NDP 702 B 1 HETATM 12 C C1B NDP . . . G 3 4.836 43.66 6.602 1 121.06 ? C1B NDP 702 B 1 HETATM 13 N N9A NDP . . . G 3 6.123 43.476 7.383 1 120.54 ? N9A NDP 702 B 1 HETATM 14 C C8A NDP . . . G 3 7.018 42.49 7.367 1 120.18 ? C8A NDP 702 B 1 HETATM 15 N N7A NDP . . . G 3 7.99 42.776 8.233 1 113.03 ? N7A NDP 702 B 1 HETATM 16 C C5A NDP . . . G 3 7.697 43.947 8.792 1 117.3 ? C5A NDP 702 B 1 HETATM 17 C C6A NDP . . . G 3 8.328 44.678 9.715 1 112.52 ? C6A NDP 702 B 1 HETATM 18 N N6A NDP . . . G 3 9.46 44.173 10.184 1 110.5 ? N6A NDP 702 B 1 HETATM 19 N N1A NDP . . . G 3 7.848 45.857 10.147 1 111.54 ? N1A NDP 702 B 1 HETATM 20 C C2A NDP . . . G 3 6.643 46.325 9.604 1 118.16 ? C2A NDP 702 B 1 HETATM 21 N N3A NDP . . . G 3 6.002 45.543 8.645 1 126.33 ? N3A NDP 702 B 1 HETATM 22 C C4A NDP . . . G 3 6.545 44.375 8.263 1 122.87 ? C4A NDP 702 B 1 HETATM 23 O O3 NDP . . . G 3 4.098 38.089 3.029 1 76.43 ? O3 NDP 702 B 1 HETATM 24 P PN NDP . . . G 3 5.039 36.759 2.711 1 78.84 ? PN NDP 702 B 1 HETATM 25 O O1N NDP . . . G 3 5.57 37.195 1.399 1 72.91 ? O1N NDP 702 B 1 HETATM 26 O O2N NDP . . . G 3 5.702 37.157 3.99 1 72.59 ? O2N NDP 702 B 1 HETATM 27 O O5D NDP . . . G 3 3.534 36.058 2.652 1 72.6 ? O5D NDP 702 B 1 HETATM 28 C C5D NDP . . . G 3 2.764 35.843 1.462 1 69.31 ? C5D NDP 702 B 1 HETATM 29 C C4D NDP . . . G 3 2.756 34.345 1.167 1 69 ? C4D NDP 702 B 1 HETATM 30 O O4D NDP . . . G 3 2.832 33.451 2.347 1 75.7 ? O4D NDP 702 B 1 HETATM 31 C C3D NDP . . . G 3 1.418 33.987 0.514 1 67.12 ? C3D NDP 702 B 1 HETATM 32 O O3D NDP . . . G 3 1.65 33.002 -0.457 1 61.05 ? O3D NDP 702 B 1 HETATM 33 C C2D NDP . . . G 3 0.606 33.427 1.674 1 71.83 ? C2D NDP 702 B 1 HETATM 34 O O2D NDP . . . G 3 -0.537 32.65 1.253 1 71.94 ? O2D NDP 702 B 1 HETATM 35 C C1D NDP . . . G 3 1.661 32.553 2.296 1 73.92 ? C1D NDP 702 B 1 HETATM 36 N N1N NDP . . . G 3 1.292 32.011 3.635 1 73.03 ? N1N NDP 702 B 1 HETATM 37 C C2N NDP . . . G 3 1.569 30.673 3.917 1 77.99 ? C2N NDP 702 B 1 HETATM 38 C C3N NDP . . . G 3 1.285 30.068 5.15 1 78.46 ? C3N NDP 702 B 1 HETATM 39 C C7N NDP . . . G 3 1.547 28.705 5.427 1 73.08 ? C7N NDP 702 B 1 HETATM 40 O O7N NDP . . . G 3 1.285 28.238 6.531 1 72.8 ? O7N NDP 702 B 1 HETATM 41 N N7N NDP . . . G 3 2.06 27.936 4.466 1 68.74 ? N7N NDP 702 B 1 HETATM 42 C C4N NDP . . . G 3 0.704 30.828 6.172 1 79.29 ? C4N NDP 702 B 1 HETATM 43 C C5N NDP . . . G 3 0.454 32.174 5.856 1 83.33 ? C5N NDP 702 B 1 HETATM 44 C C6N NDP . . . G 3 0.728 32.776 4.628 1 77.4 ? C6N NDP 702 B 1 HETATM 45 P P2B NDP . . . G 3 3.601 46.365 4.298 1 111.93 ? P2B NDP 702 B 1 HETATM 46 O O1X NDP . . . G 3 3.419 46.039 2.86 1 90.27 ? O1X NDP 702 B 1 HETATM 47 O O2X NDP . . . G 3 2.363 46.782 4.995 1 101.49 ? O2X NDP 702 B 1 HETATM 48 O O3X NDP . . . G 3 4.837 47.123 4.618 1 94.32 ? O3X NDP 702 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #