data_6LEV # _model_server_result.job_id VmmQ0hPiHqiXjNWkwMgPTA _model_server_result.datetime_utc '2024-11-15 07:12:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lev # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 6LEV # _exptl.entry_id 6LEV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LEV _cell.length_a 57.703 _cell.length_b 155.878 _cell.length_c 164.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LEV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 277 n n PA O2A NDP sing 278 n n PA O5B NDP sing 279 n n PA O3 NDP sing 280 n n O2A HOA2 NDP sing 281 n n O5B C5B NDP sing 282 n n C5B C4B NDP sing 283 n n C5B H51A NDP sing 284 n n C5B H52A NDP sing 285 n n C4B O4B NDP sing 286 n n C4B C3B NDP sing 287 n n C4B H4B NDP sing 288 n n O4B C1B NDP sing 289 n n C3B O3B NDP sing 290 n n C3B C2B NDP sing 291 n n C3B H3B NDP sing 292 n n O3B HO3A NDP sing 293 n n C2B O2B NDP sing 294 n n C2B C1B NDP sing 295 n n C2B H2B NDP sing 296 n n O2B P2B NDP sing 297 n n C1B N9A NDP sing 298 n n C1B H1B NDP sing 299 n n N9A C8A NDP sing 300 n y N9A C4A NDP sing 301 n y C8A N7A NDP doub 302 n y C8A H8A NDP sing 303 n n N7A C5A NDP sing 304 n y C5A C6A NDP sing 305 n y C5A C4A NDP doub 306 n y C6A N6A NDP sing 307 n n C6A N1A NDP doub 308 n y N6A H61A NDP sing 309 n n N6A H62A NDP sing 310 n n N1A C2A NDP sing 311 n y C2A N3A NDP doub 312 n y C2A H2A NDP sing 313 n n N3A C4A NDP sing 314 n y O3 PN NDP sing 315 n n PN O1N NDP doub 316 n n PN O2N NDP sing 317 n n PN O5D NDP sing 318 n n O2N H21N NDP sing 319 n n O5D C5D NDP sing 320 n n C5D C4D NDP sing 321 n n C5D H51N NDP sing 322 n n C5D H52N NDP sing 323 n n C4D O4D NDP sing 324 n n C4D C3D NDP sing 325 n n C4D H4D NDP sing 326 n n O4D C1D NDP sing 327 n n C3D O3D NDP sing 328 n n C3D C2D NDP sing 329 n n C3D H3D NDP sing 330 n n O3D HO3N NDP sing 331 n n C2D O2D NDP sing 332 n n C2D C1D NDP sing 333 n n C2D H2D NDP sing 334 n n O2D HO2N NDP sing 335 n n C1D N1N NDP sing 336 n n C1D H1D NDP sing 337 n n N1N C2N NDP sing 338 n n N1N C6N NDP sing 339 n n C2N C3N NDP doub 340 n n C2N H2N NDP sing 341 n n C3N C7N NDP sing 342 n n C3N C4N NDP sing 343 n n C7N O7N NDP doub 344 n n C7N N7N NDP sing 345 n n N7N H71N NDP sing 346 n n N7N H72N NDP sing 347 n n C4N C5N NDP sing 348 n n C4N H41N NDP sing 349 n n C4N H42N NDP sing 350 n n C5N C6N NDP doub 351 n n C5N H5N NDP sing 352 n n C6N H6N NDP sing 353 n n P2B O1X NDP doub 354 n n P2B O2X NDP sing 355 n n P2B O3X NDP sing 356 n n O2X HOP2 NDP sing 357 n n O3X HOP3 NDP sing 358 n n # _atom_sites.entry_id 6LEV _atom_sites.fract_transf_matrix[1][1] 0.01733 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006415 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EA0 A 1 701 701 EA0 DRG . D 3 NDP A 1 702 801 NDP NDP . E 4 PO4 A 1 703 901 PO4 PO4 . F 4 PO4 A 1 704 901 PO4 PO4 . G 2 EA0 B 1 701 701 EA0 DRG . H 3 NDP B 1 702 801 NDP NDP . I 5 HOH A 1 801 17 HOH HOH . I 5 HOH A 2 802 51 HOH HOH . I 5 HOH A 3 803 18 HOH HOH . I 5 HOH A 4 804 19 HOH HOH . I 5 HOH A 5 805 12 HOH HOH . I 5 HOH A 6 806 5 HOH HOH . I 5 HOH A 7 807 8 HOH HOH . I 5 HOH A 8 808 31 HOH HOH . I 5 HOH A 9 809 15 HOH HOH . I 5 HOH A 10 810 32 HOH HOH . I 5 HOH A 11 811 6 HOH HOH . I 5 HOH A 12 812 29 HOH HOH . I 5 HOH A 13 813 22 HOH HOH . I 5 HOH A 14 814 9 HOH HOH . I 5 HOH A 15 815 24 HOH HOH . I 5 HOH A 16 816 35 HOH HOH . I 5 HOH A 17 817 36 HOH HOH . I 5 HOH A 18 818 21 HOH HOH . I 5 HOH A 19 819 16 HOH HOH . I 5 HOH A 20 820 56 HOH HOH . I 5 HOH A 21 821 49 HOH HOH . I 5 HOH A 22 822 47 HOH HOH . I 5 HOH A 23 823 33 HOH HOH . I 5 HOH A 24 824 2 HOH HOH . I 5 HOH A 25 825 44 HOH HOH . I 5 HOH A 26 826 46 HOH HOH . I 5 HOH A 27 827 50 HOH HOH . I 5 HOH A 28 828 38 HOH HOH . I 5 HOH A 29 829 39 HOH HOH . I 5 HOH A 30 830 54 HOH HOH . I 5 HOH A 31 831 43 HOH HOH . I 5 HOH A 32 832 52 HOH HOH . J 5 HOH B 1 801 10 HOH HOH . J 5 HOH B 2 802 13 HOH HOH . J 5 HOH B 3 803 26 HOH HOH . J 5 HOH B 4 804 4 HOH HOH . J 5 HOH B 5 805 28 HOH HOH . J 5 HOH B 6 806 1 HOH HOH . J 5 HOH B 7 807 23 HOH HOH . J 5 HOH B 8 808 37 HOH HOH . J 5 HOH B 9 809 30 HOH HOH . J 5 HOH B 10 810 25 HOH HOH . J 5 HOH B 11 811 3 HOH HOH . J 5 HOH B 12 812 34 HOH HOH . J 5 HOH B 13 813 11 HOH HOH . J 5 HOH B 14 814 27 HOH HOH . J 5 HOH B 15 815 45 HOH HOH . J 5 HOH B 16 816 20 HOH HOH . J 5 HOH B 17 817 7 HOH HOH . J 5 HOH B 18 818 48 HOH HOH . J 5 HOH B 19 819 57 HOH HOH . J 5 HOH B 20 820 14 HOH HOH . J 5 HOH B 21 821 58 HOH HOH . J 5 HOH B 22 822 59 HOH HOH . J 5 HOH B 23 823 55 HOH HOH . J 5 HOH B 24 824 40 HOH HOH . J 5 HOH B 25 825 53 HOH HOH . J 5 HOH B 26 826 41 HOH HOH . J 5 HOH B 27 827 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . D 3 6.168 -4.107 -68.693 1 62.25 ? PA NDP 702 A 1 HETATM 2 O O1A NDP . . . D 3 7.246 -3.267 -68.107 1 48.59 ? O1A NDP 702 A 1 HETATM 3 O O2A NDP . . . D 3 4.785 -4.161 -68.047 1 51.14 ? O2A NDP 702 A 1 HETATM 4 O O5B NDP . . . D 3 6.001 -3.678 -70.283 1 62.15 ? O5B NDP 702 A 1 HETATM 5 C C5B NDP . . . D 3 7.047 -2.957 -70.958 1 61.48 ? C5B NDP 702 A 1 HETATM 6 C C4B NDP . . . D 3 6.41 -2.391 -72.224 1 64.22 ? C4B NDP 702 A 1 HETATM 7 O O4B NDP . . . D 3 5.762 -1.113 -71.95 1 60.27 ? O4B NDP 702 A 1 HETATM 8 C C3B NDP . . . D 3 7.47 -2.097 -73.301 1 63.98 ? C3B NDP 702 A 1 HETATM 9 O O3B NDP . . . D 3 7.656 -3.226 -74.163 1 56.61 ? O3B NDP 702 A 1 HETATM 10 C C2B NDP . . . D 3 6.821 -0.957 -74.043 1 59.4 ? C2B NDP 702 A 1 HETATM 11 O O2B NDP . . . D 3 5.652 -1.387 -74.686 1 57.99 ? O2B NDP 702 A 1 HETATM 12 C C1B NDP . . . D 3 6.318 -0.163 -72.908 1 61.26 ? C1B NDP 702 A 1 HETATM 13 N N9A NDP . . . D 3 7.355 0.675 -72.299 1 64.13 ? N9A NDP 702 A 1 HETATM 14 C C8A NDP . . . D 3 8.056 0.533 -71.179 1 68.08 ? C8A NDP 702 A 1 HETATM 15 N N7A NDP . . . D 3 8.857 1.589 -71.065 1 66.72 ? N7A NDP 702 A 1 HETATM 16 C C5A NDP . . . D 3 8.648 2.402 -72.101 1 66.15 ? C5A NDP 702 A 1 HETATM 17 C C6A NDP . . . D 3 9.183 3.594 -72.451 1 63.21 ? C6A NDP 702 A 1 HETATM 18 N N6A NDP . . . D 3 10.101 4.157 -71.677 1 57.78 ? N6A NDP 702 A 1 HETATM 19 N N1A NDP . . . D 3 8.8 4.208 -73.56 1 69.17 ? N1A NDP 702 A 1 HETATM 20 C C2A NDP . . . D 3 7.812 3.59 -74.363 1 69.43 ? C2A NDP 702 A 1 HETATM 21 N N3A NDP . . . D 3 7.274 2.358 -74.001 1 62.48 ? N3A NDP 702 A 1 HETATM 22 C C4A NDP . . . D 3 7.713 1.806 -72.868 1 64.25 ? C4A NDP 702 A 1 HETATM 23 O O3 NDP . . . D 3 6.742 -5.611 -68.957 1 52.41 ? O3 NDP 702 A 1 HETATM 24 P PN NDP . . . D 3 7.411 -6.789 -68.011 1 58.06 ? PN NDP 702 A 1 HETATM 25 O O1N NDP . . . D 3 7.167 -7.648 -69.245 1 57.9 ? O1N NDP 702 A 1 HETATM 26 O O2N NDP . . . D 3 8.562 -5.868 -67.782 1 46.06 ? O2N NDP 702 A 1 HETATM 27 O O5D NDP . . . D 3 6.114 -6.784 -66.925 1 59.19 ? O5D NDP 702 A 1 HETATM 28 C C5D NDP . . . D 3 4.894 -7.54 -67.124 1 56.83 ? C5D NDP 702 A 1 HETATM 29 C C4D NDP . . . D 3 4.996 -8.768 -66.241 1 59.9 ? C4D NDP 702 A 1 HETATM 30 O O4D NDP . . . D 3 5.27 -8.359 -64.888 1 63.4 ? O4D NDP 702 A 1 HETATM 31 C C3D NDP . . . D 3 3.613 -9.509 -66.179 1 60.93 ? C3D NDP 702 A 1 HETATM 32 O O3D NDP . . . D 3 3.794 -10.901 -65.848 1 55.41 ? O3D NDP 702 A 1 HETATM 33 C C2D NDP . . . D 3 2.864 -8.756 -65.073 1 61.66 ? C2D NDP 702 A 1 HETATM 34 O O2D NDP . . . D 3 1.741 -9.524 -64.524 1 54.04 ? O2D NDP 702 A 1 HETATM 35 C C1D NDP . . . D 3 4.039 -8.617 -64.095 1 62.2 ? C1D NDP 702 A 1 HETATM 36 N N1N NDP . . . D 3 3.904 -7.546 -63.104 1 56.68 ? N1N NDP 702 A 1 HETATM 37 C C2N NDP . . . D 3 4.124 -7.89 -61.771 1 64.56 ? C2N NDP 702 A 1 HETATM 38 C C3N NDP . . . D 3 4.027 -6.976 -60.702 1 64.05 ? C3N NDP 702 A 1 HETATM 39 C C7N NDP . . . D 3 4.263 -7.367 -59.336 1 52.02 ? C7N NDP 702 A 1 HETATM 40 O O7N NDP . . . D 3 4.278 -6.533 -58.426 1 42 ? O7N NDP 702 A 1 HETATM 41 N N7N NDP . . . D 3 4.589 -8.65 -59.079 1 45.16 ? N7N NDP 702 A 1 HETATM 42 C C4N NDP . . . D 3 3.674 -5.636 -61.026 1 59.38 ? C4N NDP 702 A 1 HETATM 43 C C5N NDP . . . D 3 3.475 -5.343 -62.382 1 59.59 ? C5N NDP 702 A 1 HETATM 44 C C6N NDP . . . D 3 3.559 -6.268 -63.425 1 55.67 ? C6N NDP 702 A 1 HETATM 45 P P2B NDP . . . D 3 5.599 -1.719 -76.225 1 60.8 ? P2B NDP 702 A 1 HETATM 46 O O1X NDP . . . D 3 5.932 -3.154 -76.285 1 58.86 ? O1X NDP 702 A 1 HETATM 47 O O2X NDP . . . D 3 4.177 -1.479 -76.564 1 63.18 ? O2X NDP 702 A 1 HETATM 48 O O3X NDP . . . D 3 6.617 -0.796 -76.825 1 62.12 ? O3X NDP 702 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 626 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 48 #