data_6LEZ # _model_server_result.job_id EZOBYZ8YajtpNOttObrNHw _model_server_result.datetime_utc '2024-11-15 07:01:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lez # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":702}' # _entry.id 6LEZ # _exptl.entry_id 6LEZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LEZ _cell.length_a 57.703 _cell.length_b 155.878 _cell.length_c 164.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LEZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 277 n n PA O2A NDP sing 278 n n PA O5B NDP sing 279 n n PA O3 NDP sing 280 n n O2A HOA2 NDP sing 281 n n O5B C5B NDP sing 282 n n C5B C4B NDP sing 283 n n C5B H51A NDP sing 284 n n C5B H52A NDP sing 285 n n C4B O4B NDP sing 286 n n C4B C3B NDP sing 287 n n C4B H4B NDP sing 288 n n O4B C1B NDP sing 289 n n C3B O3B NDP sing 290 n n C3B C2B NDP sing 291 n n C3B H3B NDP sing 292 n n O3B HO3A NDP sing 293 n n C2B O2B NDP sing 294 n n C2B C1B NDP sing 295 n n C2B H2B NDP sing 296 n n O2B P2B NDP sing 297 n n C1B N9A NDP sing 298 n n C1B H1B NDP sing 299 n n N9A C8A NDP sing 300 n y N9A C4A NDP sing 301 n y C8A N7A NDP doub 302 n y C8A H8A NDP sing 303 n n N7A C5A NDP sing 304 n y C5A C6A NDP sing 305 n y C5A C4A NDP doub 306 n y C6A N6A NDP sing 307 n n C6A N1A NDP doub 308 n y N6A H61A NDP sing 309 n n N6A H62A NDP sing 310 n n N1A C2A NDP sing 311 n y C2A N3A NDP doub 312 n y C2A H2A NDP sing 313 n n N3A C4A NDP sing 314 n y O3 PN NDP sing 315 n n PN O1N NDP doub 316 n n PN O2N NDP sing 317 n n PN O5D NDP sing 318 n n O2N H21N NDP sing 319 n n O5D C5D NDP sing 320 n n C5D C4D NDP sing 321 n n C5D H51N NDP sing 322 n n C5D H52N NDP sing 323 n n C4D O4D NDP sing 324 n n C4D C3D NDP sing 325 n n C4D H4D NDP sing 326 n n O4D C1D NDP sing 327 n n C3D O3D NDP sing 328 n n C3D C2D NDP sing 329 n n C3D H3D NDP sing 330 n n O3D HO3N NDP sing 331 n n C2D O2D NDP sing 332 n n C2D C1D NDP sing 333 n n C2D H2D NDP sing 334 n n O2D HO2N NDP sing 335 n n C1D N1N NDP sing 336 n n C1D H1D NDP sing 337 n n N1N C2N NDP sing 338 n n N1N C6N NDP sing 339 n n C2N C3N NDP doub 340 n n C2N H2N NDP sing 341 n n C3N C7N NDP sing 342 n n C3N C4N NDP sing 343 n n C7N O7N NDP doub 344 n n C7N N7N NDP sing 345 n n N7N H71N NDP sing 346 n n N7N H72N NDP sing 347 n n C4N C5N NDP sing 348 n n C4N H41N NDP sing 349 n n C4N H42N NDP sing 350 n n C5N C6N NDP doub 351 n n C5N H5N NDP sing 352 n n C6N H6N NDP sing 353 n n P2B O1X NDP doub 354 n n P2B O2X NDP sing 355 n n P2B O3X NDP sing 356 n n O2X HOP2 NDP sing 357 n n O3X HOP3 NDP sing 358 n n # _atom_sites.entry_id 6LEZ _atom_sites.fract_transf_matrix[1][1] 0.01733 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006415 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EA0 A 1 701 701 EA0 DRG . D 3 NDP A 1 702 801 NDP NDP . E 4 PO4 A 1 703 901 PO4 PO4 . F 4 PO4 A 1 704 901 PO4 PO4 . G 2 EA0 B 1 701 701 EA0 DRG . H 3 NDP B 1 702 801 NDP NDP . I 5 HOH A 1 801 17 HOH HOH . I 5 HOH A 2 802 51 HOH HOH . I 5 HOH A 3 803 12 HOH HOH . I 5 HOH A 4 804 18 HOH HOH . I 5 HOH A 5 805 19 HOH HOH . I 5 HOH A 6 806 8 HOH HOH . I 5 HOH A 7 807 31 HOH HOH . I 5 HOH A 8 808 5 HOH HOH . I 5 HOH A 9 809 15 HOH HOH . I 5 HOH A 10 810 32 HOH HOH . I 5 HOH A 11 811 29 HOH HOH . I 5 HOH A 12 812 6 HOH HOH . I 5 HOH A 13 813 22 HOH HOH . I 5 HOH A 14 814 9 HOH HOH . I 5 HOH A 15 815 24 HOH HOH . I 5 HOH A 16 816 35 HOH HOH . I 5 HOH A 17 817 47 HOH HOH . I 5 HOH A 18 818 21 HOH HOH . I 5 HOH A 19 819 36 HOH HOH . I 5 HOH A 20 820 16 HOH HOH . I 5 HOH A 21 821 56 HOH HOH . I 5 HOH A 22 822 49 HOH HOH . I 5 HOH A 23 823 33 HOH HOH . I 5 HOH A 24 824 2 HOH HOH . I 5 HOH A 25 825 46 HOH HOH . I 5 HOH A 26 826 44 HOH HOH . I 5 HOH A 27 827 50 HOH HOH . I 5 HOH A 28 828 38 HOH HOH . I 5 HOH A 29 829 39 HOH HOH . I 5 HOH A 30 830 54 HOH HOH . I 5 HOH A 31 831 43 HOH HOH . I 5 HOH A 32 832 52 HOH HOH . J 5 HOH B 1 801 10 HOH HOH . J 5 HOH B 2 802 26 HOH HOH . J 5 HOH B 3 803 13 HOH HOH . J 5 HOH B 4 804 28 HOH HOH . J 5 HOH B 5 805 4 HOH HOH . J 5 HOH B 6 806 1 HOH HOH . J 5 HOH B 7 807 23 HOH HOH . J 5 HOH B 8 808 37 HOH HOH . J 5 HOH B 9 809 30 HOH HOH . J 5 HOH B 10 810 25 HOH HOH . J 5 HOH B 11 811 3 HOH HOH . J 5 HOH B 12 812 27 HOH HOH . J 5 HOH B 13 813 45 HOH HOH . J 5 HOH B 14 814 11 HOH HOH . J 5 HOH B 15 815 34 HOH HOH . J 5 HOH B 16 816 20 HOH HOH . J 5 HOH B 17 817 7 HOH HOH . J 5 HOH B 18 818 48 HOH HOH . J 5 HOH B 19 819 57 HOH HOH . J 5 HOH B 20 820 14 HOH HOH . J 5 HOH B 21 821 58 HOH HOH . J 5 HOH B 22 822 59 HOH HOH . J 5 HOH B 23 823 55 HOH HOH . J 5 HOH B 24 824 40 HOH HOH . J 5 HOH B 25 825 53 HOH HOH . J 5 HOH B 26 826 41 HOH HOH . J 5 HOH B 27 827 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . H 3 -5.052 37.981 -3.884 1 102.06 ? PA NDP 702 B 1 HETATM 2 O O1A NDP . . . H 3 -6.3 37.797 -4.703 1 91.42 ? O1A NDP 702 B 1 HETATM 3 O O2A NDP . . . H 3 -3.75 37.488 -4.382 1 80.07 ? O2A NDP 702 B 1 HETATM 4 O O5B NDP . . . H 3 -4.788 39.599 -3.681 1 119.97 ? O5B NDP 702 B 1 HETATM 5 C C5B NDP . . . H 3 -5.869 40.538 -3.527 1 132.23 ? C5B NDP 702 B 1 HETATM 6 C C4B NDP . . . H 3 -5.437 41.94 -3.981 1 142.27 ? C4B NDP 702 B 1 HETATM 7 O O4B NDP . . . H 3 -5.287 42.031 -5.439 1 144.94 ? O4B NDP 702 B 1 HETATM 8 C C3B NDP . . . H 3 -6.527 42.986 -3.669 1 142.44 ? C3B NDP 702 B 1 HETATM 9 O O3B NDP . . . H 3 -6.549 43.39 -2.284 1 138.2 ? O3B NDP 702 B 1 HETATM 10 C C2B NDP . . . H 3 -6.061 44.109 -4.555 1 144.66 ? C2B NDP 702 B 1 HETATM 11 O O2B NDP . . . H 3 -4.781 44.682 -4.1 1 142.77 ? O2B NDP 702 B 1 HETATM 12 C C1B NDP . . . H 3 -5.832 43.338 -5.855 1 141.7 ? C1B NDP 702 B 1 HETATM 13 N N9A NDP . . . H 3 -7.089 43.261 -6.666 1 133.56 ? N9A NDP 702 B 1 HETATM 14 C C8A NDP . . . H 3 -7.901 42.219 -6.746 1 128.13 ? C8A NDP 702 B 1 HETATM 15 N N7A NDP . . . H 3 -8.903 42.546 -7.55 1 128.32 ? N7A NDP 702 B 1 HETATM 16 C C5A NDP . . . H 3 -8.728 43.79 -7.981 1 138.5 ? C5A NDP 702 B 1 HETATM 17 C C6A NDP . . . H 3 -9.453 44.57 -8.801 1 138.24 ? C6A NDP 702 B 1 HETATM 18 N N6A NDP . . . H 3 -10.565 44.042 -9.308 1 131.05 ? N6A NDP 702 B 1 HETATM 19 N N1A NDP . . . H 3 -9.086 45.826 -9.106 1 143.84 ? N1A NDP 702 B 1 HETATM 20 C C2A NDP . . . H 3 -7.906 46.321 -8.543 1 154.41 ? C2A NDP 702 B 1 HETATM 21 N N3A NDP . . . H 3 -7.167 45.484 -7.691 1 158.55 ? N3A NDP 702 B 1 HETATM 22 C C4A NDP . . . H 3 -7.595 44.234 -7.43 1 144.28 ? C4A NDP 702 B 1 HETATM 23 O O3 NDP . . . H 3 -5.315 37.439 -2.31 1 103.91 ? O3 NDP 702 B 1 HETATM 24 P PN NDP . . . H 3 -6.437 36.293 -1.781 1 108.17 ? PN NDP 702 B 1 HETATM 25 O O1N NDP . . . H 3 -6.502 36.849 -0.405 1 97.85 ? O1N NDP 702 B 1 HETATM 26 O O2N NDP . . . H 3 -7.365 36.741 -2.866 1 87.07 ? O2N NDP 702 B 1 HETATM 27 O O5D NDP . . . H 3 -5.099 35.351 -2.054 1 110.9 ? O5D NDP 702 B 1 HETATM 28 C C5D NDP . . . H 3 -3.918 35.372 -1.191 1 108.17 ? C5D NDP 702 B 1 HETATM 29 C C4D NDP . . . H 3 -3.598 33.903 -0.913 1 100.04 ? C4D NDP 702 B 1 HETATM 30 O O4D NDP . . . H 3 -3.444 33.203 -2.163 1 98.27 ? O4D NDP 702 B 1 HETATM 31 C C3D NDP . . . H 3 -2.262 33.718 -0.153 1 88.93 ? C3D NDP 702 B 1 HETATM 32 O O3D NDP . . . H 3 -2.495 32.915 1.025 1 77.2 ? O3D NDP 702 B 1 HETATM 33 C C2D NDP . . . H 3 -1.382 32.999 -1.19 1 88.97 ? C2D NDP 702 B 1 HETATM 34 O O2D NDP . . . H 3 -0.449 32.085 -0.602 1 81.75 ? O2D NDP 702 B 1 HETATM 35 C C1D NDP . . . H 3 -2.441 32.233 -1.912 1 92.12 ? C1D NDP 702 B 1 HETATM 36 N N1N NDP . . . H 3 -2.12 31.753 -3.266 1 92.78 ? N1N NDP 702 B 1 HETATM 37 C C2N NDP . . . H 3 -2.694 30.558 -3.638 1 102.93 ? C2N NDP 702 B 1 HETATM 38 C C3N NDP . . . H 3 -2.53 29.998 -4.911 1 105.38 ? C3N NDP 702 B 1 HETATM 39 C C7N NDP . . . H 3 -3.071 28.715 -5.238 1 104.92 ? C7N NDP 702 B 1 HETATM 40 O O7N NDP . . . H 3 -2.934 28.203 -6.352 1 96.68 ? O7N NDP 702 B 1 HETATM 41 N N7N NDP . . . H 3 -3.732 28.055 -4.291 1 104.5 ? N7N NDP 702 B 1 HETATM 42 C C4N NDP . . . H 3 -1.79 30.702 -5.872 1 95.44 ? C4N NDP 702 B 1 HETATM 43 C C5N NDP . . . H 3 -1.249 31.928 -5.468 1 91.78 ? C5N NDP 702 B 1 HETATM 44 C C6N NDP . . . H 3 -1.404 32.469 -4.203 1 91.8 ? C6N NDP 702 B 1 HETATM 45 P P2B NDP . . . H 3 -4.631 45.893 -3.071 1 135.99 ? P2B NDP 702 B 1 HETATM 46 O O1X NDP . . . H 3 -4.004 45.259 -1.889 1 123.38 ? O1X NDP 702 B 1 HETATM 47 O O2X NDP . . . H 3 -3.742 46.857 -3.75 1 132.77 ? O2X NDP 702 B 1 HETATM 48 O O3X NDP . . . H 3 -6.033 46.318 -2.872 1 133.69 ? O3X NDP 702 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 48 #