data_6LFA # _model_server_result.job_id cPmAjn1FNEqh_Bc3BZBGDQ _model_server_result.datetime_utc '2025-01-10 10:18:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lfa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 6LFA # _exptl.entry_id 6LFA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.793 _cell.angle_gamma 90 _cell.entry_id 6LFA _cell.length_a 44.988 _cell.length_b 53.768 _cell.length_c 61.24 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LFA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -11.467882 0 60.156673 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 224 n n C1 C2 PGE sing 225 n n C1 H1 PGE sing 226 n n C1 H12 PGE sing 227 n n O1 HO1 PGE sing 228 n n C2 O2 PGE sing 229 n n C2 H2 PGE sing 230 n n C2 H22 PGE sing 231 n n O2 C3 PGE sing 232 n n C3 C4 PGE sing 233 n n C3 H3 PGE sing 234 n n C3 H32 PGE sing 235 n n C4 O3 PGE sing 236 n n C4 H4 PGE sing 237 n n C4 H42 PGE sing 238 n n O4 C6 PGE sing 239 n n O4 HO4 PGE sing 240 n n C6 C5 PGE sing 241 n n C6 H6 PGE sing 242 n n C6 H62 PGE sing 243 n n C5 O3 PGE sing 244 n n C5 H5 PGE sing 245 n n C5 H52 PGE sing 246 n n # _atom_sites.entry_id 6LFA _atom_sites.fract_transf_matrix[1][1] 0.022228 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004237 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018598 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016623 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE A 1 101 1 PGE PGE . D 3 HOH A 1 201 66 HOH HOH . D 3 HOH A 2 202 88 HOH HOH . D 3 HOH A 3 203 62 HOH HOH . D 3 HOH A 4 204 14 HOH HOH . D 3 HOH A 5 205 59 HOH HOH . D 3 HOH A 6 206 45 HOH HOH . D 3 HOH A 7 207 4 HOH HOH . D 3 HOH A 8 208 15 HOH HOH . D 3 HOH A 9 209 90 HOH HOH . D 3 HOH A 10 210 19 HOH HOH . D 3 HOH A 11 211 18 HOH HOH . D 3 HOH A 12 212 47 HOH HOH . D 3 HOH A 13 213 23 HOH HOH . D 3 HOH A 14 214 28 HOH HOH . D 3 HOH A 15 215 7 HOH HOH . D 3 HOH A 16 216 27 HOH HOH . D 3 HOH A 17 217 89 HOH HOH . D 3 HOH A 18 218 92 HOH HOH . E 3 HOH B 1 101 77 HOH HOH . E 3 HOH B 2 102 9 HOH HOH . E 3 HOH B 3 103 2 HOH HOH . E 3 HOH B 4 104 12 HOH HOH . E 3 HOH B 5 105 21 HOH HOH . E 3 HOH B 6 106 87 HOH HOH . E 3 HOH B 7 107 74 HOH HOH . E 3 HOH B 8 108 93 HOH HOH . E 3 HOH B 9 109 8 HOH HOH . E 3 HOH B 10 110 6 HOH HOH . E 3 HOH B 11 111 3 HOH HOH . E 3 HOH B 12 112 5 HOH HOH . E 3 HOH B 13 113 94 HOH HOH . E 3 HOH B 14 114 29 HOH HOH . E 3 HOH B 15 115 1 HOH HOH . E 3 HOH B 16 116 11 HOH HOH . E 3 HOH B 17 117 53 HOH HOH . E 3 HOH B 18 118 91 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . C 2 -4.051 -6.76 27.624 0.5 31.6 ? C1 PGE 101 A 1 HETATM 2 O O1 PGE . . . C 2 -4.214 -8.181 27.716 0.5 35.11 ? O1 PGE 101 A 1 HETATM 3 C C2 PGE . . . C 2 -4.927 -6.117 28.683 0.5 34.8 ? C2 PGE 101 A 1 HETATM 4 O O2 PGE . . . C 2 -4.681 -4.727 28.785 0.5 37.56 ? O2 PGE 101 A 1 HETATM 5 C C3 PGE . . . C 2 -5.751 -3.967 29.324 0.5 38.36 ? C3 PGE 101 A 1 HETATM 6 C C4 PGE . . . C 2 -5.721 -3.96 30.851 0.5 38.36 ? C4 PGE 101 A 1 HETATM 7 O O4 PGE . . . C 2 -7.298 -8.198 32.351 0.5 35 ? O4 PGE 101 A 1 HETATM 8 C C6 PGE . . . C 2 -7.407 -6.78 32.526 0.5 31.63 ? C6 PGE 101 A 1 HETATM 9 C C5 PGE . . . C 2 -6.531 -6.115 31.481 0.5 34.8 ? C5 PGE 101 A 1 HETATM 10 O O3 PGE . . . C 2 -6.782 -4.725 31.4 0.5 37.56 ? O3 PGE 101 A 1 HETATM 11 H H1 PGE . . . C 2 -3.01 -6.452 27.799 0.5 37.96 ? H1 PGE 101 A 1 HETATM 12 H H12 PGE . . . C 2 -4.356 -6.374 26.64 0.5 37.96 ? H12 PGE 101 A 1 HETATM 13 H HO1 PGE . . . C 2 -3.91 -8.466 28.587 0.5 42.17 ? HO1 PGE 101 A 1 HETATM 14 H H2 PGE . . . C 2 -4.73 -6.613 29.65 0.5 41.81 ? H2 PGE 101 A 1 HETATM 15 H H22 PGE . . . C 2 -5.984 -6.301 28.424 0.5 41.81 ? H22 PGE 101 A 1 HETATM 16 H H3 PGE . . . C 2 -5.697 -2.923 28.97 0.5 46.08 ? H3 PGE 101 A 1 HETATM 17 H H32 PGE . . . C 2 -6.72 -4.381 28.997 0.5 46.08 ? H32 PGE 101 A 1 HETATM 18 H H4 PGE . . . C 2 -5.786 -2.914 31.197 0.5 46.07 ? H4 PGE 101 A 1 HETATM 19 H H42 PGE . . . C 2 -4.748 -4.364 31.182 0.5 46.07 ? H42 PGE 101 A 1 HETATM 20 H HO4 PGE . . . C 2 -7.109 -8.591 33.213 0.5 42.04 ? HO4 PGE 101 A 1 HETATM 21 H H6 PGE . . . C 2 -7.068 -6.463 33.526 0.5 38 ? H6 PGE 101 A 1 HETATM 22 H H62 PGE . . . C 2 -8.444 -6.429 32.393 0.5 38 ? H62 PGE 101 A 1 HETATM 23 H H5 PGE . . . C 2 -6.723 -6.6 30.509 0.5 41.8 ? H5 PGE 101 A 1 HETATM 24 H H52 PGE . . . C 2 -5.476 -6.302 31.744 0.5 41.8 ? H52 PGE 101 A 1 # _model_server_stats.io_time_ms 141 _model_server_stats.parse_time_ms 114 _model_server_stats.create_model_time_ms 49 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #