data_6LFH # _model_server_result.job_id KExbHko3Rlsy6cxqk-Ts6g _model_server_result.datetime_utc '2024-11-22 23:24:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lfh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":207}' # _entry.id 6LFH # _exptl.entry_id 6LFH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LFH _cell.length_a 32.95 _cell.length_b 56.41 _cell.length_c 61.22 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LFH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 X CYS 6 1_555 A SG CYS 128 X CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 30 X CYS 30 1_555 A SG CYS 116 X CYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf3 A SG CYS 65 X CYS 65 1_555 A SG CYS 81 X CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf4 A SG CYS 77 X CYS 77 1_555 A SG CYS 95 X CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 A O HIS 78 X HIS 78 1_555 I NA NA . X NA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc2 A O LEU 85 X LEU 85 1_555 H NA NA . X NA 207 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc3 A O ASP 102 X ASP 102 1_555 H NA NA . X NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc4 A O PRO 103 X PRO 103 1_555 H NA NA . X NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc5 A OD1 ASN 118 X ASN 118 1_555 I NA NA . X NA 208 3_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc6 H NA NA . X NA 207 1_555 J O HOH . X HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc7 H NA NA . X NA 207 1_555 J O HOH . X HOH 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc8 H NA NA . X NA 207 1_555 J O HOH . X HOH 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc9 I NA NA . X NA 208 1_555 J O HOH . X HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc10 I NA NA . X NA 208 1_555 J O HOH . X HOH 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc11 I NA NA . X NA 208 1_555 J O HOH . X HOH 453 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6LFH _atom_sites.fract_transf_matrix[1][1] 0.030349 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017727 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016335 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL X 1 201 1 CL CL . C 2 CL X 1 202 2 CL CL . D 2 CL X 1 203 3 CL CL . E 2 CL X 1 204 4 CL CL . F 2 CL X 1 205 5 CL CL . G 2 CL X 1 206 6 CL CL . H 3 NA X 1 207 1 NA NA . I 3 NA X 1 208 2 NA NA . J 4 HOH X 1 301 7 HOH HOH . J 4 HOH X 2 302 201 HOH HOH . J 4 HOH X 3 303 125 HOH HOH . J 4 HOH X 4 304 143 HOH HOH . J 4 HOH X 5 305 45 HOH HOH . J 4 HOH X 6 306 106 HOH HOH . J 4 HOH X 7 307 95 HOH HOH . J 4 HOH X 8 308 80 HOH HOH . J 4 HOH X 9 309 190 HOH HOH . J 4 HOH X 10 310 221 HOH HOH . J 4 HOH X 11 311 132 HOH HOH . J 4 HOH X 12 312 219 HOH HOH . J 4 HOH X 13 313 85 HOH HOH . J 4 HOH X 14 314 142 HOH HOH . J 4 HOH X 15 315 179 HOH HOH . J 4 HOH X 16 316 70 HOH HOH . J 4 HOH X 17 317 57 HOH HOH . J 4 HOH X 18 318 158 HOH HOH . J 4 HOH X 19 319 67 HOH HOH . J 4 HOH X 20 320 208 HOH HOH . J 4 HOH X 21 321 36 HOH HOH . J 4 HOH X 22 322 55 HOH HOH . J 4 HOH X 23 323 97 HOH HOH . J 4 HOH X 24 324 14 HOH HOH . J 4 HOH X 25 325 25 HOH HOH . J 4 HOH X 26 326 98 HOH HOH . J 4 HOH X 27 327 104 HOH HOH . J 4 HOH X 28 328 31 HOH HOH . J 4 HOH X 29 329 59 HOH HOH . J 4 HOH X 30 330 68 HOH HOH . J 4 HOH X 31 331 129 HOH HOH . J 4 HOH X 32 332 21 HOH HOH . J 4 HOH X 33 333 39 HOH HOH . J 4 HOH X 34 334 52 HOH HOH . J 4 HOH X 35 335 41 HOH HOH . J 4 HOH X 36 336 54 HOH HOH . J 4 HOH X 37 337 96 HOH HOH . J 4 HOH X 38 338 86 HOH HOH . J 4 HOH X 39 339 121 HOH HOH . J 4 HOH X 40 340 75 HOH HOH . J 4 HOH X 41 341 139 HOH HOH . J 4 HOH X 42 342 51 HOH HOH . J 4 HOH X 43 343 8 HOH HOH . J 4 HOH X 44 344 28 HOH HOH . J 4 HOH X 45 345 137 HOH HOH . J 4 HOH X 46 346 23 HOH HOH . J 4 HOH X 47 347 33 HOH HOH . J 4 HOH X 48 348 72 HOH HOH . J 4 HOH X 49 349 83 HOH HOH . J 4 HOH X 50 350 195 HOH HOH . J 4 HOH X 51 351 6 HOH HOH . J 4 HOH X 52 352 40 HOH HOH . J 4 HOH X 53 353 15 HOH HOH . J 4 HOH X 54 354 12 HOH HOH . J 4 HOH X 55 355 130 HOH HOH . J 4 HOH X 56 356 49 HOH HOH . J 4 HOH X 57 357 44 HOH HOH . J 4 HOH X 58 358 122 HOH HOH . J 4 HOH X 59 359 88 HOH HOH . J 4 HOH X 60 360 119 HOH HOH . J 4 HOH X 61 361 24 HOH HOH . J 4 HOH X 62 362 93 HOH HOH . J 4 HOH X 63 363 38 HOH HOH . J 4 HOH X 64 364 135 HOH HOH . J 4 HOH X 65 365 66 HOH HOH . J 4 HOH X 66 366 127 HOH HOH . J 4 HOH X 67 367 220 HOH HOH . J 4 HOH X 68 368 46 HOH HOH . J 4 HOH X 69 369 18 HOH HOH . J 4 HOH X 70 370 71 HOH HOH . J 4 HOH X 71 371 91 HOH HOH . J 4 HOH X 72 372 17 HOH HOH . J 4 HOH X 73 373 90 HOH HOH . J 4 HOH X 74 374 105 HOH HOH . J 4 HOH X 75 375 84 HOH HOH . J 4 HOH X 76 376 5 HOH HOH . J 4 HOH X 77 377 107 HOH HOH . J 4 HOH X 78 378 117 HOH HOH . J 4 HOH X 79 379 187 HOH HOH . J 4 HOH X 80 380 47 HOH HOH . J 4 HOH X 81 381 101 HOH HOH . J 4 HOH X 82 382 180 HOH HOH . J 4 HOH X 83 383 62 HOH HOH . J 4 HOH X 84 384 32 HOH HOH . J 4 HOH X 85 385 178 HOH HOH . J 4 HOH X 86 386 37 HOH HOH . J 4 HOH X 87 387 69 HOH HOH . J 4 HOH X 88 388 16 HOH HOH . J 4 HOH X 89 389 20 HOH HOH . J 4 HOH X 90 390 211 HOH HOH . J 4 HOH X 91 391 65 HOH HOH . J 4 HOH X 92 392 177 HOH HOH . J 4 HOH X 93 393 79 HOH HOH . J 4 HOH X 94 394 9 HOH HOH . J 4 HOH X 95 395 200 HOH HOH . J 4 HOH X 96 396 13 HOH HOH . J 4 HOH X 97 397 29 HOH HOH . J 4 HOH X 98 398 128 HOH HOH . J 4 HOH X 99 399 82 HOH HOH . J 4 HOH X 100 400 48 HOH HOH . J 4 HOH X 101 401 148 HOH HOH . J 4 HOH X 102 402 11 HOH HOH . J 4 HOH X 103 403 133 HOH HOH . J 4 HOH X 104 404 172 HOH HOH . J 4 HOH X 105 405 73 HOH HOH . J 4 HOH X 106 406 74 HOH HOH . J 4 HOH X 107 407 92 HOH HOH . J 4 HOH X 108 408 162 HOH HOH . J 4 HOH X 109 409 108 HOH HOH . J 4 HOH X 110 410 56 HOH HOH . J 4 HOH X 111 411 141 HOH HOH . J 4 HOH X 112 412 99 HOH HOH . J 4 HOH X 113 413 185 HOH HOH . J 4 HOH X 114 414 19 HOH HOH . J 4 HOH X 115 415 168 HOH HOH . J 4 HOH X 116 416 226 HOH HOH . J 4 HOH X 117 417 53 HOH HOH . J 4 HOH X 118 418 206 HOH HOH . J 4 HOH X 119 419 210 HOH HOH . J 4 HOH X 120 420 10 HOH HOH . J 4 HOH X 121 421 22 HOH HOH . J 4 HOH X 122 422 170 HOH HOH . J 4 HOH X 123 423 174 HOH HOH . J 4 HOH X 124 424 111 HOH HOH . J 4 HOH X 125 425 217 HOH HOH . J 4 HOH X 126 426 102 HOH HOH . J 4 HOH X 127 427 63 HOH HOH . J 4 HOH X 128 428 216 HOH HOH . J 4 HOH X 129 429 34 HOH HOH . J 4 HOH X 130 430 227 HOH HOH . J 4 HOH X 131 431 204 HOH HOH . J 4 HOH X 132 432 35 HOH HOH . J 4 HOH X 133 433 81 HOH HOH . J 4 HOH X 134 434 2 HOH HOH . J 4 HOH X 135 435 43 HOH HOH . J 4 HOH X 136 436 124 HOH HOH . J 4 HOH X 137 437 191 HOH HOH . J 4 HOH X 138 438 115 HOH HOH . J 4 HOH X 139 439 103 HOH HOH . J 4 HOH X 140 440 140 HOH HOH . J 4 HOH X 141 441 212 HOH HOH . J 4 HOH X 142 442 167 HOH HOH . J 4 HOH X 143 443 109 HOH HOH . J 4 HOH X 144 444 120 HOH HOH . J 4 HOH X 145 445 3 HOH HOH . J 4 HOH X 146 446 160 HOH HOH . J 4 HOH X 147 447 186 HOH HOH . J 4 HOH X 148 448 225 HOH HOH . J 4 HOH X 149 449 112 HOH HOH . J 4 HOH X 150 450 94 HOH HOH . J 4 HOH X 151 451 193 HOH HOH . J 4 HOH X 152 452 189 HOH HOH . J 4 HOH X 153 453 89 HOH HOH . J 4 HOH X 154 454 76 HOH HOH . J 4 HOH X 155 455 207 HOH HOH . J 4 HOH X 156 456 87 HOH HOH . J 4 HOH X 157 457 188 HOH HOH . J 4 HOH X 158 458 61 HOH HOH . J 4 HOH X 159 459 60 HOH HOH . J 4 HOH X 160 460 110 HOH HOH . J 4 HOH X 161 461 136 HOH HOH . J 4 HOH X 162 462 100 HOH HOH . J 4 HOH X 163 463 215 HOH HOH . J 4 HOH X 164 464 147 HOH HOH . J 4 HOH X 165 465 214 HOH HOH . J 4 HOH X 166 466 202 HOH HOH . J 4 HOH X 167 467 134 HOH HOH . J 4 HOH X 168 468 197 HOH HOH . J 4 HOH X 169 469 199 HOH HOH . J 4 HOH X 170 470 156 HOH HOH . J 4 HOH X 171 471 30 HOH HOH . J 4 HOH X 172 472 155 HOH HOH . J 4 HOH X 173 473 126 HOH HOH . J 4 HOH X 174 474 164 HOH HOH . J 4 HOH X 175 475 203 HOH HOH . J 4 HOH X 176 476 224 HOH HOH . J 4 HOH X 177 477 138 HOH HOH . J 4 HOH X 178 478 173 HOH HOH . J 4 HOH X 179 479 116 HOH HOH . J 4 HOH X 180 480 77 HOH HOH . J 4 HOH X 181 481 209 HOH HOH . J 4 HOH X 182 482 123 HOH HOH . J 4 HOH X 183 483 118 HOH HOH . J 4 HOH X 184 484 184 HOH HOH . J 4 HOH X 185 485 58 HOH HOH . J 4 HOH X 186 486 150 HOH HOH . J 4 HOH X 187 487 165 HOH HOH . J 4 HOH X 188 488 146 HOH HOH . J 4 HOH X 189 489 169 HOH HOH . J 4 HOH X 190 490 161 HOH HOH . J 4 HOH X 191 491 78 HOH HOH . J 4 HOH X 192 492 218 HOH HOH . J 4 HOH X 193 493 222 HOH HOH . J 4 HOH X 194 494 159 HOH HOH . J 4 HOH X 195 495 181 HOH HOH . J 4 HOH X 196 496 223 HOH HOH . J 4 HOH X 197 497 194 HOH HOH . J 4 HOH X 198 498 151 HOH HOH . J 4 HOH X 199 499 175 HOH HOH . J 4 HOH X 200 500 183 HOH HOH . J 4 HOH X 201 501 50 HOH HOH . J 4 HOH X 202 502 171 HOH HOH . J 4 HOH X 203 503 176 HOH HOH . J 4 HOH X 204 504 114 HOH HOH . J 4 HOH X 205 505 166 HOH HOH . J 4 HOH X 206 506 213 HOH HOH . J 4 HOH X 207 507 64 HOH HOH . J 4 HOH X 208 508 144 HOH HOH . J 4 HOH X 209 509 196 HOH HOH . J 4 HOH X 210 510 145 HOH HOH . J 4 HOH X 211 511 149 HOH HOH . J 4 HOH X 212 512 182 HOH HOH . J 4 HOH X 213 513 163 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 4.16 _atom_site.Cartn_y 25.83 _atom_site.Cartn_z -17.653 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 207 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #