data_6LGV # _model_server_result.job_id OXizxSPoGWZ3Vz0494xXug _model_server_result.datetime_utc '2024-11-08 15:40:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lgv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6LGV # _exptl.entry_id 6LGV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LGV _cell.length_a 71.798 _cell.length_b 91.779 _cell.length_c 44.855 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LGV _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 15 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 10 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 296 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 291 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.043 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 134 n n C1 O2 CIT sing 135 n n C1 C2 CIT sing 136 n n O2 HO2 CIT sing 137 n n C2 C3 CIT sing 138 n n C2 H21 CIT sing 139 n n C2 H22 CIT sing 140 n n C3 O7 CIT sing 141 n n C3 C4 CIT sing 142 n n C3 C6 CIT sing 143 n n O7 HO7 CIT sing 144 n n C4 C5 CIT sing 145 n n C4 H41 CIT sing 146 n n C4 H42 CIT sing 147 n n C5 O3 CIT doub 148 n n C5 O4 CIT sing 149 n n O4 HO4 CIT sing 150 n n C6 O5 CIT doub 151 n n C6 O6 CIT sing 152 n n O6 HO6 CIT sing 153 n n # _atom_sites.entry_id 6LGV _atom_sites.fract_transf_matrix[1][1] 0.013928 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010896 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022294 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 401 401 CIT CIT . C 3 A6L A 1 402 501 A6L 9MO . D 3 A6L A 1 403 502 A6L 9MO . E 3 A6L A 1 404 503 A6L 9MO . F 3 A6L A 1 405 504 A6L 9MO . G 3 A6L A 1 406 505 A6L 9MO . H 4 HOH A 1 501 126 HOH HOH . H 4 HOH A 2 502 96 HOH HOH . H 4 HOH A 3 503 77 HOH HOH . H 4 HOH A 4 504 67 HOH HOH . H 4 HOH A 5 505 49 HOH HOH . H 4 HOH A 6 506 93 HOH HOH . H 4 HOH A 7 507 76 HOH HOH . H 4 HOH A 8 508 17 HOH HOH . H 4 HOH A 9 509 102 HOH HOH . H 4 HOH A 10 510 36 HOH HOH . H 4 HOH A 11 511 112 HOH HOH . H 4 HOH A 12 512 54 HOH HOH . H 4 HOH A 13 513 62 HOH HOH . H 4 HOH A 14 514 53 HOH HOH . H 4 HOH A 15 515 110 HOH HOH . H 4 HOH A 16 516 135 HOH HOH . H 4 HOH A 17 517 40 HOH HOH . H 4 HOH A 18 518 134 HOH HOH . H 4 HOH A 19 519 99 HOH HOH . H 4 HOH A 20 520 80 HOH HOH . H 4 HOH A 21 521 75 HOH HOH . H 4 HOH A 22 522 24 HOH HOH . H 4 HOH A 23 523 61 HOH HOH . H 4 HOH A 24 524 23 HOH HOH . H 4 HOH A 25 525 11 HOH HOH . H 4 HOH A 26 526 30 HOH HOH . H 4 HOH A 27 527 37 HOH HOH . H 4 HOH A 28 528 55 HOH HOH . H 4 HOH A 29 529 13 HOH HOH . H 4 HOH A 30 530 118 HOH HOH . H 4 HOH A 31 531 31 HOH HOH . H 4 HOH A 32 532 114 HOH HOH . H 4 HOH A 33 533 33 HOH HOH . H 4 HOH A 34 534 48 HOH HOH . H 4 HOH A 35 535 18 HOH HOH . H 4 HOH A 36 536 70 HOH HOH . H 4 HOH A 37 537 22 HOH HOH . H 4 HOH A 38 538 82 HOH HOH . H 4 HOH A 39 539 86 HOH HOH . H 4 HOH A 40 540 29 HOH HOH . H 4 HOH A 41 541 14 HOH HOH . H 4 HOH A 42 542 60 HOH HOH . H 4 HOH A 43 543 64 HOH HOH . H 4 HOH A 44 544 116 HOH HOH . H 4 HOH A 45 545 69 HOH HOH . H 4 HOH A 46 546 66 HOH HOH . H 4 HOH A 47 547 91 HOH HOH . H 4 HOH A 48 548 19 HOH HOH . H 4 HOH A 49 549 4 HOH HOH . H 4 HOH A 50 550 73 HOH HOH . H 4 HOH A 51 551 63 HOH HOH . H 4 HOH A 52 552 38 HOH HOH . H 4 HOH A 53 553 39 HOH HOH . H 4 HOH A 54 554 94 HOH HOH . H 4 HOH A 55 555 109 HOH HOH . H 4 HOH A 56 556 83 HOH HOH . H 4 HOH A 57 557 27 HOH HOH . H 4 HOH A 58 558 6 HOH HOH . H 4 HOH A 59 559 7 HOH HOH . H 4 HOH A 60 560 15 HOH HOH . H 4 HOH A 61 561 79 HOH HOH . H 4 HOH A 62 562 8 HOH HOH . H 4 HOH A 63 563 43 HOH HOH . H 4 HOH A 64 564 10 HOH HOH . H 4 HOH A 65 565 41 HOH HOH . H 4 HOH A 66 566 35 HOH HOH . H 4 HOH A 67 567 26 HOH HOH . H 4 HOH A 68 568 108 HOH HOH . H 4 HOH A 69 569 20 HOH HOH . H 4 HOH A 70 570 3 HOH HOH . H 4 HOH A 71 571 89 HOH HOH . H 4 HOH A 72 572 125 HOH HOH . H 4 HOH A 73 573 50 HOH HOH . H 4 HOH A 74 574 47 HOH HOH . H 4 HOH A 75 575 12 HOH HOH . H 4 HOH A 76 576 128 HOH HOH . H 4 HOH A 77 577 5 HOH HOH . H 4 HOH A 78 578 104 HOH HOH . H 4 HOH A 79 579 87 HOH HOH . H 4 HOH A 80 580 44 HOH HOH . H 4 HOH A 81 581 88 HOH HOH . H 4 HOH A 82 582 58 HOH HOH . H 4 HOH A 83 583 21 HOH HOH . H 4 HOH A 84 584 42 HOH HOH . H 4 HOH A 85 585 57 HOH HOH . H 4 HOH A 86 586 130 HOH HOH . H 4 HOH A 87 587 98 HOH HOH . H 4 HOH A 88 588 9 HOH HOH . H 4 HOH A 89 589 34 HOH HOH . H 4 HOH A 90 590 1 HOH HOH . H 4 HOH A 91 591 46 HOH HOH . H 4 HOH A 92 592 120 HOH HOH . H 4 HOH A 93 593 133 HOH HOH . H 4 HOH A 94 594 56 HOH HOH . H 4 HOH A 95 595 111 HOH HOH . H 4 HOH A 96 596 127 HOH HOH . H 4 HOH A 97 597 16 HOH HOH . H 4 HOH A 98 598 84 HOH HOH . H 4 HOH A 99 599 101 HOH HOH . H 4 HOH A 100 600 107 HOH HOH . H 4 HOH A 101 601 100 HOH HOH . H 4 HOH A 102 602 92 HOH HOH . H 4 HOH A 103 603 124 HOH HOH . H 4 HOH A 104 604 2 HOH HOH . H 4 HOH A 105 605 28 HOH HOH . H 4 HOH A 106 606 52 HOH HOH . H 4 HOH A 107 607 32 HOH HOH . H 4 HOH A 108 608 59 HOH HOH . H 4 HOH A 109 609 90 HOH HOH . H 4 HOH A 110 610 119 HOH HOH . H 4 HOH A 111 611 65 HOH HOH . H 4 HOH A 112 612 129 HOH HOH . H 4 HOH A 113 613 122 HOH HOH . H 4 HOH A 114 614 72 HOH HOH . H 4 HOH A 115 615 51 HOH HOH . H 4 HOH A 116 616 25 HOH HOH . H 4 HOH A 117 617 74 HOH HOH . H 4 HOH A 118 618 85 HOH HOH . H 4 HOH A 119 619 71 HOH HOH . H 4 HOH A 120 620 68 HOH HOH . H 4 HOH A 121 621 115 HOH HOH . H 4 HOH A 122 622 132 HOH HOH . H 4 HOH A 123 623 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . B 2 20.911 26.424 13.441 1 30.43 ? C1 CIT 401 A 1 HETATM 2 O O1 CIT . . . B 2 20.583 27.641 13.535 1 25.83 ? O1 CIT 401 A 1 HETATM 3 O O2 CIT . . . B 2 21.879 26.039 14.12 1 31.94 ? O2 CIT 401 A 1 HETATM 4 C C2 CIT . . . B 2 20.188 25.476 12.493 1 26.21 ? C2 CIT 401 A 1 HETATM 5 C C3 CIT . . . B 2 18.983 24.874 13.19 1 31.26 ? C3 CIT 401 A 1 HETATM 6 O O7 CIT . . . B 2 18.059 25.93 13.535 1 28.36 ? O7 CIT 401 A 1 HETATM 7 C C4 CIT . . . B 2 18.285 23.844 12.281 1 26.48 ? C4 CIT 401 A 1 HETATM 8 C C5 CIT . . . B 2 17.095 23.142 12.92 1 38.77 ? C5 CIT 401 A 1 HETATM 9 O O3 CIT . . . B 2 16.213 22.586 12.211 1 45.8 ? O3 CIT 401 A 1 HETATM 10 O O4 CIT . . . B 2 16.923 23.098 14.146 1 36.86 ? O4 CIT 401 A 1 HETATM 11 C C6 CIT . . . B 2 19.45 24.281 14.499 1 33.36 ? C6 CIT 401 A 1 HETATM 12 O O5 CIT . . . B 2 19.916 23.12 14.539 1 38.5 ? O5 CIT 401 A 1 HETATM 13 O O6 CIT . . . B 2 19.342 24.98 15.543 1 35.35 ? O6 CIT 401 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #