data_6LI0 # _model_server_result.job_id VAJ0B42oigHlUqb5Wug2jA _model_server_result.datetime_utc '2024-11-26 13:14:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6li0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1408}' # _entry.id 6LI0 # _exptl.entry_id 6LI0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 17 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LI0 _cell.length_a 59.97 _cell.length_b 88.36 _cell.length_c 156.28 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LI0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 12 A CYS 27 1_555 A SG CYS 25 A CYS 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 99 A CYS 114 1_555 A SG CYS 178 A CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 367 n n C10 C9 OLC doub 368 n n C10 C11 OLC sing 369 n n C9 C8 OLC sing 370 n n C17 C16 OLC sing 371 z n C11 C12 OLC sing 372 n n C8 C7 OLC sing 373 n n C24 C22 OLC sing 374 n n C24 O25 OLC sing 375 n n C16 C15 OLC sing 376 n n C12 C13 OLC sing 377 n n C7 C6 OLC sing 378 n n C15 C14 OLC sing 379 n n C13 C14 OLC sing 380 n n C6 C5 OLC sing 381 n n C5 C4 OLC sing 382 n n C4 C3 OLC sing 383 n n C3 C2 OLC sing 384 n n C2 C1 OLC sing 385 n n C21 C22 OLC sing 386 n n C21 O20 OLC sing 387 n n C1 O19 OLC doub 388 n n C1 O20 OLC sing 389 n n C22 O23 OLC sing 390 n n C18 H18 OLC sing 391 n n C18 H18A OLC sing 392 n n C18 H18B OLC sing 393 n n C10 H10 OLC sing 394 n n C9 H9 OLC sing 395 n n C17 H17 OLC sing 396 n n C17 H17A OLC sing 397 n n C11 H11 OLC sing 398 n n C11 H11A OLC sing 399 n n C8 H8 OLC sing 400 n n C8 H8A OLC sing 401 n n C24 H24 OLC sing 402 n n C24 H24A OLC sing 403 n n C16 H16 OLC sing 404 n n C16 H16A OLC sing 405 n n C12 H12 OLC sing 406 n n C12 H12A OLC sing 407 n n C7 H7 OLC sing 408 n n C7 H7A OLC sing 409 n n C15 H15 OLC sing 410 n n C15 H15A OLC sing 411 n n C13 H13 OLC sing 412 n n C13 H13A OLC sing 413 n n C6 H6 OLC sing 414 n n C6 H6A OLC sing 415 n n C14 H14 OLC sing 416 n n C14 H14A OLC sing 417 n n C5 H5 OLC sing 418 n n C5 H5A OLC sing 419 n n C4 H4 OLC sing 420 n n C4 H4A OLC sing 421 n n C3 H3 OLC sing 422 n n C3 H3A OLC sing 423 n n C2 H2 OLC sing 424 n n C2 H2A OLC sing 425 n n C21 H21 OLC sing 426 n n C21 H21A OLC sing 427 n n C22 H22 OLC sing 428 n n O25 HO25 OLC sing 429 n n O23 HO23 OLC sing 430 n n # _atom_sites.entry_id 6LI0 _atom_sites.fract_transf_matrix[1][1] 0.016675 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011317 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006399 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EN6 A 1 1401 1401 EN6 LIG . C 3 FMN A 1 1402 1402 FMN FMN . D 4 OLC A 1 1403 1601 OLC OLC . E 4 OLC A 1 1404 1701 OLC OLC . F 4 OLC A 1 1405 1801 OLC OLC . G 4 OLC A 1 1406 2401 OLC OLC . H 4 OLC A 1 1407 2601 OLC OLC . I 4 OLC A 1 1408 2701 OLC OLC . J 4 OLC A 1 1409 2801 OLC OLC . K 5 PEG A 1 1410 3501 PEG PEG . L 4 OLC A 1 1411 3801 OLC OLC . M 4 OLC A 1 1412 3901 OLC OLC . N 4 OLC A 1 1413 4001 OLC OLC . O 6 FLC A 1 1414 4101 FLC FLC . P 4 OLC A 1 1415 4201 OLC OLC . Q 4 OLC A 1 1416 4401 OLC OLC . R 4 OLC A 1 1417 4501 OLC OLC . S 4 OLC A 1 1418 4701 OLC OLC . T 4 OLC A 1 1419 4801 OLC OLC . U 4 OLC A 1 1420 4901 OLC OLC . V 4 OLC A 1 1421 5001 OLC OLC . W 5 PEG A 1 1422 1 PEG PEG . X 5 PEG A 1 1423 2 PEG PEG . Y 5 PEG A 1 1424 3 PEG PEG . Z 5 PEG A 1 1425 4 PEG PEG . AA 5 PEG A 1 1426 5 PEG PEG . BA 5 PEG A 1 1427 6 PEG PEG . CA 5 PEG A 1 1428 7 PEG PEG . DA 7 HOH A 1 1501 13 HOH HOH . DA 7 HOH A 2 1502 2 HOH HOH . DA 7 HOH A 3 1503 9 HOH HOH . DA 7 HOH A 4 1504 12 HOH HOH . DA 7 HOH A 5 1505 1 HOH HOH . DA 7 HOH A 6 1506 6 HOH HOH . DA 7 HOH A 7 1507 22 HOH HOH . DA 7 HOH A 8 1508 5 HOH HOH . DA 7 HOH A 9 1509 3 HOH HOH . DA 7 HOH A 10 1510 8 HOH HOH . DA 7 HOH A 11 1511 7 HOH HOH . DA 7 HOH A 12 1512 24 HOH HOH . DA 7 HOH A 13 1513 26 HOH HOH . DA 7 HOH A 14 1514 15 HOH HOH . DA 7 HOH A 15 1515 4 HOH HOH . DA 7 HOH A 16 1516 16 HOH HOH . DA 7 HOH A 17 1517 32 HOH HOH . DA 7 HOH A 18 1518 23 HOH HOH . DA 7 HOH A 19 1519 25 HOH HOH . DA 7 HOH A 20 1520 29 HOH HOH . DA 7 HOH A 21 1521 28 HOH HOH . DA 7 HOH A 22 1522 10 HOH HOH . DA 7 HOH A 23 1523 30 HOH HOH . DA 7 HOH A 24 1524 18 HOH HOH . DA 7 HOH A 25 1525 11 HOH HOH . DA 7 HOH A 26 1526 17 HOH HOH . DA 7 HOH A 27 1527 19 HOH HOH . DA 7 HOH A 28 1528 14 HOH HOH . DA 7 HOH A 29 1529 31 HOH HOH . DA 7 HOH A 30 1530 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C24 OLC . . . I 4 20.537 76.553 64.24 1 102 ? C24 OLC 1408 A 1 HETATM 2 C C5 OLC . . . I 4 21.151 77.463 73.112 1 105.17 ? C5 OLC 1408 A 1 HETATM 3 C C4 OLC . . . I 4 20.748 77.366 71.638 1 120.91 ? C4 OLC 1408 A 1 HETATM 4 C C3 OLC . . . I 4 19.906 76.123 71.396 1 103.99 ? C3 OLC 1408 A 1 HETATM 5 C C2 OLC . . . I 4 19.107 76.181 70.101 1 109.43 ? C2 OLC 1408 A 1 HETATM 6 C C21 OLC . . . I 4 20.407 75.573 66.541 1 108.11 ? C21 OLC 1408 A 1 HETATM 7 C C1 OLC . . . I 4 20.002 76.061 68.913 1 106.2 ? C1 OLC 1408 A 1 HETATM 8 C C22 OLC . . . I 4 19.633 75.866 65.281 1 113.4 ? C22 OLC 1408 A 1 HETATM 9 O O19 OLC . . . I 4 21.14 76.507 69.002 1 122.67 ? O19 OLC 1408 A 1 HETATM 10 O O25 OLC . . . I 4 20.935 75.601 63.217 1 99.79 ? O25 OLC 1408 A 1 HETATM 11 O O23 OLC . . . I 4 19.112 74.625 64.808 1 113.57 ? O23 OLC 1408 A 1 HETATM 12 O O20 OLC . . . I 4 19.513 75.45 67.658 1 94.18 ? O20 OLC 1408 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #