data_6LKL
#
_model_server_result.job_id            l6qeCVK5M_kDAlAlIRglGA 
_model_server_result.datetime_utc      '2024-11-19 15:41:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6lkl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    6LKL 
#
_exptl.entry_id    6LKL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              104.061 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MALONIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.74 
_cell.angle_gamma         90 
_cell.entry_id            6LKL 
_cell.length_a            71.375 
_cell.length_b            85.932 
_cell.length_c            71.515 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LKL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C3 H4 O4' 
_chem_comp.formula_weight    104.061 
_chem_comp.id                MLA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MALONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'DICARBOXYLIC ACID C3;PROPANEDIOLIC ACID;METHANEDICARBOXYLIC ACID' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1A MLA sing 224 n n 
C1 O1B MLA doub 225 n n 
C1 C2 MLA sing 226 n n 
O1A H1A MLA sing 227 n n 
C2 C3 MLA sing 228 n n 
C2 HC21 MLA sing 229 n n 
C2 HC22 MLA sing 230 n n 
C3 O3A MLA doub 231 n n 
C3 O3B MLA sing 232 n n 
O3B H3B MLA sing 233 n n 
#
_atom_sites.entry_id                     6LKL 
_atom_sites.fract_transf_matrix[1][1]    0.014011 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001657 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011637 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01408 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MLA A 1 401 1 MLA MLA . 
D 2 MLA B 1 401 2 MLA MLA . 
E 3 HOH A 1 501 115 HOH HOH . 
E 3 HOH A 2 502 40 HOH HOH . 
E 3 HOH A 3 503 82 HOH HOH . 
E 3 HOH A 4 504 103 HOH HOH . 
E 3 HOH A 5 505 61 HOH HOH . 
E 3 HOH A 6 506 135 HOH HOH . 
E 3 HOH A 7 507 64 HOH HOH . 
E 3 HOH A 8 508 145 HOH HOH . 
E 3 HOH A 9 509 138 HOH HOH . 
E 3 HOH A 10 510 119 HOH HOH . 
E 3 HOH A 11 511 78 HOH HOH . 
E 3 HOH A 12 512 23 HOH HOH . 
E 3 HOH A 13 513 153 HOH HOH . 
E 3 HOH A 14 514 4 HOH HOH . 
E 3 HOH A 15 515 105 HOH HOH . 
E 3 HOH A 16 516 128 HOH HOH . 
E 3 HOH A 17 517 50 HOH HOH . 
E 3 HOH A 18 518 114 HOH HOH . 
E 3 HOH A 19 519 9 HOH HOH . 
E 3 HOH A 20 520 143 HOH HOH . 
E 3 HOH A 21 521 58 HOH HOH . 
E 3 HOH A 22 522 41 HOH HOH . 
E 3 HOH A 23 523 126 HOH HOH . 
E 3 HOH A 24 524 130 HOH HOH . 
E 3 HOH A 25 525 67 HOH HOH . 
E 3 HOH A 26 526 85 HOH HOH . 
E 3 HOH A 27 527 70 HOH HOH . 
E 3 HOH A 28 528 167 HOH HOH . 
E 3 HOH A 29 529 57 HOH HOH . 
E 3 HOH A 30 530 92 HOH HOH . 
E 3 HOH A 31 531 117 HOH HOH . 
E 3 HOH A 32 532 147 HOH HOH . 
E 3 HOH A 33 533 24 HOH HOH . 
E 3 HOH A 34 534 189 HOH HOH . 
E 3 HOH A 35 535 63 HOH HOH . 
E 3 HOH A 36 536 6 HOH HOH . 
E 3 HOH A 37 537 47 HOH HOH . 
E 3 HOH A 38 538 72 HOH HOH . 
E 3 HOH A 39 539 141 HOH HOH . 
E 3 HOH A 40 540 31 HOH HOH . 
E 3 HOH A 41 541 21 HOH HOH . 
E 3 HOH A 42 542 15 HOH HOH . 
E 3 HOH A 43 543 16 HOH HOH . 
E 3 HOH A 44 544 96 HOH HOH . 
E 3 HOH A 45 545 120 HOH HOH . 
E 3 HOH A 46 546 86 HOH HOH . 
E 3 HOH A 47 547 38 HOH HOH . 
E 3 HOH A 48 548 129 HOH HOH . 
E 3 HOH A 49 549 28 HOH HOH . 
E 3 HOH A 50 550 17 HOH HOH . 
E 3 HOH A 51 551 191 HOH HOH . 
E 3 HOH A 52 552 132 HOH HOH . 
E 3 HOH A 53 553 13 HOH HOH . 
E 3 HOH A 54 554 124 HOH HOH . 
E 3 HOH A 55 555 195 HOH HOH . 
E 3 HOH A 56 556 157 HOH HOH . 
E 3 HOH A 57 557 134 HOH HOH . 
E 3 HOH A 58 558 68 HOH HOH . 
E 3 HOH A 59 559 2 HOH HOH . 
E 3 HOH A 60 560 1 HOH HOH . 
E 3 HOH A 61 561 156 HOH HOH . 
E 3 HOH A 62 562 183 HOH HOH . 
E 3 HOH A 63 563 19 HOH HOH . 
E 3 HOH A 64 564 154 HOH HOH . 
E 3 HOH A 65 565 76 HOH HOH . 
E 3 HOH A 66 566 65 HOH HOH . 
E 3 HOH A 67 567 127 HOH HOH . 
E 3 HOH A 68 568 139 HOH HOH . 
E 3 HOH A 69 569 43 HOH HOH . 
E 3 HOH A 70 570 5 HOH HOH . 
E 3 HOH A 71 571 164 HOH HOH . 
E 3 HOH A 72 572 118 HOH HOH . 
E 3 HOH A 73 573 54 HOH HOH . 
E 3 HOH A 74 574 18 HOH HOH . 
E 3 HOH A 75 575 60 HOH HOH . 
E 3 HOH A 76 576 80 HOH HOH . 
E 3 HOH A 77 577 48 HOH HOH . 
E 3 HOH A 78 578 155 HOH HOH . 
E 3 HOH A 79 579 11 HOH HOH . 
E 3 HOH A 80 580 37 HOH HOH . 
E 3 HOH A 81 581 146 HOH HOH . 
E 3 HOH A 82 582 187 HOH HOH . 
E 3 HOH A 83 583 161 HOH HOH . 
E 3 HOH A 84 584 62 HOH HOH . 
E 3 HOH A 85 585 104 HOH HOH . 
E 3 HOH A 86 586 193 HOH HOH . 
E 3 HOH A 87 587 89 HOH HOH . 
E 3 HOH A 88 588 192 HOH HOH . 
E 3 HOH A 89 589 90 HOH HOH . 
E 3 HOH A 90 590 12 HOH HOH . 
E 3 HOH A 91 591 194 HOH HOH . 
E 3 HOH A 92 592 184 HOH HOH . 
E 3 HOH A 93 593 182 HOH HOH . 
E 3 HOH A 94 594 177 HOH HOH . 
E 3 HOH A 95 595 171 HOH HOH . 
E 3 HOH A 96 596 27 HOH HOH . 
E 3 HOH A 97 597 163 HOH HOH . 
E 3 HOH A 98 598 3 HOH HOH . 
E 3 HOH A 99 599 110 HOH HOH . 
E 3 HOH A 100 600 160 HOH HOH . 
E 3 HOH A 101 601 176 HOH HOH . 
E 3 HOH A 102 602 107 HOH HOH . 
F 3 HOH B 1 501 106 HOH HOH . 
F 3 HOH B 2 502 108 HOH HOH . 
F 3 HOH B 3 503 181 HOH HOH . 
F 3 HOH B 4 504 53 HOH HOH . 
F 3 HOH B 5 505 94 HOH HOH . 
F 3 HOH B 6 506 101 HOH HOH . 
F 3 HOH B 7 507 79 HOH HOH . 
F 3 HOH B 8 508 112 HOH HOH . 
F 3 HOH B 9 509 71 HOH HOH . 
F 3 HOH B 10 510 113 HOH HOH . 
F 3 HOH B 11 511 136 HOH HOH . 
F 3 HOH B 12 512 84 HOH HOH . 
F 3 HOH B 13 513 33 HOH HOH . 
F 3 HOH B 14 514 77 HOH HOH . 
F 3 HOH B 15 515 148 HOH HOH . 
F 3 HOH B 16 516 39 HOH HOH . 
F 3 HOH B 17 517 99 HOH HOH . 
F 3 HOH B 18 518 35 HOH HOH . 
F 3 HOH B 19 519 91 HOH HOH . 
F 3 HOH B 20 520 159 HOH HOH . 
F 3 HOH B 21 521 88 HOH HOH . 
F 3 HOH B 22 522 59 HOH HOH . 
F 3 HOH B 23 523 26 HOH HOH . 
F 3 HOH B 24 524 137 HOH HOH . 
F 3 HOH B 25 525 100 HOH HOH . 
F 3 HOH B 26 526 52 HOH HOH . 
F 3 HOH B 27 527 51 HOH HOH . 
F 3 HOH B 28 528 97 HOH HOH . 
F 3 HOH B 29 529 142 HOH HOH . 
F 3 HOH B 30 530 151 HOH HOH . 
F 3 HOH B 31 531 44 HOH HOH . 
F 3 HOH B 32 532 188 HOH HOH . 
F 3 HOH B 33 533 102 HOH HOH . 
F 3 HOH B 34 534 69 HOH HOH . 
F 3 HOH B 35 535 178 HOH HOH . 
F 3 HOH B 36 536 42 HOH HOH . 
F 3 HOH B 37 537 56 HOH HOH . 
F 3 HOH B 38 538 83 HOH HOH . 
F 3 HOH B 39 539 7 HOH HOH . 
F 3 HOH B 40 540 186 HOH HOH . 
F 3 HOH B 41 541 81 HOH HOH . 
F 3 HOH B 42 542 66 HOH HOH . 
F 3 HOH B 43 543 140 HOH HOH . 
F 3 HOH B 44 544 20 HOH HOH . 
F 3 HOH B 45 545 22 HOH HOH . 
F 3 HOH B 46 546 131 HOH HOH . 
F 3 HOH B 47 547 87 HOH HOH . 
F 3 HOH B 48 548 162 HOH HOH . 
F 3 HOH B 49 549 125 HOH HOH . 
F 3 HOH B 50 550 122 HOH HOH . 
F 3 HOH B 51 551 165 HOH HOH . 
F 3 HOH B 52 552 149 HOH HOH . 
F 3 HOH B 53 553 98 HOH HOH . 
F 3 HOH B 54 554 8 HOH HOH . 
F 3 HOH B 55 555 133 HOH HOH . 
F 3 HOH B 56 556 93 HOH HOH . 
F 3 HOH B 57 557 36 HOH HOH . 
F 3 HOH B 58 558 29 HOH HOH . 
F 3 HOH B 59 559 75 HOH HOH . 
F 3 HOH B 60 560 73 HOH HOH . 
F 3 HOH B 61 561 74 HOH HOH . 
F 3 HOH B 62 562 144 HOH HOH . 
F 3 HOH B 63 563 46 HOH HOH . 
F 3 HOH B 64 564 180 HOH HOH . 
F 3 HOH B 65 565 179 HOH HOH . 
F 3 HOH B 66 566 95 HOH HOH . 
F 3 HOH B 67 567 49 HOH HOH . 
F 3 HOH B 68 568 45 HOH HOH . 
F 3 HOH B 69 569 109 HOH HOH . 
F 3 HOH B 70 570 55 HOH HOH . 
F 3 HOH B 71 571 174 HOH HOH . 
F 3 HOH B 72 572 190 HOH HOH . 
F 3 HOH B 73 573 25 HOH HOH . 
F 3 HOH B 74 574 10 HOH HOH . 
F 3 HOH B 75 575 34 HOH HOH . 
F 3 HOH B 76 576 14 HOH HOH . 
F 3 HOH B 77 577 185 HOH HOH . 
F 3 HOH B 78 578 173 HOH HOH . 
F 3 HOH B 79 579 168 HOH HOH . 
F 3 HOH B 80 580 111 HOH HOH . 
F 3 HOH B 81 581 30 HOH HOH . 
F 3 HOH B 82 582 32 HOH HOH . 
F 3 HOH B 83 583 152 HOH HOH . 
F 3 HOH B 84 584 123 HOH HOH . 
F 3 HOH B 85 585 175 HOH HOH . 
F 3 HOH B 86 586 170 HOH HOH . 
F 3 HOH B 87 587 150 HOH HOH . 
F 3 HOH B 88 588 158 HOH HOH . 
F 3 HOH B 89 589 121 HOH HOH . 
F 3 HOH B 90 590 169 HOH HOH . 
F 3 HOH B 91 591 172 HOH HOH . 
F 3 HOH B 92 592 116 HOH HOH . 
F 3 HOH B 93 593 166 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MLA . . . C 2 25.411 -12.474 22.021 1 33.95 ? C1 MLA 401 A 1 
HETATM 2 O O1A MLA . . . C 2 24.78 -12.202 23.074 1 28.77 ? O1A MLA 401 A 1 
HETATM 3 O O1B MLA . . . C 2 26.601 -12.881 22.085 1 31.38 ? O1B MLA 401 A 1 
HETATM 4 C C2 MLA . . . C 2 24.733 -12.304 20.665 1 29.03 ? C2 MLA 401 A 1 
HETATM 5 C C3 MLA . . . C 2 25.266 -11.04 19.996 1 27.67 ? C3 MLA 401 A 1 
HETATM 6 O O3A MLA . . . C 2 25.236 -10.932 18.741 1 28.43 ? O3A MLA 401 A 1 
HETATM 7 O O3B MLA . . . C 2 25.733 -10.108 20.704 1 28.29 ? O3B MLA 401 A 1 
HETATM 8 H HC21 MLA . . . C 2 23.774 -12.227 20.788 1 34.88 ? HC21 MLA 401 A 1 
HETATM 9 H HC22 MLA . . . C 2 24.928 -13.073 20.106 1 34.88 ? HC22 MLA 401 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           364 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           9 
#