data_6LM0 # _model_server_result.job_id y1UU19CpJJwKv2iVWUo8xA _model_server_result.datetime_utc '2024-11-23 06:37:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lm0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":307}' # _entry.id 6LM0 # _exptl.entry_id 6LM0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 198.388 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TETRADECANE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LM0 _cell.length_a 64.49 _cell.length_b 107.57 _cell.length_c 224.5 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LM0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 N N N ? 5 O N N ? 5 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 211 A LYS 204 1_555 D C15 RET . A RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale2 B NZ LYS 211 B LYS 204 1_555 K C15 RET . B RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale3 C NZ LYS 211 C LYS 204 1_555 P C15 RET . C RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? # _chem_comp.formula 'C14 H30' _chem_comp.formula_weight 198.388 _chem_comp.id C14 _chem_comp.mon_nstd_flag . _chem_comp.name TETRADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 C14 sing 70 n n C01 H011 C14 sing 71 n n C01 H012 C14 sing 72 n n C01 H013 C14 sing 73 n n C02 C03 C14 sing 74 n n C02 H021 C14 sing 75 n n C02 H022 C14 sing 76 n n C03 C04 C14 sing 77 n n C03 H031 C14 sing 78 n n C03 H032 C14 sing 79 n n C04 C05 C14 sing 80 n n C04 H041 C14 sing 81 n n C04 H042 C14 sing 82 n n C05 C06 C14 sing 83 n n C05 H051 C14 sing 84 n n C05 H052 C14 sing 85 n n C06 C07 C14 sing 86 n n C06 H061 C14 sing 87 n n C06 H062 C14 sing 88 n n C07 C08 C14 sing 89 n n C07 H071 C14 sing 90 n n C07 H072 C14 sing 91 n n C08 C09 C14 sing 92 n n C08 H081 C14 sing 93 n n C08 H082 C14 sing 94 n n C09 C10 C14 sing 95 n n C09 H091 C14 sing 96 n n C09 H092 C14 sing 97 n n C10 C11 C14 sing 98 n n C10 H101 C14 sing 99 n n C10 H102 C14 sing 100 n n C11 C12 C14 sing 101 n n C11 H111 C14 sing 102 n n C11 H112 C14 sing 103 n n C12 C13 C14 sing 104 n n C12 H121 C14 sing 105 n n C12 H122 C14 sing 106 n n C13 C14 C14 sing 107 n n C13 H131 C14 sing 108 n n C13 H132 C14 sing 109 n n C14 H141 C14 sing 110 n n C14 H142 C14 sing 111 n n C14 H143 C14 sing 112 n n # _atom_sites.entry_id 6LM0 _atom_sites.fract_transf_matrix[1][1] 0.015506 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009296 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004454 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 RET A 1 301 301 RET RET . E 3 HEX A 1 302 1 HEX HEX . F 3 HEX A 1 303 2 HEX HEX . G 4 OCT A 1 304 1 OCT OCT . H 4 OCT A 1 305 2 OCT OCT . I 4 OCT A 1 306 3 OCT OCT . J 5 C14 A 1 307 1 C14 C14 . K 2 RET B 1 301 301 RET RET . L 3 HEX B 1 302 3 HEX HEX . M 6 D10 B 1 303 1 D10 D10 . N 5 C14 B 1 304 2 C14 C14 . O 5 C14 B 1 305 3 C14 C14 . P 2 RET C 1 301 301 RET RET . Q 4 OCT C 1 302 4 OCT OCT . R 6 D10 C 1 303 2 D10 D10 . S 5 C14 C 1 304 4 C14 C14 . T 7 HOH A 1 401 515 HOH HOH . T 7 HOH A 2 402 406 HOH HOH . T 7 HOH A 3 403 401 HOH HOH . T 7 HOH A 4 404 402 HOH HOH . T 7 HOH A 5 405 421 HOH HOH . T 7 HOH A 6 406 407 HOH HOH . T 7 HOH A 7 407 501 HOH HOH . T 7 HOH A 8 408 526 HOH HOH . T 7 HOH A 9 409 514 HOH HOH . T 7 HOH A 10 410 502 HOH HOH . T 7 HOH A 11 411 405 HOH HOH . T 7 HOH A 12 412 422 HOH HOH . T 7 HOH A 13 413 525 HOH HOH . T 7 HOH A 14 414 404 HOH HOH . T 7 HOH A 15 415 522 HOH HOH . T 7 HOH A 16 416 521 HOH HOH . T 7 HOH A 17 417 511 HOH HOH . T 7 HOH A 18 418 527 HOH HOH . U 7 HOH B 1 401 407 HOH HOH . U 7 HOH B 2 402 405 HOH HOH . U 7 HOH B 3 403 515 HOH HOH . U 7 HOH B 4 404 402 HOH HOH . U 7 HOH B 5 405 517 HOH HOH . U 7 HOH B 6 406 404 HOH HOH . U 7 HOH B 7 407 401 HOH HOH . U 7 HOH B 8 408 502 HOH HOH . U 7 HOH B 9 409 421 HOH HOH . U 7 HOH B 10 410 406 HOH HOH . U 7 HOH B 11 411 516 HOH HOH . U 7 HOH B 12 412 501 HOH HOH . U 7 HOH B 13 413 518 HOH HOH . U 7 HOH B 14 414 511 HOH HOH . V 7 HOH C 1 401 402 HOH HOH . V 7 HOH C 2 402 414 HOH HOH . V 7 HOH C 3 403 505 HOH HOH . V 7 HOH C 4 404 416 HOH HOH . V 7 HOH C 5 405 417 HOH HOH . V 7 HOH C 6 406 406 HOH HOH . V 7 HOH C 7 407 404 HOH HOH . V 7 HOH C 8 408 510 HOH HOH . V 7 HOH C 9 409 522 HOH HOH . V 7 HOH C 10 410 502 HOH HOH . V 7 HOH C 11 411 407 HOH HOH . V 7 HOH C 12 412 405 HOH HOH . V 7 HOH C 13 413 413 HOH HOH . V 7 HOH C 14 414 421 HOH HOH . V 7 HOH C 15 415 501 HOH HOH . V 7 HOH C 16 416 523 HOH HOH . V 7 HOH C 17 417 411 HOH HOH . V 7 HOH C 18 418 422 HOH HOH . V 7 HOH C 19 419 511 HOH HOH . V 7 HOH C 20 420 418 HOH HOH . V 7 HOH C 21 421 401 HOH HOH . V 7 HOH C 22 422 523 HOH HOH . V 7 HOH C 23 423 521 HOH HOH . V 7 HOH C 24 424 413 HOH HOH . V 7 HOH C 25 425 524 HOH HOH . V 7 HOH C 26 426 515 HOH HOH . V 7 HOH C 27 427 411 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 C14 . . . J 5 22.215 66.938 98.78 1 43.88 ? C01 C14 307 A 1 HETATM 2 C C02 C14 . . . J 5 22.08 66.192 100.107 1 43.67 ? C02 C14 307 A 1 HETATM 3 C C03 C14 . . . J 5 21.459 64.821 99.853 1 37.95 ? C03 C14 307 A 1 HETATM 4 C C04 C14 . . . J 5 22.277 64.096 98.787 1 42.62 ? C04 C14 307 A 1 HETATM 5 C C05 C14 . . . J 5 23.543 63.515 99.413 1 45.89 ? C05 C14 307 A 1 HETATM 6 C C06 C14 . . . J 5 23.512 61.991 99.317 1 39.46 ? C06 C14 307 A 1 HETATM 7 C C07 C14 . . . J 5 24.119 61.41 100.59 1 37.55 ? C07 C14 307 A 1 HETATM 8 C C08 C14 . . . J 5 23.752 59.936 100.729 1 41.09 ? C08 C14 307 A 1 HETATM 9 C C09 C14 . . . J 5 24.119 59.491 102.143 1 38.38 ? C09 C14 307 A 1 HETATM 10 C C10 C14 . . . J 5 24.726 58.092 102.108 1 36.85 ? C10 C14 307 A 1 HETATM 11 C C11 C14 . . . J 5 24.856 57.587 103.543 1 39.66 ? C11 C14 307 A 1 HETATM 12 C C12 C14 . . . J 5 25.48 56.195 103.556 1 36.64 ? C12 C14 307 A 1 HETATM 13 C C13 C14 . . . J 5 25.196 55.546 104.909 1 35.4 ? C13 C14 307 A 1 HETATM 14 C C14 C14 . . . J 5 26.38 54.679 105.327 1 34.29 ? C14 C14 307 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #