data_6LMQ # _model_server_result.job_id N07c1TCkIh_BpqNWzsROag _model_server_result.datetime_utc '2025-04-11 21:12:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lmq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 6LMQ # _exptl.entry_id 6LMQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 566.708 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-[2-(3,4-dihydro-2H-1,4-benzoxazin-6-yl)-4-(3,4-dimethylphenyl)-3,6-dimethyl-5-(methylsulfonylamino)phenyl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6LMQ _cell.length_a 71.885 _cell.length_b 71.885 _cell.length_c 65.52 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LMQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_554 -x,-x+y,-z-2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -43.68 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 18 A ASP 64 1_555 A N CAF 19 A CAF 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C CAF 19 A CAF 65 1_555 A N THR 20 A THR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale3 A C ALA 83 A ALA 129 1_555 A N CAF 84 A CAF 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale4 A C CAF 84 A CAF 130 1_555 A N TRP 85 A TRP 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? # _chem_comp.formula 'C31 H38 N2 O6 S' _chem_comp.formula_weight 566.708 _chem_comp.id 940 _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-[2-(3,4-dihydro-2H-1,4-benzoxazin-6-yl)-4-(3,4-dimethylphenyl)-3,6-dimethyl-5-(methylsulfonylamino)phenyl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 N1 940 sing 1 n n C18 C17 940 sing 2 n n N1 C15 940 sing 3 n n O4 C27 940 doub 4 n n O3 C27 940 sing 5 n n C8 C7 940 sing 6 n n C17 O1 940 sing 7 n n C27 C22 940 sing 8 n n C15 C14 940 doub 9 n y C15 C16 940 sing 10 n y C14 C13 940 sing 11 n y C6 C7 940 doub 12 n y C6 C5 940 sing 13 n y C7 C2 940 sing 14 n y O1 C16 940 sing 15 n n C16 C19 940 doub 16 n y C22 C21 940 sing 17 n n C22 O2 940 sing 18 n n C13 C12 940 sing 19 n n C13 C20 940 doub 20 n y C21 C12 940 doub 21 n y C21 C28 940 sing 22 n y C12 C10 940 sing 23 n y C29 C28 940 sing 24 n n C28 C30 940 doub 25 n y C10 C11 940 sing 26 n n C10 C9 940 doub 27 n y C30 C9 940 sing 28 n y C30 N2 940 sing 29 n n C9 C5 940 sing 30 n n N2 S 940 sing 31 n n C5 C4 940 doub 32 n y O2 C23 940 sing 33 n n C2 C1 940 sing 34 n n C2 C3 940 doub 35 n y C19 C20 940 sing 36 n y C26 C23 940 sing 37 n n O5 S 940 doub 38 n n C4 C3 940 sing 39 n y S C31 940 sing 40 n n S O6 940 doub 41 n n C23 C25 940 sing 42 n n C23 C24 940 sing 43 n n C31 H1 940 sing 44 n n C31 H2 940 sing 45 n n C31 H3 940 sing 46 n n N2 H4 940 sing 47 n n C29 H5 940 sing 48 n n C29 H6 940 sing 49 n n C29 H7 940 sing 50 n n C4 H8 940 sing 51 n n C3 H9 940 sing 52 n n C1 H10 940 sing 53 n n C1 H11 940 sing 54 n n C1 H12 940 sing 55 n n C8 H13 940 sing 56 n n C8 H14 940 sing 57 n n C8 H15 940 sing 58 n n C6 H16 940 sing 59 n n C11 H17 940 sing 60 n n C11 H18 940 sing 61 n n C11 H19 940 sing 62 n n C22 H20 940 sing 63 n n C26 H21 940 sing 64 n n C26 H22 940 sing 65 n n C26 H23 940 sing 66 n n C25 H24 940 sing 67 n n C25 H25 940 sing 68 n n C25 H26 940 sing 69 n n C24 H27 940 sing 70 n n C24 H28 940 sing 71 n n C24 H29 940 sing 72 n n O3 H30 940 sing 73 n n C20 H31 940 sing 74 n n C19 H32 940 sing 75 n n C14 H33 940 sing 76 n n C17 H34 940 sing 77 n n C17 H35 940 sing 78 n n C18 H36 940 sing 79 n n C18 H37 940 sing 80 n n N1 H38 940 sing 81 n n # _atom_sites.entry_id 6LMQ _atom_sites.fract_transf_matrix[1][1] 0.013911 _atom_sites.fract_transf_matrix[1][2] 0.008032 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016063 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015263 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 301 1 SO4 SO4 . C 2 SO4 A 1 302 2 SO4 SO4 . D 3 PGE A 1 303 1 PGE PGE . E 4 940 A 1 304 1 940 940 . F 5 HOH A 1 401 21 HOH HOH . F 5 HOH A 2 402 20 HOH HOH . F 5 HOH A 3 403 8 HOH HOH . F 5 HOH A 4 404 10 HOH HOH . F 5 HOH A 5 405 5 HOH HOH . F 5 HOH A 6 406 23 HOH HOH . F 5 HOH A 7 407 7 HOH HOH . F 5 HOH A 8 408 16 HOH HOH . F 5 HOH A 9 409 27 HOH HOH . F 5 HOH A 10 410 34 HOH HOH . F 5 HOH A 11 411 24 HOH HOH . F 5 HOH A 12 412 11 HOH HOH . F 5 HOH A 13 413 4 HOH HOH . F 5 HOH A 14 414 1 HOH HOH . F 5 HOH A 15 415 9 HOH HOH . F 5 HOH A 16 416 2 HOH HOH . F 5 HOH A 17 417 6 HOH HOH . F 5 HOH A 18 418 39 HOH HOH . F 5 HOH A 19 419 17 HOH HOH . F 5 HOH A 20 420 41 HOH HOH . F 5 HOH A 21 421 32 HOH HOH . F 5 HOH A 22 422 3 HOH HOH . F 5 HOH A 23 423 15 HOH HOH . F 5 HOH A 24 424 37 HOH HOH . F 5 HOH A 25 425 36 HOH HOH . F 5 HOH A 26 426 38 HOH HOH . F 5 HOH A 27 427 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O6 940 . . . E 4 37.295 -36.005 -25.854 1 49.72 ? O6 940 304 A 1 HETATM 2 S S 940 . . . E 4 38.523 -35.999 -26.681 1 48.9 ? S 940 304 A 1 HETATM 3 O O5 940 . . . E 4 39.02 -37.384 -26.836 1 51.3 ? O5 940 304 A 1 HETATM 4 C C31 940 . . . E 4 39.686 -35.073 -25.938 1 51.57 ? C31 940 304 A 1 HETATM 5 N N2 940 . . . E 4 38.192 -35.386 -28.122 1 41.57 ? N2 940 304 A 1 HETATM 6 C C30 940 . . . E 4 37.367 -34.323 -28.23 1 35.44 ? C30 940 304 A 1 HETATM 7 C C28 940 . . . E 4 36.005 -34.517 -28.379 1 34.39 ? C28 940 304 A 1 HETATM 8 C C29 940 . . . E 4 35.443 -35.913 -28.42 1 27.63 ? C29 940 304 A 1 HETATM 9 C C9 940 . . . E 4 37.883 -33.039 -28.192 1 38.83 ? C9 940 304 A 1 HETATM 10 C C5 940 . . . E 4 39.347 -32.831 -28.032 1 40.73 ? C5 940 304 A 1 HETATM 11 C C4 940 . . . E 4 39.873 -32.522 -26.783 1 41.08 ? C4 940 304 A 1 HETATM 12 C C3 940 . . . E 4 41.241 -32.328 -26.636 1 46.66 ? C3 940 304 A 1 HETATM 13 C C2 940 . . . E 4 42.082 -32.444 -27.737 1 49.63 ? C2 940 304 A 1 HETATM 14 C C1 940 . . . E 4 43.565 -32.234 -27.576 1 50.47 ? C1 940 304 A 1 HETATM 15 C C7 940 . . . E 4 41.558 -32.752 -28.98 1 51.46 ? C7 940 304 A 1 HETATM 16 C C8 940 . . . E 4 42.471 -32.877 -30.171 1 54.91 ? C8 940 304 A 1 HETATM 17 C C6 940 . . . E 4 40.19 -32.947 -29.131 1 47.05 ? C6 940 304 A 1 HETATM 18 C C10 940 . . . E 4 37.037 -31.95 -28.303 1 32.67 ? C10 940 304 A 1 HETATM 19 C C11 940 . . . E 4 37.599 -30.553 -28.261 1 26.64 ? C11 940 304 A 1 HETATM 20 C C12 940 . . . E 4 35.675 -32.143 -28.451 1 31.46 ? C12 940 304 A 1 HETATM 21 C C21 940 . . . E 4 35.159 -33.427 -28.49 1 28.29 ? C21 940 304 A 1 HETATM 22 C C22 940 . . . E 4 33.702 -33.634 -28.649 1 28.29 ? C22 940 304 A 1 HETATM 23 O O2 940 . . . E 4 33.271 -34.673 -27.772 1 29.16 ? O2 940 304 A 1 HETATM 24 C C23 940 . . . E 4 32.709 -34.152 -26.57 1 25.08 ? C23 940 304 A 1 HETATM 25 C C26 940 . . . E 4 31.784 -32.995 -26.93 1 26 ? C26 940 304 A 1 HETATM 26 C C25 940 . . . E 4 31.921 -35.254 -25.876 1 24.71 ? C25 940 304 A 1 HETATM 27 C C24 940 . . . E 4 33.837 -33.659 -25.673 1 25.15 ? C24 940 304 A 1 HETATM 28 C C27 940 . . . E 4 33.403 -34.02 -30.067 1 33.59 ? C27 940 304 A 1 HETATM 29 O O4 940 . . . E 4 34.136 -33.571 -30.975 1 33.2 ? O4 940 304 A 1 HETATM 30 O O3 940 . . . E 4 32.433 -34.777 -30.287 1 28.59 ? O3 940 304 A 1 HETATM 31 C C13 940 . . . E 4 34.766 -30.973 -28.571 1 25.28 ? C13 940 304 A 1 HETATM 32 C C20 940 . . . E 4 34.309 -30.327 -27.428 1 26.26 ? C20 940 304 A 1 HETATM 33 C C19 940 . . . E 4 33.46 -29.234 -27.542 1 26.94 ? C19 940 304 A 1 HETATM 34 C C16 940 . . . E 4 33.066 -28.786 -28.798 1 29.29 ? C16 940 304 A 1 HETATM 35 C C15 940 . . . E 4 33.521 -29.429 -29.937 1 28.61 ? C15 940 304 A 1 HETATM 36 C C14 940 . . . E 4 34.371 -30.523 -29.825 1 31.22 ? C14 940 304 A 1 HETATM 37 O O1 940 . . . E 4 32.228 -27.707 -28.904 1 29.61 ? O1 940 304 A 1 HETATM 38 C C17 940 . . . E 4 31.511 -27.474 -30.115 1 30.61 ? C17 940 304 A 1 HETATM 39 C C18 940 . . . E 4 32.427 -27.744 -31.302 1 32.85 ? C18 940 304 A 1 HETATM 40 N N1 940 . . . E 4 33.142 -28.997 -31.159 1 34.25 ? N1 940 304 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #