data_6LO0 # _model_server_result.job_id BpcMt5mfNrRoJ5XlhcKvCg _model_server_result.datetime_utc '2025-01-28 22:52:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lo0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6LO0 # _exptl.entry_id 6LO0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 399.483 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{S})-4-methyl-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-2-[[(~{E})-3-phenylprop-2-enoyl]amino]pentanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.35 _cell.angle_gamma 90 _cell.entry_id 6LO0 _cell.length_a 108.669 _cell.length_b 81.544 _cell.length_c 53.382 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LO0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H29 N3 O4' _chem_comp.formula_weight 399.483 _chem_comp.id EOF _chem_comp.mon_nstd_flag . _chem_comp.name (2~{S})-4-methyl-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-2-[[(~{E})-3-phenylprop-2-enoyl]amino]pentanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 N27 EOF sing 83 n n C26 C25 EOF sing 84 n n N27 C28 EOF sing 85 n n C25 C24 EOF sing 86 n n C28 C24 EOF sing 87 n n C28 O29 EOF doub 88 n n C24 C23 EOF sing 89 n n O22 C21 EOF doub 90 n n C23 C20 EOF sing 91 n n O01 C02 EOF doub 92 n n C20 C21 EOF sing 93 n n C20 N19 EOF sing 94 n n C16 C17 EOF doub 95 n y C16 C15 EOF sing 96 n y C17 C12 EOF sing 97 n y C15 C14 EOF doub 98 n y C02 N19 EOF sing 99 n n C02 C03 EOF sing 100 n n C12 C11 EOF sing 101 n n C12 C13 EOF doub 102 n y C14 C13 EOF sing 103 n y C10 C11 EOF doub 104 e n C10 C09 EOF sing 105 n n C09 O18 EOF doub 106 n n C09 N08 EOF sing 107 n n N08 C03 EOF sing 108 n n C03 C04 EOF sing 109 n n C04 C05 EOF sing 110 n n C05 C06 EOF sing 111 n n C05 C07 EOF sing 112 n n C10 H1 EOF sing 113 n n C13 H3 EOF sing 114 n n C15 H4 EOF sing 115 n n C17 H5 EOF sing 116 n n C20 H6 EOF sing 117 n n C21 H7 EOF sing 118 n n C24 H8 EOF sing 119 n n C26 H9 EOF sing 120 n n C26 H10 EOF sing 121 n n C03 H11 EOF sing 122 n n C04 H12 EOF sing 123 n n C04 H13 EOF sing 124 n n C05 H14 EOF sing 125 n n C06 H15 EOF sing 126 n n C06 H16 EOF sing 127 n n C06 H17 EOF sing 128 n n C07 H18 EOF sing 129 n n C07 H19 EOF sing 130 n n C07 H20 EOF sing 131 n n C11 H21 EOF sing 132 n n C14 H23 EOF sing 133 n n C16 H24 EOF sing 134 n n C23 H25 EOF sing 135 n n C23 H26 EOF sing 136 n n C25 H27 EOF sing 137 n n C25 H28 EOF sing 138 n n N08 H29 EOF sing 139 n n N19 H30 EOF sing 140 n n N27 H31 EOF sing 141 n n # _atom_sites.entry_id 6LO0 _atom_sites.fract_transf_matrix[1][1] 0.009202 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002354 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012263 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019336 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EOF A 1 401 1 EOF LIG . C 3 HOH A 1 501 4 HOH HOH . C 3 HOH A 2 502 59 HOH HOH . C 3 HOH A 3 503 105 HOH HOH . C 3 HOH A 4 504 33 HOH HOH . C 3 HOH A 5 505 93 HOH HOH . C 3 HOH A 6 506 149 HOH HOH . C 3 HOH A 7 507 167 HOH HOH . C 3 HOH A 8 508 156 HOH HOH . C 3 HOH A 9 509 47 HOH HOH . C 3 HOH A 10 510 99 HOH HOH . C 3 HOH A 11 511 43 HOH HOH . C 3 HOH A 12 512 136 HOH HOH . C 3 HOH A 13 513 114 HOH HOH . C 3 HOH A 14 514 65 HOH HOH . C 3 HOH A 15 515 111 HOH HOH . C 3 HOH A 16 516 100 HOH HOH . C 3 HOH A 17 517 110 HOH HOH . C 3 HOH A 18 518 53 HOH HOH . C 3 HOH A 19 519 144 HOH HOH . C 3 HOH A 20 520 46 HOH HOH . C 3 HOH A 21 521 137 HOH HOH . C 3 HOH A 22 522 151 HOH HOH . C 3 HOH A 23 523 40 HOH HOH . C 3 HOH A 24 524 94 HOH HOH . C 3 HOH A 25 525 165 HOH HOH . C 3 HOH A 26 526 112 HOH HOH . C 3 HOH A 27 527 118 HOH HOH . C 3 HOH A 28 528 58 HOH HOH . C 3 HOH A 29 529 60 HOH HOH . C 3 HOH A 30 530 18 HOH HOH . C 3 HOH A 31 531 28 HOH HOH . C 3 HOH A 32 532 37 HOH HOH . C 3 HOH A 33 533 147 HOH HOH . C 3 HOH A 34 534 81 HOH HOH . C 3 HOH A 35 535 135 HOH HOH . C 3 HOH A 36 536 79 HOH HOH . C 3 HOH A 37 537 69 HOH HOH . C 3 HOH A 38 538 158 HOH HOH . C 3 HOH A 39 539 127 HOH HOH . C 3 HOH A 40 540 132 HOH HOH . C 3 HOH A 41 541 19 HOH HOH . C 3 HOH A 42 542 109 HOH HOH . C 3 HOH A 43 543 160 HOH HOH . C 3 HOH A 44 544 140 HOH HOH . C 3 HOH A 45 545 80 HOH HOH . C 3 HOH A 46 546 30 HOH HOH . C 3 HOH A 47 547 34 HOH HOH . C 3 HOH A 48 548 71 HOH HOH . C 3 HOH A 49 549 55 HOH HOH . C 3 HOH A 50 550 159 HOH HOH . C 3 HOH A 51 551 138 HOH HOH . C 3 HOH A 52 552 85 HOH HOH . C 3 HOH A 53 553 44 HOH HOH . C 3 HOH A 54 554 108 HOH HOH . C 3 HOH A 55 555 115 HOH HOH . C 3 HOH A 56 556 21 HOH HOH . C 3 HOH A 57 557 141 HOH HOH . C 3 HOH A 58 558 10 HOH HOH . C 3 HOH A 59 559 70 HOH HOH . C 3 HOH A 60 560 27 HOH HOH . C 3 HOH A 61 561 9 HOH HOH . C 3 HOH A 62 562 121 HOH HOH . C 3 HOH A 63 563 64 HOH HOH . C 3 HOH A 64 564 163 HOH HOH . C 3 HOH A 65 565 117 HOH HOH . C 3 HOH A 66 566 116 HOH HOH . C 3 HOH A 67 567 13 HOH HOH . C 3 HOH A 68 568 119 HOH HOH . C 3 HOH A 69 569 148 HOH HOH . C 3 HOH A 70 570 72 HOH HOH . C 3 HOH A 71 571 56 HOH HOH . C 3 HOH A 72 572 76 HOH HOH . C 3 HOH A 73 573 1 HOH HOH . C 3 HOH A 74 574 35 HOH HOH . C 3 HOH A 75 575 157 HOH HOH . C 3 HOH A 76 576 146 HOH HOH . C 3 HOH A 77 577 98 HOH HOH . C 3 HOH A 78 578 12 HOH HOH . C 3 HOH A 79 579 153 HOH HOH . C 3 HOH A 80 580 52 HOH HOH . C 3 HOH A 81 581 150 HOH HOH . C 3 HOH A 82 582 128 HOH HOH . C 3 HOH A 83 583 74 HOH HOH . C 3 HOH A 84 584 7 HOH HOH . C 3 HOH A 85 585 15 HOH HOH . C 3 HOH A 86 586 166 HOH HOH . C 3 HOH A 87 587 22 HOH HOH . C 3 HOH A 88 588 162 HOH HOH . C 3 HOH A 89 589 11 HOH HOH . C 3 HOH A 90 590 26 HOH HOH . C 3 HOH A 91 591 97 HOH HOH . C 3 HOH A 92 592 102 HOH HOH . C 3 HOH A 93 593 2 HOH HOH . C 3 HOH A 94 594 32 HOH HOH . C 3 HOH A 95 595 61 HOH HOH . C 3 HOH A 96 596 90 HOH HOH . C 3 HOH A 97 597 134 HOH HOH . C 3 HOH A 98 598 29 HOH HOH . C 3 HOH A 99 599 120 HOH HOH . C 3 HOH A 100 600 139 HOH HOH . C 3 HOH A 101 601 122 HOH HOH . C 3 HOH A 102 602 39 HOH HOH . C 3 HOH A 103 603 107 HOH HOH . C 3 HOH A 104 604 142 HOH HOH . C 3 HOH A 105 605 6 HOH HOH . C 3 HOH A 106 606 87 HOH HOH . C 3 HOH A 107 607 20 HOH HOH . C 3 HOH A 108 608 36 HOH HOH . C 3 HOH A 109 609 92 HOH HOH . C 3 HOH A 110 610 49 HOH HOH . C 3 HOH A 111 611 73 HOH HOH . C 3 HOH A 112 612 50 HOH HOH . C 3 HOH A 113 613 45 HOH HOH . C 3 HOH A 114 614 152 HOH HOH . C 3 HOH A 115 615 161 HOH HOH . C 3 HOH A 116 616 82 HOH HOH . C 3 HOH A 117 617 104 HOH HOH . C 3 HOH A 118 618 54 HOH HOH . C 3 HOH A 119 619 91 HOH HOH . C 3 HOH A 120 620 78 HOH HOH . C 3 HOH A 121 621 5 HOH HOH . C 3 HOH A 122 622 42 HOH HOH . C 3 HOH A 123 623 178 HOH HOH . C 3 HOH A 124 624 68 HOH HOH . C 3 HOH A 125 625 164 HOH HOH . C 3 HOH A 126 626 106 HOH HOH . C 3 HOH A 127 627 14 HOH HOH . C 3 HOH A 128 628 48 HOH HOH . C 3 HOH A 129 629 125 HOH HOH . C 3 HOH A 130 630 131 HOH HOH . C 3 HOH A 131 631 31 HOH HOH . C 3 HOH A 132 632 16 HOH HOH . C 3 HOH A 133 633 84 HOH HOH . C 3 HOH A 134 634 17 HOH HOH . C 3 HOH A 135 635 51 HOH HOH . C 3 HOH A 136 636 83 HOH HOH . C 3 HOH A 137 637 67 HOH HOH . C 3 HOH A 138 638 95 HOH HOH . C 3 HOH A 139 639 182 HOH HOH . C 3 HOH A 140 640 113 HOH HOH . C 3 HOH A 141 641 101 HOH HOH . C 3 HOH A 142 642 63 HOH HOH . C 3 HOH A 143 643 25 HOH HOH . C 3 HOH A 144 644 86 HOH HOH . C 3 HOH A 145 645 8 HOH HOH . C 3 HOH A 146 646 23 HOH HOH . C 3 HOH A 147 647 24 HOH HOH . C 3 HOH A 148 648 130 HOH HOH . C 3 HOH A 149 649 126 HOH HOH . C 3 HOH A 150 650 143 HOH HOH . C 3 HOH A 151 651 75 HOH HOH . C 3 HOH A 152 652 88 HOH HOH . C 3 HOH A 153 653 38 HOH HOH . C 3 HOH A 154 654 174 HOH HOH . C 3 HOH A 155 655 123 HOH HOH . C 3 HOH A 156 656 77 HOH HOH . C 3 HOH A 157 657 168 HOH HOH . C 3 HOH A 158 658 124 HOH HOH . C 3 HOH A 159 659 172 HOH HOH . C 3 HOH A 160 660 66 HOH HOH . C 3 HOH A 161 661 169 HOH HOH . C 3 HOH A 162 662 154 HOH HOH . C 3 HOH A 163 663 89 HOH HOH . C 3 HOH A 164 664 175 HOH HOH . C 3 HOH A 165 665 189 HOH HOH . C 3 HOH A 166 666 41 HOH HOH . C 3 HOH A 167 667 62 HOH HOH . C 3 HOH A 168 668 3 HOH HOH . C 3 HOH A 169 669 188 HOH HOH . C 3 HOH A 170 670 187 HOH HOH . C 3 HOH A 171 671 184 HOH HOH . C 3 HOH A 172 672 183 HOH HOH . C 3 HOH A 173 673 170 HOH HOH . C 3 HOH A 174 674 177 HOH HOH . C 3 HOH A 175 675 180 HOH HOH . C 3 HOH A 176 676 145 HOH HOH . C 3 HOH A 177 677 179 HOH HOH . C 3 HOH A 178 678 133 HOH HOH . C 3 HOH A 179 679 103 HOH HOH . C 3 HOH A 180 680 176 HOH HOH . C 3 HOH A 181 681 185 HOH HOH . C 3 HOH A 182 682 171 HOH HOH . C 3 HOH A 183 683 186 HOH HOH . C 3 HOH A 184 684 57 HOH HOH . C 3 HOH A 185 685 181 HOH HOH . C 3 HOH A 186 686 155 HOH HOH . C 3 HOH A 187 687 96 HOH HOH . C 3 HOH A 188 688 173 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C09 EOF . . . B 2 -24.144 -15.108 4.133 1 32.38 ? C09 EOF 401 A 1 HETATM 2 O O18 EOF . . . B 2 -22.916 -15.034 4.133 1 29.25 ? O18 EOF 401 A 1 HETATM 3 C C10 EOF . . . B 2 -25.016 -13.845 3.884 1 34.36 ? C10 EOF 401 A 1 HETATM 4 C C11 EOF . . . B 2 -24.302 -12.746 3.905 1 34.04 ? C11 EOF 401 A 1 HETATM 5 C C12 EOF . . . B 2 -25.177 -11.446 3.634 1 41.57 ? C12 EOF 401 A 1 HETATM 6 C C13 EOF . . . B 2 -26.503 -11.451 3.947 1 42.67 ? C13 EOF 401 A 1 HETATM 7 C C14 EOF . . . B 2 -27.266 -10.308 3.699 1 42.55 ? C14 EOF 401 A 1 HETATM 8 C C15 EOF . . . B 2 -26.664 -9.181 3.133 1 45.39 ? C15 EOF 401 A 1 HETATM 9 C C16 EOF . . . B 2 -25.321 -9.175 2.807 1 42.43 ? C16 EOF 401 A 1 HETATM 10 C C17 EOF . . . B 2 -24.564 -10.3 3.051 1 41.15 ? C17 EOF 401 A 1 HETATM 11 N N08 EOF . . . B 2 -24.826 -16.397 4.339 1 34.22 ? N08 EOF 401 A 1 HETATM 12 C C03 EOF . . . B 2 -24.046 -17.571 4.555 1 34.58 ? C03 EOF 401 A 1 HETATM 13 C C02 EOF . . . B 2 -23.304 -17.944 3.251 1 37.77 ? C02 EOF 401 A 1 HETATM 14 O O01 EOF . . . B 2 -23.758 -17.669 2.17 1 38.9 ? O01 EOF 401 A 1 HETATM 15 C C04 EOF . . . B 2 -24.984 -18.745 4.919 1 32.69 ? C04 EOF 401 A 1 HETATM 16 C C05 EOF . . . B 2 -25.724 -18.524 6.249 1 32.26 ? C05 EOF 401 A 1 HETATM 17 C C06 EOF . . . B 2 -26.899 -19.496 6.393 1 37.8 ? C06 EOF 401 A 1 HETATM 18 C C07 EOF . . . B 2 -24.763 -18.638 7.45 1 29.79 ? C07 EOF 401 A 1 HETATM 19 O O29 EOF . . . B 2 -18.128 -15.95 2.125 1 40.93 ? O29 EOF 401 A 1 HETATM 20 C C28 EOF . . . B 2 -19.01 -15.906 1.3 1 39.32 ? C28 EOF 401 A 1 HETATM 21 N N27 EOF . . . B 2 -19.014 -15.198 0.146 1 31.44 ? N27 EOF 401 A 1 HETATM 22 C C26 EOF . . . B 2 -20.369 -15.497 -0.536 1 28.97 ? C26 EOF 401 A 1 HETATM 23 C C25 EOF . . . B 2 -20.881 -16.8 0.192 1 35.97 ? C25 EOF 401 A 1 HETATM 24 C C24 EOF . . . B 2 -20.401 -16.718 1.403 1 34.46 ? C24 EOF 401 A 1 HETATM 25 C C23 EOF . . . B 2 -20.054 -18.167 1.992 1 34.13 ? C23 EOF 401 A 1 HETATM 26 C C20 EOF . . . B 2 -21.26 -19.069 2.173 1 39.15 ? C20 EOF 401 A 1 HETATM 27 N N19 EOF . . . B 2 -22.008 -18.675 3.363 1 37.64 ? N19 EOF 401 A 1 HETATM 28 C C21 EOF . . . B 2 -20.782 -20.48 2.429 1 42.21 ? C21 EOF 401 A 1 HETATM 29 O O22 EOF . . . B 2 -21.095 -21.332 1.713 1 46.02 ? O22 EOF 401 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 29 #