data_6LOR # _model_server_result.job_id iXEbXFjh93jbmKK0lifKrw _model_server_result.datetime_utc '2024-12-19 14:49:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lor # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6LOR # _exptl.entry_id 6LOR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6LOR _cell.length_a 130.361 _cell.length_b 130.361 _cell.length_c 39.333 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LOR _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id ND2 _struct_conn.ptnr1_label_comp_id ASN _struct_conn.ptnr1_label_seq_id 250 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ASN _struct_conn.ptnr1_auth_seq_id 250 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id NAG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NAG _struct_conn.ptnr2_auth_seq_id 302 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.434 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 268 n n C1 O1 NAG sing 269 n n C1 O5 NAG sing 270 n n C1 H1 NAG sing 271 n n C2 C3 NAG sing 272 n n C2 N2 NAG sing 273 n n C2 H2 NAG sing 274 n n C3 C4 NAG sing 275 n n C3 O3 NAG sing 276 n n C3 H3 NAG sing 277 n n C4 C5 NAG sing 278 n n C4 O4 NAG sing 279 n n C4 H4 NAG sing 280 n n C5 C6 NAG sing 281 n n C5 O5 NAG sing 282 n n C5 H5 NAG sing 283 n n C6 O6 NAG sing 284 n n C6 H61 NAG sing 285 n n C6 H62 NAG sing 286 n n C7 C8 NAG sing 287 n n C7 N2 NAG sing 288 n n C7 O7 NAG doub 289 n n C8 H81 NAG sing 290 n n C8 H82 NAG sing 291 n n C8 H83 NAG sing 292 n n N2 HN2 NAG sing 293 n n O1 HO1 NAG sing 294 n n O3 HO3 NAG sing 295 n n O4 HO4 NAG sing 296 n n O6 HO6 NAG sing 297 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 6LOR _atom_sites.fract_transf_matrix[1][1] 0.007671 _atom_sites.fract_transf_matrix[1][2] 0.004429 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008858 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025424 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 301 396 ADP ADP . C 3 NAG A 1 302 1 NAG NAG . D 4 HOH A 1 401 196 HOH HOH . D 4 HOH A 2 402 178 HOH HOH . D 4 HOH A 3 403 73 HOH HOH . D 4 HOH A 4 404 144 HOH HOH . D 4 HOH A 5 405 198 HOH HOH . D 4 HOH A 6 406 161 HOH HOH . D 4 HOH A 7 407 46 HOH HOH . D 4 HOH A 8 408 15 HOH HOH . D 4 HOH A 9 409 35 HOH HOH . D 4 HOH A 10 410 143 HOH HOH . D 4 HOH A 11 411 57 HOH HOH . D 4 HOH A 12 412 150 HOH HOH . D 4 HOH A 13 413 149 HOH HOH . D 4 HOH A 14 414 190 HOH HOH . D 4 HOH A 15 415 160 HOH HOH . D 4 HOH A 16 416 201 HOH HOH . D 4 HOH A 17 417 169 HOH HOH . D 4 HOH A 18 418 182 HOH HOH . D 4 HOH A 19 419 82 HOH HOH . D 4 HOH A 20 420 10 HOH HOH . D 4 HOH A 21 421 14 HOH HOH . D 4 HOH A 22 422 167 HOH HOH . D 4 HOH A 23 423 215 HOH HOH . D 4 HOH A 24 424 122 HOH HOH . D 4 HOH A 25 425 93 HOH HOH . D 4 HOH A 26 426 213 HOH HOH . D 4 HOH A 27 427 124 HOH HOH . D 4 HOH A 28 428 27 HOH HOH . D 4 HOH A 29 429 107 HOH HOH . D 4 HOH A 30 430 225 HOH HOH . D 4 HOH A 31 431 104 HOH HOH . D 4 HOH A 32 432 165 HOH HOH . D 4 HOH A 33 433 4 HOH HOH . D 4 HOH A 34 434 17 HOH HOH . D 4 HOH A 35 435 91 HOH HOH . D 4 HOH A 36 436 2 HOH HOH . D 4 HOH A 37 437 229 HOH HOH . D 4 HOH A 38 438 72 HOH HOH . D 4 HOH A 39 439 156 HOH HOH . D 4 HOH A 40 440 64 HOH HOH . D 4 HOH A 41 441 131 HOH HOH . D 4 HOH A 42 442 128 HOH HOH . D 4 HOH A 43 443 92 HOH HOH . D 4 HOH A 44 444 166 HOH HOH . D 4 HOH A 45 445 147 HOH HOH . D 4 HOH A 46 446 85 HOH HOH . D 4 HOH A 47 447 70 HOH HOH . D 4 HOH A 48 448 5 HOH HOH . D 4 HOH A 49 449 217 HOH HOH . D 4 HOH A 50 450 18 HOH HOH . D 4 HOH A 51 451 216 HOH HOH . D 4 HOH A 52 452 24 HOH HOH . D 4 HOH A 53 453 194 HOH HOH . D 4 HOH A 54 454 50 HOH HOH . D 4 HOH A 55 455 45 HOH HOH . D 4 HOH A 56 456 199 HOH HOH . D 4 HOH A 57 457 75 HOH HOH . D 4 HOH A 58 458 114 HOH HOH . D 4 HOH A 59 459 56 HOH HOH . D 4 HOH A 60 460 218 HOH HOH . D 4 HOH A 61 461 89 HOH HOH . D 4 HOH A 62 462 95 HOH HOH . D 4 HOH A 63 463 33 HOH HOH . D 4 HOH A 64 464 125 HOH HOH . D 4 HOH A 65 465 44 HOH HOH . D 4 HOH A 66 466 204 HOH HOH . D 4 HOH A 67 467 29 HOH HOH . D 4 HOH A 68 468 121 HOH HOH . D 4 HOH A 69 469 41 HOH HOH . D 4 HOH A 70 470 47 HOH HOH . D 4 HOH A 71 471 234 HOH HOH . D 4 HOH A 72 472 103 HOH HOH . D 4 HOH A 73 473 62 HOH HOH . D 4 HOH A 74 474 36 HOH HOH . D 4 HOH A 75 475 134 HOH HOH . D 4 HOH A 76 476 34 HOH HOH . D 4 HOH A 77 477 81 HOH HOH . D 4 HOH A 78 478 84 HOH HOH . D 4 HOH A 79 479 115 HOH HOH . D 4 HOH A 80 480 42 HOH HOH . D 4 HOH A 81 481 133 HOH HOH . D 4 HOH A 82 482 94 HOH HOH . D 4 HOH A 83 483 223 HOH HOH . D 4 HOH A 84 484 40 HOH HOH . D 4 HOH A 85 485 230 HOH HOH . D 4 HOH A 86 486 58 HOH HOH . D 4 HOH A 87 487 235 HOH HOH . D 4 HOH A 88 488 21 HOH HOH . D 4 HOH A 89 489 63 HOH HOH . D 4 HOH A 90 490 109 HOH HOH . D 4 HOH A 91 491 96 HOH HOH . D 4 HOH A 92 492 145 HOH HOH . D 4 HOH A 93 493 61 HOH HOH . D 4 HOH A 94 494 12 HOH HOH . D 4 HOH A 95 495 136 HOH HOH . D 4 HOH A 96 496 202 HOH HOH . D 4 HOH A 97 497 151 HOH HOH . D 4 HOH A 98 498 37 HOH HOH . D 4 HOH A 99 499 22 HOH HOH . D 4 HOH A 100 500 76 HOH HOH . D 4 HOH A 101 501 127 HOH HOH . D 4 HOH A 102 502 16 HOH HOH . D 4 HOH A 103 503 1 HOH HOH . D 4 HOH A 104 504 163 HOH HOH . D 4 HOH A 105 505 192 HOH HOH . D 4 HOH A 106 506 68 HOH HOH . D 4 HOH A 107 507 88 HOH HOH . D 4 HOH A 108 508 220 HOH HOH . D 4 HOH A 109 509 126 HOH HOH . D 4 HOH A 110 510 118 HOH HOH . D 4 HOH A 111 511 3 HOH HOH . D 4 HOH A 112 512 19 HOH HOH . D 4 HOH A 113 513 226 HOH HOH . D 4 HOH A 114 514 9 HOH HOH . D 4 HOH A 115 515 48 HOH HOH . D 4 HOH A 116 516 177 HOH HOH . D 4 HOH A 117 517 183 HOH HOH . D 4 HOH A 118 518 59 HOH HOH . D 4 HOH A 119 519 11 HOH HOH . D 4 HOH A 120 520 106 HOH HOH . D 4 HOH A 121 521 49 HOH HOH . D 4 HOH A 122 522 117 HOH HOH . D 4 HOH A 123 523 232 HOH HOH . D 4 HOH A 124 524 8 HOH HOH . D 4 HOH A 125 525 203 HOH HOH . D 4 HOH A 126 526 98 HOH HOH . D 4 HOH A 127 527 175 HOH HOH . D 4 HOH A 128 528 60 HOH HOH . D 4 HOH A 129 529 90 HOH HOH . D 4 HOH A 130 530 111 HOH HOH . D 4 HOH A 131 531 86 HOH HOH . D 4 HOH A 132 532 25 HOH HOH . D 4 HOH A 133 533 51 HOH HOH . D 4 HOH A 134 534 176 HOH HOH . D 4 HOH A 135 535 228 HOH HOH . D 4 HOH A 136 536 39 HOH HOH . D 4 HOH A 137 537 168 HOH HOH . D 4 HOH A 138 538 32 HOH HOH . D 4 HOH A 139 539 119 HOH HOH . D 4 HOH A 140 540 30 HOH HOH . D 4 HOH A 141 541 77 HOH HOH . D 4 HOH A 142 542 210 HOH HOH . D 4 HOH A 143 543 222 HOH HOH . D 4 HOH A 144 544 116 HOH HOH . D 4 HOH A 145 545 110 HOH HOH . D 4 HOH A 146 546 100 HOH HOH . D 4 HOH A 147 547 55 HOH HOH . D 4 HOH A 148 548 38 HOH HOH . D 4 HOH A 149 549 23 HOH HOH . D 4 HOH A 150 550 28 HOH HOH . D 4 HOH A 151 551 99 HOH HOH . D 4 HOH A 152 552 101 HOH HOH . D 4 HOH A 153 553 71 HOH HOH . D 4 HOH A 154 554 186 HOH HOH . D 4 HOH A 155 555 20 HOH HOH . D 4 HOH A 156 556 26 HOH HOH . D 4 HOH A 157 557 13 HOH HOH . D 4 HOH A 158 558 7 HOH HOH . D 4 HOH A 159 559 97 HOH HOH . D 4 HOH A 160 560 189 HOH HOH . D 4 HOH A 161 561 135 HOH HOH . D 4 HOH A 162 562 172 HOH HOH . D 4 HOH A 163 563 83 HOH HOH . D 4 HOH A 164 564 74 HOH HOH . D 4 HOH A 165 565 6 HOH HOH . D 4 HOH A 166 566 120 HOH HOH . D 4 HOH A 167 567 67 HOH HOH . D 4 HOH A 168 568 65 HOH HOH . D 4 HOH A 169 569 187 HOH HOH . D 4 HOH A 170 570 205 HOH HOH . D 4 HOH A 171 571 180 HOH HOH . D 4 HOH A 172 572 181 HOH HOH . D 4 HOH A 173 573 78 HOH HOH . D 4 HOH A 174 574 112 HOH HOH . D 4 HOH A 175 575 174 HOH HOH . D 4 HOH A 176 576 233 HOH HOH . D 4 HOH A 177 577 185 HOH HOH . D 4 HOH A 178 578 87 HOH HOH . D 4 HOH A 179 579 197 HOH HOH . D 4 HOH A 180 580 129 HOH HOH . D 4 HOH A 181 581 148 HOH HOH . D 4 HOH A 182 582 159 HOH HOH . D 4 HOH A 183 583 54 HOH HOH . D 4 HOH A 184 584 141 HOH HOH . D 4 HOH A 185 585 208 HOH HOH . D 4 HOH A 186 586 105 HOH HOH . D 4 HOH A 187 587 153 HOH HOH . D 4 HOH A 188 588 123 HOH HOH . D 4 HOH A 189 589 171 HOH HOH . D 4 HOH A 190 590 236 HOH HOH . D 4 HOH A 191 591 43 HOH HOH . D 4 HOH A 192 592 224 HOH HOH . D 4 HOH A 193 593 53 HOH HOH . D 4 HOH A 194 594 130 HOH HOH . D 4 HOH A 195 595 214 HOH HOH . D 4 HOH A 196 596 142 HOH HOH . D 4 HOH A 197 597 113 HOH HOH . D 4 HOH A 198 598 227 HOH HOH . D 4 HOH A 199 599 69 HOH HOH . D 4 HOH A 200 600 139 HOH HOH . D 4 HOH A 201 601 162 HOH HOH . D 4 HOH A 202 602 79 HOH HOH . D 4 HOH A 203 603 140 HOH HOH . D 4 HOH A 204 604 155 HOH HOH . D 4 HOH A 205 605 195 HOH HOH . D 4 HOH A 206 606 146 HOH HOH . D 4 HOH A 207 607 52 HOH HOH . D 4 HOH A 208 608 179 HOH HOH . D 4 HOH A 209 609 132 HOH HOH . D 4 HOH A 210 610 173 HOH HOH . D 4 HOH A 211 611 211 HOH HOH . D 4 HOH A 212 612 221 HOH HOH . D 4 HOH A 213 613 158 HOH HOH . D 4 HOH A 214 614 206 HOH HOH . D 4 HOH A 215 615 238 HOH HOH . D 4 HOH A 216 616 66 HOH HOH . D 4 HOH A 217 617 138 HOH HOH . D 4 HOH A 218 618 237 HOH HOH . D 4 HOH A 219 619 231 HOH HOH . D 4 HOH A 220 620 219 HOH HOH . D 4 HOH A 221 621 31 HOH HOH . D 4 HOH A 222 622 80 HOH HOH . D 4 HOH A 223 623 212 HOH HOH . D 4 HOH A 224 624 154 HOH HOH . D 4 HOH A 225 625 102 HOH HOH . D 4 HOH A 226 626 184 HOH HOH . D 4 HOH A 227 627 207 HOH HOH . D 4 HOH A 228 628 164 HOH HOH . D 4 HOH A 229 629 137 HOH HOH . D 4 HOH A 230 630 170 HOH HOH . D 4 HOH A 231 631 157 HOH HOH . D 4 HOH A 232 632 108 HOH HOH . D 4 HOH A 233 633 152 HOH HOH . D 4 HOH A 234 634 193 HOH HOH . D 4 HOH A 235 635 200 HOH HOH . D 4 HOH A 236 636 188 HOH HOH . D 4 HOH A 237 637 209 HOH HOH . D 4 HOH A 238 638 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . C 3 9.937 -42.486 -17.338 1 42.54 ? C1 NAG 302 A 1 HETATM 2 C C2 NAG . . . C 3 10.453 -42.39 -18.772 1 46.5 ? C2 NAG 302 A 1 HETATM 3 C C3 NAG . . . C 3 11.975 -42.476 -18.724 1 49.01 ? C3 NAG 302 A 1 HETATM 4 C C4 NAG . . . C 3 12.521 -41.359 -17.84 1 49.74 ? C4 NAG 302 A 1 HETATM 5 C C5 NAG . . . C 3 11.793 -41.254 -16.497 1 49.84 ? C5 NAG 302 A 1 HETATM 6 C C6 NAG . . . C 3 12.103 -39.945 -15.771 1 50.59 ? C6 NAG 302 A 1 HETATM 7 C C7 NAG . . . C 3 9.843 -44.686 -19.44 1 52.79 ? C7 NAG 302 A 1 HETATM 8 C C8 NAG . . . C 3 9.282 -45.496 -20.571 1 53.07 ? C8 NAG 302 A 1 HETATM 9 N N2 NAG . . . C 3 9.889 -43.373 -19.68 1 48.04 ? N2 NAG 302 A 1 HETATM 10 O O3 NAG . . . C 3 12.537 -42.333 -20.033 1 51.69 ? O3 NAG 302 A 1 HETATM 11 O O4 NAG . . . C 3 13.909 -41.602 -17.607 1 52.93 ? O4 NAG 302 A 1 HETATM 12 O O5 NAG . . . C 3 10.383 -41.309 -16.679 1 46.33 ? O5 NAG 302 A 1 HETATM 13 O O6 NAG . . . C 3 12.953 -40.209 -14.652 1 54.17 ? O6 NAG 302 A 1 HETATM 14 O O7 NAG . . . C 3 10.229 -45.22 -18.41 1 53.64 ? O7 NAG 302 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #