data_6LOW # _model_server_result.job_id B45ZEwKF3nqu9uTl-orX9w _model_server_result.datetime_utc '2024-11-26 13:54:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6low # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6LOW # _exptl.entry_id 6LOW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 363.221 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6LOW _cell.length_a 130.92 _cell.length_b 130.92 _cell.length_c 36.832 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LOW _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id ND2 _struct_conn.ptnr1_label_comp_id ASN _struct_conn.ptnr1_label_seq_id 250 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ASN _struct_conn.ptnr1_auth_seq_id 250 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id NAG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NAG _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.431 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H14 N5 O8 P' _chem_comp.formula_weight 363.221 _chem_comp.id 5GP _chem_comp.mon_nstd_flag . _chem_comp.name "GUANOSINE-5'-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P 5GP doub 1 n n P O2P 5GP sing 2 n n P O3P 5GP sing 3 n n P O5' 5GP sing 4 n n O2P HOP2 5GP sing 5 n n O3P HOP3 5GP sing 6 n n O5' C5' 5GP sing 7 n n C5' C4' 5GP sing 8 n n C5' "H5'1" 5GP sing 9 n n C5' "H5'2" 5GP sing 10 n n C4' O4' 5GP sing 11 n n C4' C3' 5GP sing 12 n n C4' H4' 5GP sing 13 n n O4' C1' 5GP sing 14 n n C3' O3' 5GP sing 15 n n C3' C2' 5GP sing 16 n n C3' H3' 5GP sing 17 n n O3' HO3' 5GP sing 18 n n C2' O2' 5GP sing 19 n n C2' C1' 5GP sing 20 n n C2' H2' 5GP sing 21 n n O2' HO2' 5GP sing 22 n n C1' N9 5GP sing 23 n n C1' H1' 5GP sing 24 n n N9 C8 5GP sing 25 n y N9 C4 5GP sing 26 n y C8 N7 5GP doub 27 n y C8 H8 5GP sing 28 n n N7 C5 5GP sing 29 n y C5 C6 5GP sing 30 n n C5 C4 5GP doub 31 n y C6 O6 5GP doub 32 n n C6 N1 5GP sing 33 n n N1 C2 5GP sing 34 n n N1 HN1 5GP sing 35 n n C2 N2 5GP sing 36 n n C2 N3 5GP doub 37 n n N2 HN21 5GP sing 38 n n N2 HN22 5GP sing 39 n n N3 C4 5GP sing 40 n n # _atom_sites.entry_id 6LOW _atom_sites.fract_transf_matrix[1][1] 0.007638 _atom_sites.fract_transf_matrix[1][2] 0.00441 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00882 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02715 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 301 1 NAG NAG . C 3 5GP A 1 302 600 5GP 5GP . D 4 HOH A 1 401 134 HOH HOH . D 4 HOH A 2 402 151 HOH HOH . D 4 HOH A 3 403 154 HOH HOH . D 4 HOH A 4 404 56 HOH HOH . D 4 HOH A 5 405 63 HOH HOH . D 4 HOH A 6 406 33 HOH HOH . D 4 HOH A 7 407 143 HOH HOH . D 4 HOH A 8 408 166 HOH HOH . D 4 HOH A 9 409 76 HOH HOH . D 4 HOH A 10 410 37 HOH HOH . D 4 HOH A 11 411 171 HOH HOH . D 4 HOH A 12 412 170 HOH HOH . D 4 HOH A 13 413 172 HOH HOH . D 4 HOH A 14 414 22 HOH HOH . D 4 HOH A 15 415 20 HOH HOH . D 4 HOH A 16 416 183 HOH HOH . D 4 HOH A 17 417 112 HOH HOH . D 4 HOH A 18 418 69 HOH HOH . D 4 HOH A 19 419 96 HOH HOH . D 4 HOH A 20 420 95 HOH HOH . D 4 HOH A 21 421 81 HOH HOH . D 4 HOH A 22 422 168 HOH HOH . D 4 HOH A 23 423 103 HOH HOH . D 4 HOH A 24 424 15 HOH HOH . D 4 HOH A 25 425 119 HOH HOH . D 4 HOH A 26 426 12 HOH HOH . D 4 HOH A 27 427 9 HOH HOH . D 4 HOH A 28 428 109 HOH HOH . D 4 HOH A 29 429 148 HOH HOH . D 4 HOH A 30 430 113 HOH HOH . D 4 HOH A 31 431 85 HOH HOH . D 4 HOH A 32 432 145 HOH HOH . D 4 HOH A 33 433 121 HOH HOH . D 4 HOH A 34 434 77 HOH HOH . D 4 HOH A 35 435 41 HOH HOH . D 4 HOH A 36 436 78 HOH HOH . D 4 HOH A 37 437 48 HOH HOH . D 4 HOH A 38 438 185 HOH HOH . D 4 HOH A 39 439 30 HOH HOH . D 4 HOH A 40 440 64 HOH HOH . D 4 HOH A 41 441 189 HOH HOH . D 4 HOH A 42 442 101 HOH HOH . D 4 HOH A 43 443 42 HOH HOH . D 4 HOH A 44 444 5 HOH HOH . D 4 HOH A 45 445 35 HOH HOH . D 4 HOH A 46 446 75 HOH HOH . D 4 HOH A 47 447 162 HOH HOH . D 4 HOH A 48 448 99 HOH HOH . D 4 HOH A 49 449 11 HOH HOH . D 4 HOH A 50 450 46 HOH HOH . D 4 HOH A 51 451 16 HOH HOH . D 4 HOH A 52 452 25 HOH HOH . D 4 HOH A 53 453 57 HOH HOH . D 4 HOH A 54 454 118 HOH HOH . D 4 HOH A 55 455 17 HOH HOH . D 4 HOH A 56 456 193 HOH HOH . D 4 HOH A 57 457 8 HOH HOH . D 4 HOH A 58 458 122 HOH HOH . D 4 HOH A 59 459 29 HOH HOH . D 4 HOH A 60 460 115 HOH HOH . D 4 HOH A 61 461 2 HOH HOH . D 4 HOH A 62 462 47 HOH HOH . D 4 HOH A 63 463 82 HOH HOH . D 4 HOH A 64 464 50 HOH HOH . D 4 HOH A 65 465 152 HOH HOH . D 4 HOH A 66 466 55 HOH HOH . D 4 HOH A 67 467 110 HOH HOH . D 4 HOH A 68 468 79 HOH HOH . D 4 HOH A 69 469 62 HOH HOH . D 4 HOH A 70 470 71 HOH HOH . D 4 HOH A 71 471 177 HOH HOH . D 4 HOH A 72 472 158 HOH HOH . D 4 HOH A 73 473 89 HOH HOH . D 4 HOH A 74 474 38 HOH HOH . D 4 HOH A 75 475 180 HOH HOH . D 4 HOH A 76 476 92 HOH HOH . D 4 HOH A 77 477 74 HOH HOH . D 4 HOH A 78 478 21 HOH HOH . D 4 HOH A 79 479 80 HOH HOH . D 4 HOH A 80 480 39 HOH HOH . D 4 HOH A 81 481 190 HOH HOH . D 4 HOH A 82 482 187 HOH HOH . D 4 HOH A 83 483 175 HOH HOH . D 4 HOH A 84 484 111 HOH HOH . D 4 HOH A 85 485 73 HOH HOH . D 4 HOH A 86 486 128 HOH HOH . D 4 HOH A 87 487 68 HOH HOH . D 4 HOH A 88 488 160 HOH HOH . D 4 HOH A 89 489 51 HOH HOH . D 4 HOH A 90 490 159 HOH HOH . D 4 HOH A 91 491 104 HOH HOH . D 4 HOH A 92 492 61 HOH HOH . D 4 HOH A 93 493 83 HOH HOH . D 4 HOH A 94 494 107 HOH HOH . D 4 HOH A 95 495 84 HOH HOH . D 4 HOH A 96 496 27 HOH HOH . D 4 HOH A 97 497 192 HOH HOH . D 4 HOH A 98 498 70 HOH HOH . D 4 HOH A 99 499 49 HOH HOH . D 4 HOH A 100 500 133 HOH HOH . D 4 HOH A 101 501 105 HOH HOH . D 4 HOH A 102 502 28 HOH HOH . D 4 HOH A 103 503 52 HOH HOH . D 4 HOH A 104 504 7 HOH HOH . D 4 HOH A 105 505 106 HOH HOH . D 4 HOH A 106 506 91 HOH HOH . D 4 HOH A 107 507 88 HOH HOH . D 4 HOH A 108 508 10 HOH HOH . D 4 HOH A 109 509 58 HOH HOH . D 4 HOH A 110 510 102 HOH HOH . D 4 HOH A 111 511 167 HOH HOH . D 4 HOH A 112 512 60 HOH HOH . D 4 HOH A 113 513 93 HOH HOH . D 4 HOH A 114 514 138 HOH HOH . D 4 HOH A 115 515 43 HOH HOH . D 4 HOH A 116 516 196 HOH HOH . D 4 HOH A 117 517 194 HOH HOH . D 4 HOH A 118 518 87 HOH HOH . D 4 HOH A 119 519 161 HOH HOH . D 4 HOH A 120 520 44 HOH HOH . D 4 HOH A 121 521 120 HOH HOH . D 4 HOH A 122 522 117 HOH HOH . D 4 HOH A 123 523 108 HOH HOH . D 4 HOH A 124 524 14 HOH HOH . D 4 HOH A 125 525 98 HOH HOH . D 4 HOH A 126 526 53 HOH HOH . D 4 HOH A 127 527 164 HOH HOH . D 4 HOH A 128 528 59 HOH HOH . D 4 HOH A 129 529 72 HOH HOH . D 4 HOH A 130 530 34 HOH HOH . D 4 HOH A 131 531 178 HOH HOH . D 4 HOH A 132 532 182 HOH HOH . D 4 HOH A 133 533 45 HOH HOH . D 4 HOH A 134 534 23 HOH HOH . D 4 HOH A 135 535 54 HOH HOH . D 4 HOH A 136 536 18 HOH HOH . D 4 HOH A 137 537 26 HOH HOH . D 4 HOH A 138 538 137 HOH HOH . D 4 HOH A 139 539 36 HOH HOH . D 4 HOH A 140 540 135 HOH HOH . D 4 HOH A 141 541 1 HOH HOH . D 4 HOH A 142 542 132 HOH HOH . D 4 HOH A 143 543 65 HOH HOH . D 4 HOH A 144 544 131 HOH HOH . D 4 HOH A 145 545 90 HOH HOH . D 4 HOH A 146 546 204 HOH HOH . D 4 HOH A 147 547 188 HOH HOH . D 4 HOH A 148 548 6 HOH HOH . D 4 HOH A 149 549 32 HOH HOH . D 4 HOH A 150 550 19 HOH HOH . D 4 HOH A 151 551 97 HOH HOH . D 4 HOH A 152 552 199 HOH HOH . D 4 HOH A 153 553 86 HOH HOH . D 4 HOH A 154 554 202 HOH HOH . D 4 HOH A 155 555 31 HOH HOH . D 4 HOH A 156 556 149 HOH HOH . D 4 HOH A 157 557 3 HOH HOH . D 4 HOH A 158 558 116 HOH HOH . D 4 HOH A 159 559 94 HOH HOH . D 4 HOH A 160 560 155 HOH HOH . D 4 HOH A 161 561 4 HOH HOH . D 4 HOH A 162 562 13 HOH HOH . D 4 HOH A 163 563 123 HOH HOH . D 4 HOH A 164 564 40 HOH HOH . D 4 HOH A 165 565 165 HOH HOH . D 4 HOH A 166 566 66 HOH HOH . D 4 HOH A 167 567 181 HOH HOH . D 4 HOH A 168 568 163 HOH HOH . D 4 HOH A 169 569 179 HOH HOH . D 4 HOH A 170 570 174 HOH HOH . D 4 HOH A 171 571 142 HOH HOH . D 4 HOH A 172 572 184 HOH HOH . D 4 HOH A 173 573 24 HOH HOH . D 4 HOH A 174 574 156 HOH HOH . D 4 HOH A 175 575 129 HOH HOH . D 4 HOH A 176 576 139 HOH HOH . D 4 HOH A 177 577 67 HOH HOH . D 4 HOH A 178 578 141 HOH HOH . D 4 HOH A 179 579 195 HOH HOH . D 4 HOH A 180 580 203 HOH HOH . D 4 HOH A 181 581 126 HOH HOH . D 4 HOH A 182 582 144 HOH HOH . D 4 HOH A 183 583 147 HOH HOH . D 4 HOH A 184 584 146 HOH HOH . D 4 HOH A 185 585 127 HOH HOH . D 4 HOH A 186 586 201 HOH HOH . D 4 HOH A 187 587 150 HOH HOH . D 4 HOH A 188 588 186 HOH HOH . D 4 HOH A 189 589 100 HOH HOH . D 4 HOH A 190 590 125 HOH HOH . D 4 HOH A 191 591 169 HOH HOH . D 4 HOH A 192 592 191 HOH HOH . D 4 HOH A 193 593 198 HOH HOH . D 4 HOH A 194 594 153 HOH HOH . D 4 HOH A 195 595 197 HOH HOH . D 4 HOH A 196 596 114 HOH HOH . D 4 HOH A 197 597 176 HOH HOH . D 4 HOH A 198 598 124 HOH HOH . D 4 HOH A 199 599 200 HOH HOH . D 4 HOH A 200 600 140 HOH HOH . D 4 HOH A 201 601 130 HOH HOH . D 4 HOH A 202 602 173 HOH HOH . D 4 HOH A 203 603 136 HOH HOH . D 4 HOH A 204 604 157 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 5GP . . . C 3 -7.532 25.113 9.642 1 85.06 ? P 5GP 302 A 1 HETATM 2 O O1P 5GP . . . C 3 -6.732 25.688 8.495 1 84.82 ? O1P 5GP 302 A 1 HETATM 3 O O2P 5GP . . . C 3 -8.716 26.014 9.912 1 83.98 ? O2P 5GP 302 A 1 HETATM 4 O O3P 5GP . . . C 3 -6.654 25.08 10.873 1 84.37 ? O3P 5GP 302 A 1 HETATM 5 O O5' 5GP . . . C 3 -8.035 23.63 9.314 1 76.33 ? O5' 5GP 302 A 1 HETATM 6 C C5' 5GP . . . C 3 -7.948 23.049 8.016 1 68.67 ? C5' 5GP 302 A 1 HETATM 7 C C4' 5GP . . . C 3 -6.933 21.957 7.957 1 64.52 ? C4' 5GP 302 A 1 HETATM 8 O O4' 5GP . . . C 3 -6.581 21.677 6.718 1 62.55 ? O4' 5GP 302 A 1 HETATM 9 C C3' 5GP . . . C 3 -5.549 22.432 8.733 1 61.48 ? C3' 5GP 302 A 1 HETATM 10 O O3' 5GP . . . C 3 -4.905 21.271 9.375 1 63.67 ? O3' 5GP 302 A 1 HETATM 11 C C2' 5GP . . . C 3 -4.883 22.917 7.813 1 57.98 ? C2' 5GP 302 A 1 HETATM 12 O O2' 5GP . . . C 3 -3.467 23.155 8.253 1 48.47 ? O2' 5GP 302 A 1 HETATM 13 C C1' 5GP . . . C 3 -5.085 21.846 6.613 1 55.42 ? C1' 5GP 302 A 1 HETATM 14 N N9 5GP . . . C 3 -4.613 22.357 5.494 1 50.6 ? N9 5GP 302 A 1 HETATM 15 C C8 5GP . . . C 3 -3.629 23.301 5.341 1 47.59 ? C8 5GP 302 A 1 HETATM 16 N N7 5GP . . . C 3 -3.443 23.523 4.035 1 42.98 ? N7 5GP 302 A 1 HETATM 17 C C5 5GP . . . C 3 -4.302 22.743 3.344 1 42.62 ? C5 5GP 302 A 1 HETATM 18 C C6 5GP . . . C 3 -4.468 22.671 1.858 1 38.56 ? C6 5GP 302 A 1 HETATM 19 O O6 5GP . . . C 3 -3.754 23.432 1.246 1 32.62 ? O6 5GP 302 A 1 HETATM 20 N N1 5GP . . . C 3 -5.409 21.8 1.242 1 30.94 ? N1 5GP 302 A 1 HETATM 21 C C2 5GP . . . C 3 -6.191 20.983 2.108 1 38.51 ? C2 5GP 302 A 1 HETATM 22 N N2 5GP . . . C 3 -7.132 20.113 1.48 1 35.92 ? N2 5GP 302 A 1 HETATM 23 N N3 5GP . . . C 3 -6.027 21.079 3.569 1 45.89 ? N3 5GP 302 A 1 HETATM 24 C C4 5GP . . . C 3 -5.041 21.992 4.206 1 46.72 ? C4 5GP 302 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 24 #