data_6LPJ # _model_server_result.job_id yEQdaczxVQ0NxeA_UMw8Tg _model_server_result.datetime_utc '2024-11-05 08:22:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lpj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":2409}' # _entry.id 6LPJ # _exptl.entry_id 6LPJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 212.415 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PENTADECANE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LPJ _cell.length_a 40.4 _cell.length_b 178.9 _cell.length_c 142.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LPJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 H N N ? 6 J N N ? 6 O N N ? 6 R N N ? 6 Y N N ? 6 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 71 1_555 A SG CYS 184 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? disulf ? disulf2 A SG CYS 99 A CYS 74 1_555 A SG CYS 171 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.865 ? disulf ? disulf3 A SG CYS 102 A CYS 77 1_555 A SG CYS 191 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? disulf ? disulf4 A SG CYS 380 A CYS 259 1_555 A SG CYS 383 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc1 A OD1 ASP 77 A ASP 52 1_555 C NA NA . A NA 2402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc2 A OG SER 116 A SER 91 1_555 C NA NA . A NA 2402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc3 C NA NA . A NA 2402 1_555 CA O HOH . A HOH 2525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc4 C NA NA . A NA 2402 1_555 CA O HOH . A HOH 2547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc5 C NA NA . A NA 2402 1_555 CA O HOH . A HOH 2581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? # _chem_comp.formula 'C15 H32' _chem_comp.formula_weight 212.415 _chem_comp.id MYS _chem_comp.mon_nstd_flag . _chem_comp.name PENTADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MYS sing 538 n n C1 H11 MYS sing 539 n n C1 H12 MYS sing 540 n n C1 H13 MYS sing 541 n n C2 C3 MYS sing 542 n n C2 H21 MYS sing 543 n n C2 H22 MYS sing 544 n n C3 C4 MYS sing 545 n n C3 H31 MYS sing 546 n n C3 H32 MYS sing 547 n n C4 C5 MYS sing 548 n n C4 H41 MYS sing 549 n n C4 H42 MYS sing 550 n n C5 C6 MYS sing 551 n n C5 H51 MYS sing 552 n n C5 H52 MYS sing 553 n n C6 C7 MYS sing 554 n n C6 H61 MYS sing 555 n n C6 H62 MYS sing 556 n n C7 C8 MYS sing 557 n n C7 H71 MYS sing 558 n n C7 H72 MYS sing 559 n n C8 C9 MYS sing 560 n n C8 H81 MYS sing 561 n n C8 H82 MYS sing 562 n n C9 C10 MYS sing 563 n n C9 H91 MYS sing 564 n n C9 H92 MYS sing 565 n n C10 C11 MYS sing 566 n n C10 H101 MYS sing 567 n n C10 H102 MYS sing 568 n n C11 C12 MYS sing 569 n n C11 H111 MYS sing 570 n n C11 H112 MYS sing 571 n n C12 C13 MYS sing 572 n n C12 H121 MYS sing 573 n n C12 H122 MYS sing 574 n n C13 C14 MYS sing 575 n n C13 H131 MYS sing 576 n n C13 H132 MYS sing 577 n n C14 C15 MYS sing 578 n n C14 H141 MYS sing 579 n n C14 H142 MYS sing 580 n n C15 H151 MYS sing 581 n n C15 H152 MYS sing 582 n n C15 H153 MYS sing 583 n n # _atom_sites.entry_id 6LPJ _atom_sites.fract_transf_matrix[1][1] 0.024752 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00559 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007022 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZMA A 1 2401 2401 ZMA ZMA . C 3 NA A 1 2402 2402 NA NA . D 4 CLR A 1 2403 2403 CLR CLR . E 4 CLR A 1 2404 2404 CLR CLR . F 4 CLR A 1 2405 2405 CLR CLR . G 5 D12 A 1 2406 2406 D12 D12 . H 6 MYS A 1 2407 2407 MYS MYS . I 7 HEX A 1 2408 2408 HEX HEX . J 6 MYS A 1 2409 2409 MYS MYS . K 8 8K6 A 1 2410 2410 8K6 8K6 . L 9 D10 A 1 2411 2411 D10 D10 . M 10 OCT A 1 2412 2412 OCT OCT . N 10 OCT A 1 2413 2413 OCT OCT . O 6 MYS A 1 2414 2414 MYS MYS . P 11 UND A 1 2415 2415 UND UND . Q 12 ER0 A 1 2416 2416 ER0 ER0 . R 6 MYS A 1 2417 2417 MYS MYS . S 8 8K6 A 1 2418 2418 8K6 8K6 . T 8 8K6 A 1 2419 2419 8K6 8K6 . U 13 TRD A 1 2420 2420 TRD TRD . V 10 OCT A 1 2421 2422 OCT OCT . W 13 TRD A 1 2422 2423 TRD TRD . X 12 ER0 A 1 2423 2424 ER0 ER0 . Y 6 MYS A 1 2424 2425 MYS MYS . Z 13 TRD A 1 2425 2426 TRD TRD . AA 6 MYS A 1 2426 2427 MYS MYS . BA 13 TRD A 1 2427 2428 TRD TRD . CA 14 HOH A 1 2501 2681 HOH HOH . CA 14 HOH A 2 2502 2505 HOH HOH . CA 14 HOH A 3 2503 2601 HOH HOH . CA 14 HOH A 4 2504 2504 HOH HOH . CA 14 HOH A 5 2505 2594 HOH HOH . CA 14 HOH A 6 2506 2603 HOH HOH . CA 14 HOH A 7 2507 2508 HOH HOH . CA 14 HOH A 8 2508 2597 HOH HOH . CA 14 HOH A 9 2509 2664 HOH HOH . CA 14 HOH A 10 2510 2658 HOH HOH . CA 14 HOH A 11 2511 2536 HOH HOH . CA 14 HOH A 12 2512 2682 HOH HOH . CA 14 HOH A 13 2513 2575 HOH HOH . CA 14 HOH A 14 2514 2512 HOH HOH . CA 14 HOH A 15 2515 2562 HOH HOH . CA 14 HOH A 16 2516 2604 HOH HOH . CA 14 HOH A 17 2517 2585 HOH HOH . CA 14 HOH A 18 2518 2517 HOH HOH . CA 14 HOH A 19 2519 2563 HOH HOH . CA 14 HOH A 20 2520 2573 HOH HOH . CA 14 HOH A 21 2521 2549 HOH HOH . CA 14 HOH A 22 2522 2639 HOH HOH . CA 14 HOH A 23 2523 2530 HOH HOH . CA 14 HOH A 24 2524 2544 HOH HOH . CA 14 HOH A 25 2525 2529 HOH HOH . CA 14 HOH A 26 2526 2520 HOH HOH . CA 14 HOH A 27 2527 2571 HOH HOH . CA 14 HOH A 28 2528 2643 HOH HOH . CA 14 HOH A 29 2529 2678 HOH HOH . CA 14 HOH A 30 2530 2596 HOH HOH . CA 14 HOH A 31 2531 2513 HOH HOH . CA 14 HOH A 32 2532 2534 HOH HOH . CA 14 HOH A 33 2533 2567 HOH HOH . CA 14 HOH A 34 2534 2528 HOH HOH . CA 14 HOH A 35 2535 2533 HOH HOH . CA 14 HOH A 36 2536 2615 HOH HOH . CA 14 HOH A 37 2537 2565 HOH HOH . CA 14 HOH A 38 2538 2548 HOH HOH . CA 14 HOH A 39 2539 2558 HOH HOH . CA 14 HOH A 40 2540 2641 HOH HOH . CA 14 HOH A 41 2541 2514 HOH HOH . CA 14 HOH A 42 2542 2554 HOH HOH . CA 14 HOH A 43 2543 2515 HOH HOH . CA 14 HOH A 44 2544 2620 HOH HOH . CA 14 HOH A 45 2545 2532 HOH HOH . CA 14 HOH A 46 2546 2521 HOH HOH . CA 14 HOH A 47 2547 2552 HOH HOH . CA 14 HOH A 48 2548 2561 HOH HOH . CA 14 HOH A 49 2549 2516 HOH HOH . CA 14 HOH A 50 2550 2668 HOH HOH . CA 14 HOH A 51 2551 2531 HOH HOH . CA 14 HOH A 52 2552 2519 HOH HOH . CA 14 HOH A 53 2553 2654 HOH HOH . CA 14 HOH A 54 2554 2518 HOH HOH . CA 14 HOH A 55 2555 2629 HOH HOH . CA 14 HOH A 56 2556 2511 HOH HOH . CA 14 HOH A 57 2557 2583 HOH HOH . CA 14 HOH A 58 2558 2622 HOH HOH . CA 14 HOH A 59 2559 2522 HOH HOH . CA 14 HOH A 60 2560 2526 HOH HOH . CA 14 HOH A 61 2561 2572 HOH HOH . CA 14 HOH A 62 2562 2535 HOH HOH . CA 14 HOH A 63 2563 2527 HOH HOH . CA 14 HOH A 64 2564 2542 HOH HOH . CA 14 HOH A 65 2565 2684 HOH HOH . CA 14 HOH A 66 2566 2598 HOH HOH . CA 14 HOH A 67 2567 2666 HOH HOH . CA 14 HOH A 68 2568 2541 HOH HOH . CA 14 HOH A 69 2569 2608 HOH HOH . CA 14 HOH A 70 2570 2679 HOH HOH . CA 14 HOH A 71 2571 2543 HOH HOH . CA 14 HOH A 72 2572 2524 HOH HOH . CA 14 HOH A 73 2573 2683 HOH HOH . CA 14 HOH A 74 2574 2578 HOH HOH . CA 14 HOH A 75 2575 2523 HOH HOH . CA 14 HOH A 76 2576 2638 HOH HOH . CA 14 HOH A 77 2577 2553 HOH HOH . CA 14 HOH A 78 2578 2560 HOH HOH . CA 14 HOH A 79 2579 2525 HOH HOH . CA 14 HOH A 80 2580 2557 HOH HOH . CA 14 HOH A 81 2581 2579 HOH HOH . CA 14 HOH A 82 2582 2637 HOH HOH . CA 14 HOH A 83 2583 2546 HOH HOH . CA 14 HOH A 84 2584 2609 HOH HOH . CA 14 HOH A 85 2585 2539 HOH HOH . CA 14 HOH A 86 2586 2569 HOH HOH . CA 14 HOH A 87 2587 2564 HOH HOH . CA 14 HOH A 88 2588 2676 HOH HOH . CA 14 HOH A 89 2589 2577 HOH HOH . CA 14 HOH A 90 2590 2570 HOH HOH . CA 14 HOH A 91 2591 2559 HOH HOH . CA 14 HOH A 92 2592 2547 HOH HOH . CA 14 HOH A 93 2593 2566 HOH HOH . CA 14 HOH A 94 2594 2685 HOH HOH . CA 14 HOH A 95 2595 2576 HOH HOH . CA 14 HOH A 96 2596 2688 HOH HOH . CA 14 HOH A 97 2597 2556 HOH HOH . CA 14 HOH A 98 2598 2616 HOH HOH . CA 14 HOH A 99 2599 2581 HOH HOH . CA 14 HOH A 100 2600 2550 HOH HOH . CA 14 HOH A 101 2601 2618 HOH HOH . CA 14 HOH A 102 2602 2686 HOH HOH . CA 14 HOH A 103 2603 2537 HOH HOH . CA 14 HOH A 104 2604 2607 HOH HOH . CA 14 HOH A 105 2605 2680 HOH HOH . CA 14 HOH A 106 2606 2625 HOH HOH . CA 14 HOH A 107 2607 2510 HOH HOH . CA 14 HOH A 108 2608 2574 HOH HOH . CA 14 HOH A 109 2609 2645 HOH HOH . CA 14 HOH A 110 2610 2589 HOH HOH . CA 14 HOH A 111 2611 2592 HOH HOH . CA 14 HOH A 112 2612 2545 HOH HOH . CA 14 HOH A 113 2613 2584 HOH HOH . CA 14 HOH A 114 2614 2538 HOH HOH . CA 14 HOH A 115 2615 2652 HOH HOH . CA 14 HOH A 116 2616 2507 HOH HOH . CA 14 HOH A 117 2617 2655 HOH HOH . CA 14 HOH A 118 2618 2621 HOH HOH . CA 14 HOH A 119 2619 2689 HOH HOH . CA 14 HOH A 120 2620 2677 HOH HOH . CA 14 HOH A 121 2621 2614 HOH HOH . CA 14 HOH A 122 2622 2591 HOH HOH . CA 14 HOH A 123 2623 2687 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYS . . . J 6 -22.635 14.603 14.585 1 81.17 ? C1 MYS 2409 A 1 HETATM 2 C C2 MYS . . . J 6 -21.873 13.303 14.759 1 72.83 ? C2 MYS 2409 A 1 HETATM 3 C C3 MYS . . . J 6 -22.577 12.165 14.02 1 68.27 ? C3 MYS 2409 A 1 HETATM 4 C C4 MYS . . . J 6 -21.97 10.835 14.425 1 60.94 ? C4 MYS 2409 A 1 HETATM 5 C C5 MYS . . . J 6 -22.383 9.685 13.513 1 66.93 ? C5 MYS 2409 A 1 HETATM 6 C C6 MYS . . . J 6 -21.91 8.35 14.074 1 61.98 ? C6 MYS 2409 A 1 HETATM 7 C C7 MYS . . . J 6 -22.339 7.155 13.225 1 62.86 ? C7 MYS 2409 A 1 HETATM 8 C C8 MYS . . . J 6 -22.283 5.876 14.043 1 57.6 ? C8 MYS 2409 A 1 HETATM 9 C C9 MYS . . . J 6 -22.943 4.661 13.4 1 58.15 ? C9 MYS 2409 A 1 HETATM 10 C C10 MYS . . . J 6 -23.594 3.77 14.451 1 61.38 ? C10 MYS 2409 A 1 HETATM 11 C C11 MYS . . . J 6 -24.16 2.481 13.868 1 71.08 ? C11 MYS 2409 A 1 HETATM 12 C C12 MYS . . . J 6 -23.708 1.288 14.699 1 75.08 ? C12 MYS 2409 A 1 HETATM 13 C C13 MYS . . . J 6 -24.517 0.049 14.364 1 73.03 ? C13 MYS 2409 A 1 HETATM 14 C C14 MYS . . . J 6 -24.128 -1.12 15.275 1 75.61 ? C14 MYS 2409 A 1 HETATM 15 C C15 MYS . . . J 6 -25.223 -2.165 15.305 1 75.87 ? C15 MYS 2409 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 15 #