data_6LPJ
#
_model_server_result.job_id            tUAkuGrc6IYRBmEqA762Xg 
_model_server_result.datetime_utc      '2024-11-05 08:28:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6lpj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"T","auth_seq_id":2419}' 
#
_entry.id    6LPJ 
#
_exptl.entry_id    6LPJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              254.494 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Octadecane 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6LPJ 
_cell.length_a            40.4 
_cell.length_b            178.9 
_cell.length_c            142.4 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LPJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 8 K N N 
? 8 S N N 
? 8 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 96 A CYS 71 1_555 A SG CYS 184 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? 
disulf ? disulf2 A SG CYS 99 A CYS 74 1_555 A SG CYS 171 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.865 ? 
disulf ? disulf3 A SG CYS 102 A CYS 77 1_555 A SG CYS 191 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? 
disulf ? disulf4 A SG CYS 380 A CYS 259 1_555 A SG CYS 383 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? 
metalc ? metalc1 A OD1 ASP 77 A ASP 52 1_555 C NA NA . A NA 2402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? 
metalc ? metalc2 A OG SER 116 A SER 91 1_555 C NA NA . A NA 2402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? 
metalc ? metalc3 C NA NA . A NA 2402 1_555 CA O HOH . A HOH 2525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? 
metalc ? metalc4 C NA NA . A NA 2402 1_555 CA O HOH . A HOH 2547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? 
metalc ? metalc5 C NA NA . A NA 2402 1_555 CA O HOH . A HOH 2581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? 
#
_chem_comp.formula           'C18 H38' 
_chem_comp.formula_weight    254.494 
_chem_comp.id                8K6 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Octadecane 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     N-Octadecane 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 8K6 sing 1 n n 
C2 C3 8K6 sing 2 n n 
C3 C4 8K6 sing 3 n n 
C4 C5 8K6 sing 4 n n 
C5 C6 8K6 sing 5 n n 
C6 C7 8K6 sing 6 n n 
C7 C8 8K6 sing 7 n n 
C8 C9 8K6 sing 8 n n 
C9 C10 8K6 sing 9 n n 
C10 C11 8K6 sing 10 n n 
C11 C12 8K6 sing 11 n n 
C12 C13 8K6 sing 12 n n 
C13 C14 8K6 sing 13 n n 
C14 C15 8K6 sing 14 n n 
C15 C16 8K6 sing 15 n n 
C16 C17 8K6 sing 16 n n 
C17 C18 8K6 sing 17 n n 
C1 H11C 8K6 sing 18 n n 
C1 H12C 8K6 sing 19 n n 
C1 H13C 8K6 sing 20 n n 
C2 H21C 8K6 sing 21 n n 
C2 H22C 8K6 sing 22 n n 
C3 H31C 8K6 sing 23 n n 
C3 H32C 8K6 sing 24 n n 
C4 H41C 8K6 sing 25 n n 
C4 H42C 8K6 sing 26 n n 
C5 H51C 8K6 sing 27 n n 
C5 H52C 8K6 sing 28 n n 
C6 H61C 8K6 sing 29 n n 
C6 H62C 8K6 sing 30 n n 
C7 H71C 8K6 sing 31 n n 
C7 H72C 8K6 sing 32 n n 
C8 H81C 8K6 sing 33 n n 
C8 H82C 8K6 sing 34 n n 
C9 H91C 8K6 sing 35 n n 
C9 H92C 8K6 sing 36 n n 
C10 H101 8K6 sing 37 n n 
C10 H102 8K6 sing 38 n n 
C11 H111 8K6 sing 39 n n 
C11 H112 8K6 sing 40 n n 
C12 H121 8K6 sing 41 n n 
C12 H122 8K6 sing 42 n n 
C13 H131 8K6 sing 43 n n 
C13 H132 8K6 sing 44 n n 
C14 H141 8K6 sing 45 n n 
C14 H142 8K6 sing 46 n n 
C15 H151 8K6 sing 47 n n 
C15 H152 8K6 sing 48 n n 
C16 H161 8K6 sing 49 n n 
C16 H162 8K6 sing 50 n n 
C17 H171 8K6 sing 51 n n 
C17 H172 8K6 sing 52 n n 
C18 H181 8K6 sing 53 n n 
C18 H182 8K6 sing 54 n n 
C18 H183 8K6 sing 55 n n 
#
_atom_sites.entry_id                     6LPJ 
_atom_sites.fract_transf_matrix[1][1]    0.024752 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00559 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007022 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZMA A 1 2401 2401 ZMA ZMA . 
C 3 NA A 1 2402 2402 NA NA . 
D 4 CLR A 1 2403 2403 CLR CLR . 
E 4 CLR A 1 2404 2404 CLR CLR . 
F 4 CLR A 1 2405 2405 CLR CLR . 
G 5 D12 A 1 2406 2406 D12 D12 . 
H 6 MYS A 1 2407 2407 MYS MYS . 
I 7 HEX A 1 2408 2408 HEX HEX . 
J 6 MYS A 1 2409 2409 MYS MYS . 
K 8 8K6 A 1 2410 2410 8K6 8K6 . 
L 9 D10 A 1 2411 2411 D10 D10 . 
M 10 OCT A 1 2412 2412 OCT OCT . 
N 10 OCT A 1 2413 2413 OCT OCT . 
O 6 MYS A 1 2414 2414 MYS MYS . 
P 11 UND A 1 2415 2415 UND UND . 
Q 12 ER0 A 1 2416 2416 ER0 ER0 . 
R 6 MYS A 1 2417 2417 MYS MYS . 
S 8 8K6 A 1 2418 2418 8K6 8K6 . 
T 8 8K6 A 1 2419 2419 8K6 8K6 . 
U 13 TRD A 1 2420 2420 TRD TRD . 
V 10 OCT A 1 2421 2422 OCT OCT . 
W 13 TRD A 1 2422 2423 TRD TRD . 
X 12 ER0 A 1 2423 2424 ER0 ER0 . 
Y 6 MYS A 1 2424 2425 MYS MYS . 
Z 13 TRD A 1 2425 2426 TRD TRD . 
AA 6 MYS A 1 2426 2427 MYS MYS . 
BA 13 TRD A 1 2427 2428 TRD TRD . 
CA 14 HOH A 1 2501 2681 HOH HOH . 
CA 14 HOH A 2 2502 2505 HOH HOH . 
CA 14 HOH A 3 2503 2601 HOH HOH . 
CA 14 HOH A 4 2504 2504 HOH HOH . 
CA 14 HOH A 5 2505 2594 HOH HOH . 
CA 14 HOH A 6 2506 2603 HOH HOH . 
CA 14 HOH A 7 2507 2508 HOH HOH . 
CA 14 HOH A 8 2508 2597 HOH HOH . 
CA 14 HOH A 9 2509 2664 HOH HOH . 
CA 14 HOH A 10 2510 2658 HOH HOH . 
CA 14 HOH A 11 2511 2536 HOH HOH . 
CA 14 HOH A 12 2512 2682 HOH HOH . 
CA 14 HOH A 13 2513 2575 HOH HOH . 
CA 14 HOH A 14 2514 2512 HOH HOH . 
CA 14 HOH A 15 2515 2562 HOH HOH . 
CA 14 HOH A 16 2516 2604 HOH HOH . 
CA 14 HOH A 17 2517 2585 HOH HOH . 
CA 14 HOH A 18 2518 2517 HOH HOH . 
CA 14 HOH A 19 2519 2563 HOH HOH . 
CA 14 HOH A 20 2520 2573 HOH HOH . 
CA 14 HOH A 21 2521 2549 HOH HOH . 
CA 14 HOH A 22 2522 2639 HOH HOH . 
CA 14 HOH A 23 2523 2530 HOH HOH . 
CA 14 HOH A 24 2524 2544 HOH HOH . 
CA 14 HOH A 25 2525 2529 HOH HOH . 
CA 14 HOH A 26 2526 2520 HOH HOH . 
CA 14 HOH A 27 2527 2571 HOH HOH . 
CA 14 HOH A 28 2528 2643 HOH HOH . 
CA 14 HOH A 29 2529 2678 HOH HOH . 
CA 14 HOH A 30 2530 2596 HOH HOH . 
CA 14 HOH A 31 2531 2513 HOH HOH . 
CA 14 HOH A 32 2532 2534 HOH HOH . 
CA 14 HOH A 33 2533 2567 HOH HOH . 
CA 14 HOH A 34 2534 2528 HOH HOH . 
CA 14 HOH A 35 2535 2533 HOH HOH . 
CA 14 HOH A 36 2536 2615 HOH HOH . 
CA 14 HOH A 37 2537 2565 HOH HOH . 
CA 14 HOH A 38 2538 2548 HOH HOH . 
CA 14 HOH A 39 2539 2558 HOH HOH . 
CA 14 HOH A 40 2540 2641 HOH HOH . 
CA 14 HOH A 41 2541 2514 HOH HOH . 
CA 14 HOH A 42 2542 2554 HOH HOH . 
CA 14 HOH A 43 2543 2515 HOH HOH . 
CA 14 HOH A 44 2544 2620 HOH HOH . 
CA 14 HOH A 45 2545 2532 HOH HOH . 
CA 14 HOH A 46 2546 2521 HOH HOH . 
CA 14 HOH A 47 2547 2552 HOH HOH . 
CA 14 HOH A 48 2548 2561 HOH HOH . 
CA 14 HOH A 49 2549 2516 HOH HOH . 
CA 14 HOH A 50 2550 2668 HOH HOH . 
CA 14 HOH A 51 2551 2531 HOH HOH . 
CA 14 HOH A 52 2552 2519 HOH HOH . 
CA 14 HOH A 53 2553 2654 HOH HOH . 
CA 14 HOH A 54 2554 2518 HOH HOH . 
CA 14 HOH A 55 2555 2629 HOH HOH . 
CA 14 HOH A 56 2556 2511 HOH HOH . 
CA 14 HOH A 57 2557 2583 HOH HOH . 
CA 14 HOH A 58 2558 2622 HOH HOH . 
CA 14 HOH A 59 2559 2522 HOH HOH . 
CA 14 HOH A 60 2560 2526 HOH HOH . 
CA 14 HOH A 61 2561 2572 HOH HOH . 
CA 14 HOH A 62 2562 2535 HOH HOH . 
CA 14 HOH A 63 2563 2527 HOH HOH . 
CA 14 HOH A 64 2564 2542 HOH HOH . 
CA 14 HOH A 65 2565 2684 HOH HOH . 
CA 14 HOH A 66 2566 2598 HOH HOH . 
CA 14 HOH A 67 2567 2666 HOH HOH . 
CA 14 HOH A 68 2568 2541 HOH HOH . 
CA 14 HOH A 69 2569 2608 HOH HOH . 
CA 14 HOH A 70 2570 2679 HOH HOH . 
CA 14 HOH A 71 2571 2543 HOH HOH . 
CA 14 HOH A 72 2572 2524 HOH HOH . 
CA 14 HOH A 73 2573 2683 HOH HOH . 
CA 14 HOH A 74 2574 2578 HOH HOH . 
CA 14 HOH A 75 2575 2523 HOH HOH . 
CA 14 HOH A 76 2576 2638 HOH HOH . 
CA 14 HOH A 77 2577 2553 HOH HOH . 
CA 14 HOH A 78 2578 2560 HOH HOH . 
CA 14 HOH A 79 2579 2525 HOH HOH . 
CA 14 HOH A 80 2580 2557 HOH HOH . 
CA 14 HOH A 81 2581 2579 HOH HOH . 
CA 14 HOH A 82 2582 2637 HOH HOH . 
CA 14 HOH A 83 2583 2546 HOH HOH . 
CA 14 HOH A 84 2584 2609 HOH HOH . 
CA 14 HOH A 85 2585 2539 HOH HOH . 
CA 14 HOH A 86 2586 2569 HOH HOH . 
CA 14 HOH A 87 2587 2564 HOH HOH . 
CA 14 HOH A 88 2588 2676 HOH HOH . 
CA 14 HOH A 89 2589 2577 HOH HOH . 
CA 14 HOH A 90 2590 2570 HOH HOH . 
CA 14 HOH A 91 2591 2559 HOH HOH . 
CA 14 HOH A 92 2592 2547 HOH HOH . 
CA 14 HOH A 93 2593 2566 HOH HOH . 
CA 14 HOH A 94 2594 2685 HOH HOH . 
CA 14 HOH A 95 2595 2576 HOH HOH . 
CA 14 HOH A 96 2596 2688 HOH HOH . 
CA 14 HOH A 97 2597 2556 HOH HOH . 
CA 14 HOH A 98 2598 2616 HOH HOH . 
CA 14 HOH A 99 2599 2581 HOH HOH . 
CA 14 HOH A 100 2600 2550 HOH HOH . 
CA 14 HOH A 101 2601 2618 HOH HOH . 
CA 14 HOH A 102 2602 2686 HOH HOH . 
CA 14 HOH A 103 2603 2537 HOH HOH . 
CA 14 HOH A 104 2604 2607 HOH HOH . 
CA 14 HOH A 105 2605 2680 HOH HOH . 
CA 14 HOH A 106 2606 2625 HOH HOH . 
CA 14 HOH A 107 2607 2510 HOH HOH . 
CA 14 HOH A 108 2608 2574 HOH HOH . 
CA 14 HOH A 109 2609 2645 HOH HOH . 
CA 14 HOH A 110 2610 2589 HOH HOH . 
CA 14 HOH A 111 2611 2592 HOH HOH . 
CA 14 HOH A 112 2612 2545 HOH HOH . 
CA 14 HOH A 113 2613 2584 HOH HOH . 
CA 14 HOH A 114 2614 2538 HOH HOH . 
CA 14 HOH A 115 2615 2652 HOH HOH . 
CA 14 HOH A 116 2616 2507 HOH HOH . 
CA 14 HOH A 117 2617 2655 HOH HOH . 
CA 14 HOH A 118 2618 2621 HOH HOH . 
CA 14 HOH A 119 2619 2689 HOH HOH . 
CA 14 HOH A 120 2620 2677 HOH HOH . 
CA 14 HOH A 121 2621 2614 HOH HOH . 
CA 14 HOH A 122 2622 2591 HOH HOH . 
CA 14 HOH A 123 2623 2687 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 8K6 . . . T 8 1.922 -11.762 3.775 1 89.61 ? C1 8K6 2419 A 1 
HETATM 2 C C2 8K6 . . . T 8 3.239 -12.482 3.925 1 87.19 ? C2 8K6 2419 A 1 
HETATM 3 C C3 8K6 . . . T 8 3.183 -13.933 3.495 1 93.8 ? C3 8K6 2419 A 1 
HETATM 4 C C4 8K6 . . . T 8 4.488 -14.678 3.688 1 93.14 ? C4 8K6 2419 A 1 
HETATM 5 C C5 8K6 . . . T 8 4.334 -16.19 3.883 1 94.83 ? C5 8K6 2419 A 1 
HETATM 6 C C6 8K6 . . . T 8 5.437 -16.836 4.729 1 96.82 ? C6 8K6 2419 A 1 
HETATM 7 C C7 8K6 . . . T 8 6.544 -15.874 5.163 1 99.75 ? C7 8K6 2419 A 1 
HETATM 8 C C8 8K6 . . . T 8 7.859 -16.547 5.521 1 97.96 ? C8 8K6 2419 A 1 
HETATM 9 C C9 8K6 . . . T 8 9.068 -15.626 5.45 1 94.39 ? C9 8K6 2419 A 1 
HETATM 10 C C10 8K6 . . . T 8 8.867 -14.272 6.121 1 93.64 ? C10 8K6 2419 A 1 
HETATM 11 C C11 8K6 . . . T 8 9.696 -14.07 7.368 1 90.31 ? C11 8K6 2419 A 1 
HETATM 12 C C12 8K6 . . . T 8 9.011 -13.25 8.44 1 85.41 ? C12 8K6 2419 A 1 
HETATM 13 C C13 8K6 . . . T 8 9.946 -12.7 9.488 1 81.46 ? C13 8K6 2419 A 1 
HETATM 14 C C14 8K6 . . . T 8 10.073 -11.195 9.47 1 80.8 ? C14 8K6 2419 A 1 
HETATM 15 C C15 8K6 . . . T 8 11.239 -10.666 10.272 1 85.48 ? C15 8K6 2419 A 1 
HETATM 16 C C16 8K6 . . . T 8 10.886 -9.532 11.206 1 85.4 ? C16 8K6 2419 A 1 
HETATM 17 C C17 8K6 . . . T 8 11.882 -9.327 12.342 1 86.45 ? C17 8K6 2419 A 1 
HETATM 18 C C18 8K6 . . . T 8 12.222 -7.863 12.6 1 87.94 ? C18 8K6 2419 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           18 
#