data_6LPQ
#
_model_server_result.job_id            q1AfM6x8433M0D-NApj2MQ 
_model_server_result.datetime_utc      '2024-12-03 12:29:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6lpq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":601}' 
#
_entry.id    6LPQ 
#
_exptl.entry_id    6LPQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.55 
_cell.angle_gamma         90 
_cell.entry_id            6LPQ 
_cell.length_a            72.615 
_cell.length_b            94.569 
_cell.length_c            73.673 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6LPQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 388 A HIS 434 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? 
metalc ? metalc2 A NE2 HIS 395 A HIS 441 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? 
metalc ? metalc3 A OE1 GLU 429 A GLU 475 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? 
metalc ? metalc4 D ZN ZN . A ZN 602 1_555 E O2 MLT . A MLT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
metalc ? metalc5 D ZN ZN . A ZN 602 1_555 E O3 MLT . A MLT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc6 B NE2 HIS 388 B HIS 434 1_555 G ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc7 B NE2 HIS 395 B HIS 441 1_555 G ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? 
metalc ? metalc8 B OE1 GLU 429 B GLU 475 1_555 G ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
metalc ? metalc9 G ZN ZN . B ZN 602 1_555 H O1 MLT . B MLT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
metalc ? metalc10 G ZN ZN . B ZN 602 1_555 H O3 MLT . B MLT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     6LPQ 
_atom_sites.fract_transf_matrix[1][1]    0.013771 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005439 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010574 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014594 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 601 1 FAD FAD . 
D 3 ZN A 1 602 1 ZN ZN . 
E 4 MLT A 1 603 1 MLT MLT . 
F 2 FAD B 1 601 2 FAD FAD . 
G 3 ZN B 1 602 2 ZN ZN . 
H 4 MLT B 1 603 2 MLT MLT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . F 2 242.581 -64.503 15.813 1 19.13 ? PA FAD 601 B 1 
HETATM 2 O O1A FAD . . . F 2 243.241 -63.26 16.27 1 21.5 ? O1A FAD 601 B 1 
HETATM 3 O O2A FAD . . . F 2 243.525 -65.685 15.585 1 21.09 ? O2A FAD 601 B 1 
HETATM 4 O O5B FAD . . . F 2 241.725 -64.266 14.519 1 21.05 ? O5B FAD 601 B 1 
HETATM 5 C C5B FAD . . . F 2 241.02 -65.351 13.878 1 20.21 ? C5B FAD 601 B 1 
HETATM 6 C C4B FAD . . . F 2 240.138 -64.822 12.772 1 21.7 ? C4B FAD 601 B 1 
HETATM 7 O O4B FAD . . . F 2 239.046 -64.06 13.333 1 22.09 ? O4B FAD 601 B 1 
HETATM 8 C C3B FAD . . . F 2 240.821 -63.899 11.768 1 25.99 ? C3B FAD 601 B 1 
HETATM 9 O O3B FAD . . . F 2 240.299 -64.099 10.459 1 28.11 ? O3B FAD 601 B 1 
HETATM 10 C C2B FAD . . . F 2 240.515 -62.505 12.327 1 23.05 ? C2B FAD 601 B 1 
HETATM 11 O O2B FAD . . . F 2 240.505 -61.505 11.314 1 26.73 ? O2B FAD 601 B 1 
HETATM 12 C C1B FAD . . . F 2 239.118 -62.709 12.915 1 24.81 ? C1B FAD 601 B 1 
HETATM 13 N N9A FAD . . . F 2 238.822 -61.862 14.068 1 23.88 ? N9A FAD 601 B 1 
HETATM 14 C C8A FAD . . . F 2 239.513 -61.807 15.25 1 21.92 ? C8A FAD 601 B 1 
HETATM 15 N N7A FAD . . . F 2 239.017 -60.962 16.122 1 18.02 ? N7A FAD 601 B 1 
HETATM 16 C C5A FAD . . . F 2 237.918 -60.425 15.469 1 18.08 ? C5A FAD 601 B 1 
HETATM 17 C C6A FAD . . . F 2 236.961 -59.466 15.852 1 23.05 ? C6A FAD 601 B 1 
HETATM 18 N N6A FAD . . . F 2 236.959 -58.85 17.038 1 20.2 ? N6A FAD 601 B 1 
HETATM 19 N N1A FAD . . . F 2 235.992 -59.156 14.961 1 26.46 ? N1A FAD 601 B 1 
HETATM 20 C C2A FAD . . . F 2 235.99 -59.767 13.774 1 24.87 ? C2A FAD 601 B 1 
HETATM 21 N N3A FAD . . . F 2 236.839 -60.683 13.302 1 21.39 ? N3A FAD 601 B 1 
HETATM 22 C C4A FAD . . . F 2 237.785 -60.971 14.203 1 19.91 ? C4A FAD 601 B 1 
HETATM 23 N N1 FAD . . . F 2 239.611 -73.617 17.795 1 28.24 ? N1 FAD 601 B 1 
HETATM 24 C C2 FAD . . . F 2 238.459 -74.291 18.077 1 30.09 ? C2 FAD 601 B 1 
HETATM 25 O O2 FAD . . . F 2 237.428 -74.117 17.421 1 33.49 ? O2 FAD 601 B 1 
HETATM 26 N N3 FAD . . . F 2 238.438 -75.202 19.114 1 29.78 ? N3 FAD 601 B 1 
HETATM 27 C C4 FAD . . . F 2 239.493 -75.515 19.939 1 32.42 ? C4 FAD 601 B 1 
HETATM 28 O O4 FAD . . . F 2 239.353 -76.348 20.834 1 33.53 ? O4 FAD 601 B 1 
HETATM 29 C C4X FAD . . . F 2 240.71 -74.784 19.641 1 32.06 ? C4X FAD 601 B 1 
HETATM 30 N N5 FAD . . . F 2 241.755 -75.017 20.378 1 32.09 ? N5 FAD 601 B 1 
HETATM 31 C C5X FAD . . . F 2 242.921 -74.33 20.094 1 24.5 ? C5X FAD 601 B 1 
HETATM 32 C C6 FAD . . . F 2 244.045 -74.579 20.876 1 23.17 ? C6 FAD 601 B 1 
HETATM 33 C C7 FAD . . . F 2 245.242 -73.914 20.64 1 28.31 ? C7 FAD 601 B 1 
HETATM 34 C C7M FAD . . . F 2 246.436 -74.21 21.509 1 28.59 ? C7M FAD 601 B 1 
HETATM 35 C C8 FAD . . . F 2 245.32 -72.976 19.597 1 25.34 ? C8 FAD 601 B 1 
HETATM 36 C C8M FAD . . . F 2 246.601 -72.237 19.317 1 23.19 ? C8M FAD 601 B 1 
HETATM 37 C C9 FAD . . . F 2 244.198 -72.724 18.812 1 25.95 ? C9 FAD 601 B 1 
HETATM 38 C C9A FAD . . . F 2 243.002 -73.392 19.053 1 25.47 ? C9A FAD 601 B 1 
HETATM 39 N N10 FAD . . . F 2 241.844 -73.154 18.285 1 22.69 ? N10 FAD 601 B 1 
HETATM 40 C C10 FAD . . . F 2 240.674 -73.848 18.548 1 25.25 ? C10 FAD 601 B 1 
HETATM 41 C C1' FAD . . . F 2 241.877 -72.19 17.164 1 27.42 ? C1' FAD 601 B 1 
HETATM 42 C C2' FAD . . . F 2 240.854 -71.063 17.286 1 28.21 ? C2' FAD 601 B 1 
HETATM 43 O O2' FAD . . . F 2 240.412 -70.643 15.994 1 29.49 ? O2' FAD 601 B 1 
HETATM 44 C C3' FAD . . . F 2 241.478 -69.874 18.012 1 27.42 ? C3' FAD 601 B 1 
HETATM 45 O O3' FAD . . . F 2 242.166 -70.336 19.169 1 25.21 ? O3' FAD 601 B 1 
HETATM 46 C C4' FAD . . . F 2 240.436 -68.832 18.419 1 26.87 ? C4' FAD 601 B 1 
HETATM 47 O O4' FAD . . . F 2 239.129 -69.355 18.182 1 21.1 ? O4' FAD 601 B 1 
HETATM 48 C C5' FAD . . . F 2 240.592 -67.531 17.665 1 25.27 ? C5' FAD 601 B 1 
HETATM 49 O O5' FAD . . . F 2 240.704 -66.453 18.616 1 21.62 ? O5' FAD 601 B 1 
HETATM 50 P P FAD . . . F 2 241.718 -65.279 18.388 1 24.21 ? P FAD 601 B 1 
HETATM 51 O O1P FAD . . . F 2 241.277 -64.063 19.21 1 23.03 ? O1P FAD 601 B 1 
HETATM 52 O O2P FAD . . . F 2 243.102 -65.76 18.593 1 24.39 ? O2P FAD 601 B 1 
HETATM 53 O O3P FAD . . . F 2 241.477 -64.948 16.86 1 22.06 ? O3P FAD 601 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           38 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          16 
_model_server_stats.element_count           53 
#