data_6LR9 # _model_server_result.job_id JGx4xXiJjDB9gGYV1_VyKg _model_server_result.datetime_utc '2024-11-04 20:57:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lr9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6LR9 # _exptl.entry_id 6LR9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 442.578 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[[6-(dimethylamino)-1,3-benzodioxol-5-yl]sulfanyl]-1-[2-(2,2-dimethylpropylamino)ethyl]imidazo[4,5-c]pyridin-4-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LR9 _cell.length_a 67.454 _cell.length_b 89.867 _cell.length_c 97.495 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LR9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H30 N6 O2 S' _chem_comp.formula_weight 442.578 _chem_comp.id EOR _chem_comp.mon_nstd_flag . _chem_comp.name 2-[[6-(dimethylamino)-1,3-benzodioxol-5-yl]sulfanyl]-1-[2-(2,2-dimethylpropylamino)ethyl]imidazo[4,5-c]pyridin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C29 C28 EOR sing 70 n n C20 C21 EOR doub 71 n y C20 N19 EOR sing 72 n y C21 C22 EOR sing 73 n y C28 C30 EOR sing 74 n n C28 C31 EOR sing 75 n n C28 C27 EOR sing 76 n n N19 C17 EOR doub 77 n y N26 C27 EOR sing 78 n n N26 C25 EOR sing 79 n n C24 C25 EOR sing 80 n n C24 N23 EOR sing 81 n n C22 N23 EOR sing 82 n y C22 C16 EOR doub 83 n y C08 O09 EOR sing 84 n n C08 O07 EOR sing 85 n n O09 C10 EOR sing 86 n n N23 C14 EOR sing 87 n y C17 C16 EOR sing 88 n y C17 N18 EOR sing 89 n n O07 C06 EOR sing 90 n n C16 N15 EOR sing 91 n y C10 C06 EOR doub 92 n y C10 C11 EOR sing 93 n y C06 C05 EOR sing 94 n y C11 C12 EOR doub 95 n y C14 N15 EOR doub 96 n y C14 S13 EOR sing 97 n n C05 C04 EOR doub 98 n y C12 C04 EOR sing 99 n y C12 S13 EOR sing 100 n n C04 N02 EOR sing 101 n n C01 N02 EOR sing 102 n n N02 C03 EOR sing 103 n n C11 H1 EOR sing 104 n n C20 H2 EOR sing 105 n n C25 H3 EOR sing 106 n n C25 H4 EOR sing 107 n n C27 H5 EOR sing 108 n n C27 H6 EOR sing 109 n n C01 H7 EOR sing 110 n n C01 H8 EOR sing 111 n n C01 H9 EOR sing 112 n n C03 H10 EOR sing 113 n n C03 H11 EOR sing 114 n n C03 H12 EOR sing 115 n n C05 H13 EOR sing 116 n n C08 H14 EOR sing 117 n n C21 H15 EOR sing 118 n n C24 H16 EOR sing 119 n n C24 H17 EOR sing 120 n n C29 H18 EOR sing 121 n n C29 H19 EOR sing 122 n n C29 H20 EOR sing 123 n n C30 H21 EOR sing 124 n n C30 H22 EOR sing 125 n n C30 H23 EOR sing 126 n n C31 H24 EOR sing 127 n n C31 H25 EOR sing 128 n n C31 H26 EOR sing 129 n n N18 H27 EOR sing 130 n n N18 H28 EOR sing 131 n n N26 H29 EOR sing 132 n n C08 H31 EOR sing 133 n n # _atom_sites.entry_id 6LR9 _atom_sites.fract_transf_matrix[1][1] 0.014825 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011128 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010257 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EOR A 1 301 227 EOR DEB . C 3 GOL A 1 302 228 GOL GOL . D 4 HOH A 1 401 44 HOH HOH . D 4 HOH A 2 402 36 HOH HOH . D 4 HOH A 3 403 75 HOH HOH . D 4 HOH A 4 404 64 HOH HOH . D 4 HOH A 5 405 107 HOH HOH . D 4 HOH A 6 406 121 HOH HOH . D 4 HOH A 7 407 110 HOH HOH . D 4 HOH A 8 408 80 HOH HOH . D 4 HOH A 9 409 85 HOH HOH . D 4 HOH A 10 410 28 HOH HOH . D 4 HOH A 11 411 12 HOH HOH . D 4 HOH A 12 412 26 HOH HOH . D 4 HOH A 13 413 104 HOH HOH . D 4 HOH A 14 414 76 HOH HOH . D 4 HOH A 15 415 2 HOH HOH . D 4 HOH A 16 416 23 HOH HOH . D 4 HOH A 17 417 40 HOH HOH . D 4 HOH A 18 418 59 HOH HOH . D 4 HOH A 19 419 54 HOH HOH . D 4 HOH A 20 420 10 HOH HOH . D 4 HOH A 21 421 34 HOH HOH . D 4 HOH A 22 422 86 HOH HOH . D 4 HOH A 23 423 16 HOH HOH . D 4 HOH A 24 424 66 HOH HOH . D 4 HOH A 25 425 25 HOH HOH . D 4 HOH A 26 426 21 HOH HOH . D 4 HOH A 27 427 57 HOH HOH . D 4 HOH A 28 428 15 HOH HOH . D 4 HOH A 29 429 3 HOH HOH . D 4 HOH A 30 430 13 HOH HOH . D 4 HOH A 31 431 90 HOH HOH . D 4 HOH A 32 432 62 HOH HOH . D 4 HOH A 33 433 102 HOH HOH . D 4 HOH A 34 434 39 HOH HOH . D 4 HOH A 35 435 55 HOH HOH . D 4 HOH A 36 436 4 HOH HOH . D 4 HOH A 37 437 24 HOH HOH . D 4 HOH A 38 438 38 HOH HOH . D 4 HOH A 39 439 20 HOH HOH . D 4 HOH A 40 440 45 HOH HOH . D 4 HOH A 41 441 9 HOH HOH . D 4 HOH A 42 442 95 HOH HOH . D 4 HOH A 43 443 32 HOH HOH . D 4 HOH A 44 444 60 HOH HOH . D 4 HOH A 45 445 96 HOH HOH . D 4 HOH A 46 446 35 HOH HOH . D 4 HOH A 47 447 53 HOH HOH . D 4 HOH A 48 448 31 HOH HOH . D 4 HOH A 49 449 115 HOH HOH . D 4 HOH A 50 450 122 HOH HOH . D 4 HOH A 51 451 37 HOH HOH . D 4 HOH A 52 452 58 HOH HOH . D 4 HOH A 53 453 87 HOH HOH . D 4 HOH A 54 454 91 HOH HOH . D 4 HOH A 55 455 77 HOH HOH . D 4 HOH A 56 456 68 HOH HOH . D 4 HOH A 57 457 69 HOH HOH . D 4 HOH A 58 458 30 HOH HOH . D 4 HOH A 59 459 124 HOH HOH . D 4 HOH A 60 460 27 HOH HOH . D 4 HOH A 61 461 106 HOH HOH . D 4 HOH A 62 462 84 HOH HOH . D 4 HOH A 63 463 22 HOH HOH . D 4 HOH A 64 464 73 HOH HOH . D 4 HOH A 65 465 78 HOH HOH . D 4 HOH A 66 466 89 HOH HOH . D 4 HOH A 67 467 1 HOH HOH . D 4 HOH A 68 468 61 HOH HOH . D 4 HOH A 69 469 7 HOH HOH . D 4 HOH A 70 470 108 HOH HOH . D 4 HOH A 71 471 11 HOH HOH . D 4 HOH A 72 472 5 HOH HOH . D 4 HOH A 73 473 88 HOH HOH . D 4 HOH A 74 474 120 HOH HOH . D 4 HOH A 75 475 99 HOH HOH . D 4 HOH A 76 476 83 HOH HOH . D 4 HOH A 77 477 48 HOH HOH . D 4 HOH A 78 478 74 HOH HOH . D 4 HOH A 79 479 113 HOH HOH . D 4 HOH A 80 480 128 HOH HOH . D 4 HOH A 81 481 97 HOH HOH . D 4 HOH A 82 482 65 HOH HOH . D 4 HOH A 83 483 70 HOH HOH . D 4 HOH A 84 484 8 HOH HOH . D 4 HOH A 85 485 33 HOH HOH . D 4 HOH A 86 486 105 HOH HOH . D 4 HOH A 87 487 49 HOH HOH . D 4 HOH A 88 488 50 HOH HOH . D 4 HOH A 89 489 6 HOH HOH . D 4 HOH A 90 490 19 HOH HOH . D 4 HOH A 91 491 29 HOH HOH . D 4 HOH A 92 492 14 HOH HOH . D 4 HOH A 93 493 93 HOH HOH . D 4 HOH A 94 494 42 HOH HOH . D 4 HOH A 95 495 103 HOH HOH . D 4 HOH A 96 496 81 HOH HOH . D 4 HOH A 97 497 116 HOH HOH . D 4 HOH A 98 498 101 HOH HOH . D 4 HOH A 99 499 52 HOH HOH . D 4 HOH A 100 500 109 HOH HOH . D 4 HOH A 101 501 67 HOH HOH . D 4 HOH A 102 502 18 HOH HOH . D 4 HOH A 103 503 46 HOH HOH . D 4 HOH A 104 504 71 HOH HOH . D 4 HOH A 105 505 92 HOH HOH . D 4 HOH A 106 506 51 HOH HOH . D 4 HOH A 107 507 47 HOH HOH . D 4 HOH A 108 508 63 HOH HOH . D 4 HOH A 109 509 17 HOH HOH . D 4 HOH A 110 510 79 HOH HOH . D 4 HOH A 111 511 41 HOH HOH . D 4 HOH A 112 512 82 HOH HOH . D 4 HOH A 113 513 56 HOH HOH . D 4 HOH A 114 514 43 HOH HOH . D 4 HOH A 115 515 119 HOH HOH . D 4 HOH A 116 516 125 HOH HOH . D 4 HOH A 117 517 72 HOH HOH . D 4 HOH A 118 518 117 HOH HOH . D 4 HOH A 119 519 94 HOH HOH . D 4 HOH A 120 520 118 HOH HOH . D 4 HOH A 121 521 112 HOH HOH . D 4 HOH A 122 522 127 HOH HOH . D 4 HOH A 123 523 114 HOH HOH . D 4 HOH A 124 524 100 HOH HOH . D 4 HOH A 125 525 130 HOH HOH . D 4 HOH A 126 526 111 HOH HOH . D 4 HOH A 127 527 123 HOH HOH . D 4 HOH A 128 528 129 HOH HOH . D 4 HOH A 129 529 126 HOH HOH . D 4 HOH A 130 530 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 EOR . . . B 2 5.027 31.285 24.08 1 30.27 ? C10 EOR 301 A 1 HETATM 2 C C11 EOR . . . B 2 4.154 32.277 24.588 1 26.84 ? C11 EOR 301 A 1 HETATM 3 C C12 EOR . . . B 2 4.665 33.406 25.215 1 28.54 ? C12 EOR 301 A 1 HETATM 4 C C14 EOR . . . B 2 2.028 34.635 24.701 1 26.68 ? C14 EOR 301 A 1 HETATM 5 C C20 EOR . . . B 2 -1.065 34.986 21.398 1 24.86 ? C20 EOR 301 A 1 HETATM 6 C C22 EOR . . . B 2 0.835 34.988 22.903 1 20.24 ? C22 EOR 301 A 1 HETATM 7 C C25 EOR . . . B 2 3.233 37.31 23.183 1 28.23 ? C25 EOR 301 A 1 HETATM 8 C C27 EOR . . . B 2 2.154 39.411 22.84 1 29.08 ? C27 EOR 301 A 1 HETATM 9 C C01 EOR . . . B 2 6.278 36.032 25.484 1 33.23 ? C01 EOR 301 A 1 HETATM 10 C C03 EOR . . . B 2 7.682 34.566 26.979 1 22.66 ? C03 EOR 301 A 1 HETATM 11 C C04 EOR . . . B 2 6.057 33.555 25.334 1 22.88 ? C04 EOR 301 A 1 HETATM 12 C C05 EOR . . . B 2 6.911 32.585 24.833 1 22.33 ? C05 EOR 301 A 1 HETATM 13 C C06 EOR . . . B 2 6.379 31.438 24.201 1 31.05 ? C06 EOR 301 A 1 HETATM 14 C C08 EOR . . . B 2 6.008 29.449 23.175 1 28.88 ? C08 EOR 301 A 1 HETATM 15 C C16 EOR . . . B 2 0.053 34.337 23.819 1 26.13 ? C16 EOR 301 A 1 HETATM 16 C C17 EOR . . . B 2 -1.299 34.018 23.496 1 23.15 ? C17 EOR 301 A 1 HETATM 17 C C21 EOR . . . B 2 0.261 35.328 21.648 1 19.92 ? C21 EOR 301 A 1 HETATM 18 C C24 EOR . . . B 2 3.221 35.805 22.885 1 20.55 ? C24 EOR 301 A 1 HETATM 19 C C28 EOR . . . B 2 1.024 40.153 22.123 1 37.58 ? C28 EOR 301 A 1 HETATM 20 C C29 EOR . . . B 2 1.282 40.163 20.619 1 34.2 ? C29 EOR 301 A 1 HETATM 21 C C30 EOR . . . B 2 -0.326 39.487 22.412 1 25.71 ? C30 EOR 301 A 1 HETATM 22 C C31 EOR . . . B 2 0.986 41.596 22.614 1 26.89 ? C31 EOR 301 A 1 HETATM 23 N N02 EOR . . . B 2 6.664 34.717 25.956 1 29.33 ? N02 EOR 301 A 1 HETATM 24 N N15 EOR . . . B 2 0.822 34.123 24.926 1 18.28 ? N15 EOR 301 A 1 HETATM 25 N N18 EOR . . . B 2 -2.129 33.337 24.473 1 20.49 ? N18 EOR 301 A 1 HETATM 26 N N19 EOR . . . B 2 -1.801 34.346 22.312 1 24.12 ? N19 EOR 301 A 1 HETATM 27 N N23 EOR . . . B 2 2.058 35.161 23.481 1 23.5 ? N23 EOR 301 A 1 HETATM 28 N N26 EOR . . . B 2 1.997 37.959 22.768 1 21.59 ? N26 EOR 301 A 1 HETATM 29 O O07 EOR . . . B 2 7.013 30.324 23.624 1 30.8 ? O07 EOR 301 A 1 HETATM 30 O O09 EOR . . . B 2 4.768 30.065 23.414 1 24.89 ? O09 EOR 301 A 1 HETATM 31 S S13 EOR . . . B 2 3.456 34.625 25.853 1 31.31 ? S13 EOR 301 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #