data_6LRP # _model_server_result.job_id QoBhIiMdg36X7l7wv6putA _model_server_result.datetime_utc '2025-01-10 08:51:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6lrp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 6LRP # _exptl.entry_id 6LRP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 250.332 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15-PENTAOXAHEPTADECANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6LRP _cell.length_a 92.772 _cell.length_b 92.772 _cell.length_c 216.114 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6LRP _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_455 y-1/2,x+1/2,-z+1/2 0 1 0 1 0 0 0 0 -1 -46.386 46.386 108.057 3 'crystal symmetry operation' 10_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -92.772 0 0 4 'crystal symmetry operation' 16_445 -y-1/2,-x-1/2,-z+1/2 0 -1 0 -1 0 0 0 0 -1 -46.386 -46.386 108.057 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H26 O5' _chem_comp.formula_weight 250.332 _chem_comp.id P3G _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15-PENTAOXAHEPTADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C6 P3G sing 250 n n C5 H51 P3G sing 251 n n C5 H5 P3G sing 252 n n C5 H52 P3G sing 253 n n C6 O3 P3G sing 254 n n C6 H61 P3G sing 255 n n C6 H62 P3G sing 256 n n O3 C7 P3G sing 257 n n C7 C8 P3G sing 258 n n C7 H71 P3G sing 259 n n C7 H72 P3G sing 260 n n C8 O4 P3G sing 261 n n C8 H81 P3G sing 262 n n C8 H82 P3G sing 263 n n O4 C9 P3G sing 264 n n C9 C10 P3G sing 265 n n C9 H91 P3G sing 266 n n C9 H92 P3G sing 267 n n C10 O5 P3G sing 268 n n C10 H101 P3G sing 269 n n C10 H102 P3G sing 270 n n O5 C11 P3G sing 271 n n C11 C12 P3G sing 272 n n C11 H111 P3G sing 273 n n C11 H112 P3G sing 274 n n C12 O6 P3G sing 275 n n C12 H121 P3G sing 276 n n C12 H122 P3G sing 277 n n O6 C13 P3G sing 278 n n C13 C14 P3G sing 279 n n C13 H131 P3G sing 280 n n C13 H132 P3G sing 281 n n C14 O7 P3G sing 282 n n C14 H141 P3G sing 283 n n C14 H142 P3G sing 284 n n O7 C15 P3G sing 285 n n C15 C16 P3G sing 286 n n C15 H151 P3G sing 287 n n C15 H152 P3G sing 288 n n C16 H16 P3G sing 289 n n C16 H162 P3G sing 290 n n C16 H161 P3G sing 291 n n # _atom_sites.entry_id 6LRP _atom_sites.fract_transf_matrix[1][1] 0.010779 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010779 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004627 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 501 1 GOL GOL . C 3 P3G A 1 502 2 P3G 15P . D 4 HOH A 1 601 250 HOH HOH . D 4 HOH A 2 602 1 HOH HOH . D 4 HOH A 3 603 211 HOH HOH . D 4 HOH A 4 604 166 HOH HOH . D 4 HOH A 5 605 224 HOH HOH . D 4 HOH A 6 606 141 HOH HOH . D 4 HOH A 7 607 216 HOH HOH . D 4 HOH A 8 608 136 HOH HOH . D 4 HOH A 9 609 79 HOH HOH . D 4 HOH A 10 610 161 HOH HOH . D 4 HOH A 11 611 215 HOH HOH . D 4 HOH A 12 612 223 HOH HOH . D 4 HOH A 13 613 70 HOH HOH . D 4 HOH A 14 614 49 HOH HOH . D 4 HOH A 15 615 236 HOH HOH . D 4 HOH A 16 616 101 HOH HOH . D 4 HOH A 17 617 202 HOH HOH . D 4 HOH A 18 618 186 HOH HOH . D 4 HOH A 19 619 40 HOH HOH . D 4 HOH A 20 620 200 HOH HOH . D 4 HOH A 21 621 20 HOH HOH . D 4 HOH A 22 622 113 HOH HOH . D 4 HOH A 23 623 30 HOH HOH . D 4 HOH A 24 624 9 HOH HOH . D 4 HOH A 25 625 140 HOH HOH . D 4 HOH A 26 626 152 HOH HOH . D 4 HOH A 27 627 8 HOH HOH . D 4 HOH A 28 628 199 HOH HOH . D 4 HOH A 29 629 103 HOH HOH . D 4 HOH A 30 630 67 HOH HOH . D 4 HOH A 31 631 112 HOH HOH . D 4 HOH A 32 632 181 HOH HOH . D 4 HOH A 33 633 225 HOH HOH . D 4 HOH A 34 634 203 HOH HOH . D 4 HOH A 35 635 85 HOH HOH . D 4 HOH A 36 636 88 HOH HOH . D 4 HOH A 37 637 157 HOH HOH . D 4 HOH A 38 638 99 HOH HOH . D 4 HOH A 39 639 27 HOH HOH . D 4 HOH A 40 640 212 HOH HOH . D 4 HOH A 41 641 180 HOH HOH . D 4 HOH A 42 642 98 HOH HOH . D 4 HOH A 43 643 69 HOH HOH . D 4 HOH A 44 644 156 HOH HOH . D 4 HOH A 45 645 43 HOH HOH . D 4 HOH A 46 646 73 HOH HOH . D 4 HOH A 47 647 89 HOH HOH . D 4 HOH A 48 648 50 HOH HOH . D 4 HOH A 49 649 15 HOH HOH . D 4 HOH A 50 650 125 HOH HOH . D 4 HOH A 51 651 148 HOH HOH . D 4 HOH A 52 652 114 HOH HOH . D 4 HOH A 53 653 59 HOH HOH . D 4 HOH A 54 654 60 HOH HOH . D 4 HOH A 55 655 118 HOH HOH . D 4 HOH A 56 656 11 HOH HOH . D 4 HOH A 57 657 31 HOH HOH . D 4 HOH A 58 658 122 HOH HOH . D 4 HOH A 59 659 82 HOH HOH . D 4 HOH A 60 660 107 HOH HOH . D 4 HOH A 61 661 37 HOH HOH . D 4 HOH A 62 662 197 HOH HOH . D 4 HOH A 63 663 206 HOH HOH . D 4 HOH A 64 664 95 HOH HOH . D 4 HOH A 65 665 100 HOH HOH . D 4 HOH A 66 666 213 HOH HOH . D 4 HOH A 67 667 51 HOH HOH . D 4 HOH A 68 668 266 HOH HOH . D 4 HOH A 69 669 254 HOH HOH . D 4 HOH A 70 670 144 HOH HOH . D 4 HOH A 71 671 189 HOH HOH . D 4 HOH A 72 672 192 HOH HOH . D 4 HOH A 73 673 96 HOH HOH . D 4 HOH A 74 674 7 HOH HOH . D 4 HOH A 75 675 119 HOH HOH . D 4 HOH A 76 676 66 HOH HOH . D 4 HOH A 77 677 126 HOH HOH . D 4 HOH A 78 678 33 HOH HOH . D 4 HOH A 79 679 63 HOH HOH . D 4 HOH A 80 680 57 HOH HOH . D 4 HOH A 81 681 21 HOH HOH . D 4 HOH A 82 682 235 HOH HOH . D 4 HOH A 83 683 76 HOH HOH . D 4 HOH A 84 684 151 HOH HOH . D 4 HOH A 85 685 190 HOH HOH . D 4 HOH A 86 686 210 HOH HOH . D 4 HOH A 87 687 109 HOH HOH . D 4 HOH A 88 688 83 HOH HOH . D 4 HOH A 89 689 53 HOH HOH . D 4 HOH A 90 690 71 HOH HOH . D 4 HOH A 91 691 48 HOH HOH . D 4 HOH A 92 692 121 HOH HOH . D 4 HOH A 93 693 193 HOH HOH . D 4 HOH A 94 694 42 HOH HOH . D 4 HOH A 95 695 264 HOH HOH . D 4 HOH A 96 696 159 HOH HOH . D 4 HOH A 97 697 205 HOH HOH . D 4 HOH A 98 698 171 HOH HOH . D 4 HOH A 99 699 74 HOH HOH . D 4 HOH A 100 700 28 HOH HOH . D 4 HOH A 101 701 259 HOH HOH . D 4 HOH A 102 702 47 HOH HOH . D 4 HOH A 103 703 29 HOH HOH . D 4 HOH A 104 704 24 HOH HOH . D 4 HOH A 105 705 138 HOH HOH . D 4 HOH A 106 706 32 HOH HOH . D 4 HOH A 107 707 145 HOH HOH . D 4 HOH A 108 708 247 HOH HOH . D 4 HOH A 109 709 84 HOH HOH . D 4 HOH A 110 710 80 HOH HOH . D 4 HOH A 111 711 182 HOH HOH . D 4 HOH A 112 712 19 HOH HOH . D 4 HOH A 113 713 52 HOH HOH . D 4 HOH A 114 714 86 HOH HOH . D 4 HOH A 115 715 115 HOH HOH . D 4 HOH A 116 716 105 HOH HOH . D 4 HOH A 117 717 184 HOH HOH . D 4 HOH A 118 718 77 HOH HOH . D 4 HOH A 119 719 62 HOH HOH . D 4 HOH A 120 720 237 HOH HOH . D 4 HOH A 121 721 65 HOH HOH . D 4 HOH A 122 722 68 HOH HOH . D 4 HOH A 123 723 117 HOH HOH . D 4 HOH A 124 724 207 HOH HOH . D 4 HOH A 125 725 260 HOH HOH . D 4 HOH A 126 726 45 HOH HOH . D 4 HOH A 127 727 262 HOH HOH . D 4 HOH A 128 728 36 HOH HOH . D 4 HOH A 129 729 2 HOH HOH . D 4 HOH A 130 730 61 HOH HOH . D 4 HOH A 131 731 185 HOH HOH . D 4 HOH A 132 732 179 HOH HOH . D 4 HOH A 133 733 58 HOH HOH . D 4 HOH A 134 734 56 HOH HOH . D 4 HOH A 135 735 198 HOH HOH . D 4 HOH A 136 736 87 HOH HOH . D 4 HOH A 137 737 26 HOH HOH . D 4 HOH A 138 738 228 HOH HOH . D 4 HOH A 139 739 123 HOH HOH . D 4 HOH A 140 740 116 HOH HOH . D 4 HOH A 141 741 127 HOH HOH . D 4 HOH A 142 742 18 HOH HOH . D 4 HOH A 143 743 167 HOH HOH . D 4 HOH A 144 744 39 HOH HOH . D 4 HOH A 145 745 257 HOH HOH . D 4 HOH A 146 746 222 HOH HOH . D 4 HOH A 147 747 13 HOH HOH . D 4 HOH A 148 748 227 HOH HOH . D 4 HOH A 149 749 111 HOH HOH . D 4 HOH A 150 750 25 HOH HOH . D 4 HOH A 151 752 204 HOH HOH . D 4 HOH A 152 753 263 HOH HOH . D 4 HOH A 153 754 196 HOH HOH . D 4 HOH A 154 755 134 HOH HOH . D 4 HOH A 155 756 191 HOH HOH . D 4 HOH A 156 757 218 HOH HOH . D 4 HOH A 157 758 155 HOH HOH . D 4 HOH A 158 759 209 HOH HOH . D 4 HOH A 159 760 23 HOH HOH . D 4 HOH A 160 761 6 HOH HOH . D 4 HOH A 161 762 102 HOH HOH . D 4 HOH A 162 763 12 HOH HOH . D 4 HOH A 163 764 46 HOH HOH . D 4 HOH A 164 765 124 HOH HOH . D 4 HOH A 165 766 17 HOH HOH . D 4 HOH A 166 767 135 HOH HOH . D 4 HOH A 167 768 128 HOH HOH . D 4 HOH A 168 769 38 HOH HOH . D 4 HOH A 169 770 251 HOH HOH . D 4 HOH A 170 771 217 HOH HOH . D 4 HOH A 171 772 188 HOH HOH . D 4 HOH A 172 773 120 HOH HOH . D 4 HOH A 173 774 22 HOH HOH . D 4 HOH A 174 775 162 HOH HOH . D 4 HOH A 175 776 208 HOH HOH . D 4 HOH A 176 777 64 HOH HOH . D 4 HOH A 177 778 81 HOH HOH . D 4 HOH A 178 779 131 HOH HOH . D 4 HOH A 179 780 14 HOH HOH . D 4 HOH A 180 782 5 HOH HOH . D 4 HOH A 181 783 129 HOH HOH . D 4 HOH A 182 784 149 HOH HOH . D 4 HOH A 183 785 75 HOH HOH . D 4 HOH A 184 786 10 HOH HOH . D 4 HOH A 185 787 54 HOH HOH . D 4 HOH A 186 788 142 HOH HOH . D 4 HOH A 187 789 258 HOH HOH . D 4 HOH A 188 790 163 HOH HOH . D 4 HOH A 189 791 104 HOH HOH . D 4 HOH A 190 792 90 HOH HOH . D 4 HOH A 191 793 91 HOH HOH . D 4 HOH A 192 794 143 HOH HOH . D 4 HOH A 193 795 3 HOH HOH . D 4 HOH A 194 796 72 HOH HOH . D 4 HOH A 195 797 41 HOH HOH . D 4 HOH A 196 798 16 HOH HOH . D 4 HOH A 197 799 168 HOH HOH . D 4 HOH A 198 800 139 HOH HOH . D 4 HOH A 199 801 137 HOH HOH . D 4 HOH A 200 802 176 HOH HOH . D 4 HOH A 201 803 106 HOH HOH . D 4 HOH A 202 804 133 HOH HOH . D 4 HOH A 203 805 245 HOH HOH . D 4 HOH A 204 806 256 HOH HOH . D 4 HOH A 205 807 93 HOH HOH . D 4 HOH A 206 808 261 HOH HOH . D 4 HOH A 207 809 158 HOH HOH . D 4 HOH A 208 810 246 HOH HOH . D 4 HOH A 209 811 78 HOH HOH . D 4 HOH A 210 812 249 HOH HOH . D 4 HOH A 211 813 241 HOH HOH . D 4 HOH A 212 814 187 HOH HOH . D 4 HOH A 213 815 34 HOH HOH . D 4 HOH A 214 816 195 HOH HOH . D 4 HOH A 215 817 172 HOH HOH . D 4 HOH A 216 818 170 HOH HOH . D 4 HOH A 217 819 201 HOH HOH . D 4 HOH A 218 820 232 HOH HOH . D 4 HOH A 219 821 226 HOH HOH . D 4 HOH A 220 822 234 HOH HOH . D 4 HOH A 221 823 233 HOH HOH . D 4 HOH A 222 824 244 HOH HOH . D 4 HOH A 223 825 219 HOH HOH . D 4 HOH A 224 826 231 HOH HOH . D 4 HOH A 225 827 164 HOH HOH . D 4 HOH A 226 828 35 HOH HOH . D 4 HOH A 227 829 230 HOH HOH . D 4 HOH A 228 830 240 HOH HOH . D 4 HOH A 229 831 173 HOH HOH . D 4 HOH A 230 832 243 HOH HOH . D 4 HOH A 231 833 177 HOH HOH . D 4 HOH A 232 835 183 HOH HOH . D 4 HOH A 233 836 178 HOH HOH . D 4 HOH A 234 837 214 HOH HOH . D 4 HOH A 235 838 97 HOH HOH . D 4 HOH A 236 839 165 HOH HOH . D 4 HOH A 237 840 252 HOH HOH . D 4 HOH A 238 841 229 HOH HOH . D 4 HOH A 239 842 242 HOH HOH . D 4 HOH A 240 844 221 HOH HOH . D 4 HOH A 241 845 154 HOH HOH . D 4 HOH A 242 847 147 HOH HOH . D 4 HOH A 243 848 175 HOH HOH . D 4 HOH A 244 849 150 HOH HOH . D 4 HOH A 245 850 174 HOH HOH . D 4 HOH A 246 851 265 HOH HOH . D 4 HOH A 247 852 194 HOH HOH . D 4 HOH A 248 853 255 HOH HOH . D 4 HOH A 249 854 253 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 P3G . . . C 3 -10.894 -6.703 29.722 1 39.53 ? C5 P3G 502 A 1 HETATM 2 C C6 P3G . . . C 3 -11.964 -7.095 30.727 1 40.17 ? C6 P3G 502 A 1 HETATM 3 O O3 P3G . . . C 3 -12.671 -5.921 31.124 1 39.72 ? O3 P3G 502 A 1 HETATM 4 C C7 P3G . . . C 3 -13.05 -5.861 32.497 1 35.61 ? C7 P3G 502 A 1 HETATM 5 C C8 P3G . . . C 3 -12.961 -4.441 32.995 1 36.72 ? C8 P3G 502 A 1 HETATM 6 O O4 P3G . . . C 3 -13.74 -3.561 32.18 1 35.57 ? O4 P3G 502 A 1 HETATM 7 C C9 P3G . . . C 3 -13.072 -2.351 31.813 1 35.86 ? C9 P3G 502 A 1 HETATM 8 C C10 P3G . . . C 3 -12.065 -2.617 30.712 1 35.29 ? C10 P3G 502 A 1 HETATM 9 O O5 P3G . . . C 3 -12.476 -1.991 29.498 1 33.87 ? O5 P3G 502 A 1 HETATM 10 C C11 P3G . . . C 3 -11.743 -2.39 28.34 1 32.89 ? C11 P3G 502 A 1 HETATM 11 C C12 P3G . . . C 3 -12.645 -3.027 27.296 1 32.11 ? C12 P3G 502 A 1 HETATM 12 O O6 P3G . . . C 3 -12.433 -4.434 27.32 1 33.78 ? O6 P3G 502 A 1 HETATM 13 C C13 P3G . . . C 3 -13.273 -5.202 26.461 1 36.29 ? C13 P3G 502 A 1 HETATM 14 C C14 P3G . . . C 3 -13.019 -6.683 26.718 1 37.8 ? C14 P3G 502 A 1 HETATM 15 O O7 P3G . . . C 3 -14.131 -7.301 27.369 1 40.52 ? O7 P3G 502 A 1 HETATM 16 C C15 P3G . . . C 3 -14.692 -8.395 26.641 1 42.22 ? C15 P3G 502 A 1 HETATM 17 C C16 P3G . . . C 3 -13.868 -9.634 26.852 1 42.28 ? C16 P3G 502 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #